mRNA_S-dermatodea_contig1282.1724.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig1282.1724.1
Unique Name	mRNA_S-dermatodea_contig1282.1724.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: D8LK53_ECTSI (HTH La-type RNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK53_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 6.820e-96
Identity = 205/350 (58.57%), Postives = 230/350 (65.71%), Query Frame = 1

Query:   19 SGGHTKPSSSTPVKWTLVEAEPETPEGRRTKQQGYGRARAHGGAGXXXXAGNWRSGRDAGRXXXXXXFSGG-HRGNRRGGXXXXXXXTRHNQGXXXXXXXXXXXXXXXXXXXXXYVG-ATYYPSPQNFNEPNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPAAATFDGALEQGTGDGKAETEGAPKADETNALAPQDDAVPPAKEDSAETTTASAEAVAEDTTEAGPASENGALVDGKTELTPTAPAWTPGGDAKANAVEEQ 1062
            S G+ KPS+STPVKWTLVEA  ETPEGRR K Q +   R   GA      GNW  GRD   XXXXXX     +RG RRGG       +R+NQG XXXXXXXX            YVG ATYYP+  N    +FEEQ++YMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGV+L+DI+AGILASD LQVDTENETMRM+EGWEVWLLPNQATGKQGVPRYIKVDPA    D    T    +   T    A     P A++T     +D      K++    T   AE   + ++E G  S   A    KTELTP APAWTP G A  +AV+EQ
Sbjct:    5 SSGNAKPSASTPVKWTLVEAVAETPEGRRHKHQSHAGQRKGPGARGSGYTGNWGQGRDGXXXXXXXXXXXXXNRGQRRGGGAG----SRNNQGQXXXXXXXXG-----------YVGGATYYPTQANVGAESFEEQKAYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDITAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGVPRYIKVDPAVSEADRVNGTEPSGIPAQTTQDAASAGDVPGAEDTQTSLKEDSTAGAEKKEGDSVTGPVAEEEQQRSSEKGQVSHEDAA---KTELTPLAPAWTPVG-ASTDAVQEQ 335

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A836CAE4_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.880e-34
Identity = 71/138 (51.45%), Postives = 93/138 (67.39%), Query Frame = 1

Query:  415 EQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDP--------------AAVSEDPAA-ATFDGA 783
            E +      AV+Q+E+YF+V NLC D+FMRSYMD EGYIP+AFVANFPG A  G +  DI   + +S+ML+ D  NETMR++EGW++W+LPN A+G  GVPRYIK+                AA SE+P+A AT +GA
Sbjct:    5 EAKKMAAEYAVKQMEWYFSVHNLCSDVFMRSYMDTEGYIPVAFVANFPGCASLGAEFTDILEALKSSEMLEFDEANETMRLREGWDMWILPN-ASGGLGVPRYIKLSEDEAAKIAAQQEAQAAAKSEEPSAEATMNGA 141

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A7S1UC17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC17_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.610e-25
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 1

Query:  403 PNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKV 732
            P   E R      AVR IE  F+  +LC D ++R  MD EGYIP+AFVAN+P VA++G   +D+ +GI +S++L++D ENETMR++E W+ WL P+   G  G PRY+KV
Sbjct:   72 PARHENRHLFAASAVRAIEMTFSPNHLCTDEWLRQNMDVEGYIPVAFVANYPHVAQYGALYEDLLSGIASSEILELDAENETMRLRENWQQWLFPD-GKGGMGCPRYVKV 180

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: K8ZBX0_NANGC (Rna-binding la domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBX0_NANGC)

HSP 1 Score: 112 bits (281), Expect = 4.260e-25
Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 1

Query:  367 ATYYPSPQNFNEP--------------NFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGIL-ASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDP 738
              Y+P PQ    P              N  E R Y+ ++AV+QIE+YF+V+NLCRD ++R+++DEEG++P+A + NFP VA F  D  +I   +  AS +L+ D  NET+R+KE    WLLPN   G  G PR++K  P
Sbjct:   24 GVYFPQPQPQYLPAHIGTAVRSSLMTMNALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLALICNFPTVASFAADYSEIVKTLQEASSVLEYDEANETLRLKEKATAWLLPN-GRGGMGCPRWLKQAP 161

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A7R9U3W9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3W9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.800e-25
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 1

Query:  403 PNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAA-VSEDPAAATFDG 780
            P   E R+ +   AVR IE  F+  +LC D F+R +MD  GY+P+A VAN+  VA++G   +D+ AG+  S++LQ+D ENET+R++E WE WL P+   G  G PRY+KV P     +D + +T DG
Sbjct:  220 PASNENRTMLAASAVRAIEMTFSPNHLCTDEFLRQHMDVAGYVPVALVANYSHVAQYGALYEDLLAGLANSELLQLDAENETVRLRENWEQWLFPD-GKGGMGCPRYVKVSPVPPTDQDASGSTADG 345

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A4D9CXU2_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXU2_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.390e-23
Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 1

Query:  367 ATYYPSPQNFNEP--------------NFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGIL-ASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDP 759
              Y+P PQ    P              N  E R Y+ ++AV+QIE+YF+V+NLCRD ++R+++DEEG++P+AF+ NFP VA F  D  +I   +   S +L+ D  NET+R+KE    WLLPN   G  G PR++K  P    + P
Sbjct:  266 GVYFPRPQPQYLPAHIGTAVRSSLMTMNALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLAFICNFPTVASFAADYLEIVKTLQEVSSVLEYDEANETLRLKEKATAWLLPN-GRGGVGCPRWLKQAPDTPPQQP 410

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A2P4X4J6_9STRA (La domain family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4J6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.320e-22
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 1

Query:  442 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPA 762
            A  QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F  V     D + +   +  S+ +++D +NE +R++EGW+ W+ PN A G  GVPRYIKV   A +E+PA
Sbjct:  121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETIELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKV---AENEEPA 223

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: V9E4H7_PHYPR (HTH La-type RNA-binding domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9E4H7_PHYPR)

HSP 1 Score: 103 bits (257), Expect = 4.200e-22
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1

Query:  358 YVGATYYPSPQNFNEPNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKV 732
            YV   Y P+P                  A  QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F  V     D + +   +  S+ +++D +NE +R+++GWE W+ PN A G  GVPRYIK+
Sbjct:  110 YVNGVYVPTPDV----------KVTAQWAKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETVELDEQNEKIRLRDGWEKWVWPN-AVGGYGVPRYIKL 223

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A225VMU3_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMU3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.910e-22
Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 1

Query:  442 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSE 753
            A  QIEFYFT +NL RDIF+R +MD +G++P+AFV +F  V     D + +   +  SD +++D +NE +R++EGW+ W+ PN A G  GVPRYIK++     E
Sbjct:  121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKHSDSVELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKLENETADE 223

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BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: H3GP14_PHYRM (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP14_PHYRM)

HSP 1 Score: 102 bits (254), Expect = 9.110e-22
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 1

Query:  442 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPAAA 768
            A  QIEFYFT +NL RDIF+R +MD +G++P+AFV +F  V     D + +   +  SD +++D +NE +R+++GW+ W+ PN A G  GVPRYIK+   A +E PA A
Sbjct:  122 AKNQIEFYFTNDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKNSDTMELDEQNEKIRLRQGWQTWVWPN-ADGGYGVPRYIKL---AENETPAEA 226

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LK53_ECTSI	6.820e-96	58.57	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A836CAE4_9STRA	1.880e-34	51.45	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A7S1UC17_9STRA	2.610e-25	48.18	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
K8ZBX0_NANGC	4.260e-25	41.73	Rna-binding la domain protein (Fragment) n=2 Tax=N...	[more]
A0A7R9U3W9_9STRA	4.800e-25	44.09	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A4D9CXU2_9STRA	1.390e-23	40.41	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A2P4X4J6_9STRA	1.320e-22	47.66	La domain family n=1 Tax=Phytophthora palmivora va...	[more]
V9E4H7_PHYPR	4.200e-22	40.80	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A225VMU3_9STRA	8.910e-22	45.19	HTH La-type RNA-binding domain-containing protein ...	[more]
H3GP14_PHYRM	9.110e-22	45.87	HTH La-type RNA-binding domain-containing protein ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig1282	contig	S-dermatodea_contig1282:3913..6797 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	306.6
Seed ortholog evalue	1.6e-80
Seed eggNOG ortholog	2880.D8LK53
KEGG ko	ko:K18757
EggNOG free text desc.	La ribonucleoprotein domain family member
EggNOG OGs	COG5193@1,KOG2590@2759
COG Functional cat.	JO
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03019
Hectar predicted targeting category	other localisation
Ec32 ortholog description	RNA-binding protein Lupus La
Ec32 ortholog	Ec-06_008220.1
Exons	4
Model size	1137
Cds size	1137
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig1282.1724.1	prot_S-dermatodea_contig1282.1724.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig1282 3913..6797 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924263.4983969-CDS-S-dermatodea_contig1282:3912..4257	1622924263.4983969-CDS-S-dermatodea_contig1282:3912..4257	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 3913..4257 -
1694079134.7267892-CDS-S-dermatodea_contig1282:3912..4257	1694079134.7267892-CDS-S-dermatodea_contig1282:3912..4257	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 3913..4257 -
1622924263.509797-CDS-S-dermatodea_contig1282:4697..4862	1622924263.509797-CDS-S-dermatodea_contig1282:4697..4862	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 4698..4862 -
1694079134.7363925-CDS-S-dermatodea_contig1282:4697..4862	1694079134.7363925-CDS-S-dermatodea_contig1282:4697..4862	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 4698..4862 -
1622924263.5202892-CDS-S-dermatodea_contig1282:5423..5528	1622924263.5202892-CDS-S-dermatodea_contig1282:5423..5528	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 5424..5528 -
1694079134.7443733-CDS-S-dermatodea_contig1282:5423..5528	1694079134.7443733-CDS-S-dermatodea_contig1282:5423..5528	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 5424..5528 -
1622924263.5286772-CDS-S-dermatodea_contig1282:6275..6797	1622924263.5286772-CDS-S-dermatodea_contig1282:6275..6797	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 6276..6797 -
1694079134.7589488-CDS-S-dermatodea_contig1282:6275..6797	1694079134.7589488-CDS-S-dermatodea_contig1282:6275..6797	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig1282 6276..6797 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig1282:3913..6797-
coding sequence from alignment at S-dermatodea_contig1282:3913..6797-

protein sequence of mRNA_S-dermatodea_contig1282.1724.1

>prot_S-dermatodea_contig1282.1724.1 ID=prot_S-dermatodea_contig1282.1724.1|Name=mRNA_S-dermatodea_contig1282.1724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=379bp
MASQGASGGHTKPSSSTPVKWTLVEAEPETPEGRRTKQQGYGRARAHGGA
GGSGSAGNWRSGRDAGRGRGGQGFSGGHRGNRRGGGGGGSGGTRHNQGQG
RGRGYAYGGSGGGGGGGGGYVGATYYPSPQNFNEPNFEEQRSYMTNLAVR
QIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISA
GILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVS
EDPAAATFDGALEQGTGDGKAETEGAPKADETNALAPQDDAVPPAKEDSA
ETTTASAEAVAEDTTEAGPASENGALVDGKTELTPTAPAWTPGGDAKANA
VEEQPSASESSPAVGPPGNEAGCSPSGTD

mRNA from alignment at S-dermatodea_contig1282:3913..6797-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig1282.1724.1 ID=mRNA_S-dermatodea_contig1282.1724.1|Name=mRNA_S-dermatodea_contig1282.1724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2885bp|location=Sequence derived from alignment at S-dermatodea_contig1282:3913..6797- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCCAGTCAGGGTGCTAGTGGTGGACACACCAAGCCCTCTTCCTCAAC
ACCCGTCAAATGGACTCTCGTGGAGGCCGAGCCAGAGACACCCGAGGGAC
GGCGCACTAAGCAGCAAGGGTACGGGAGGGCCAGAGCCCACGGCGGGGCA
GGAGGATCAGGTTCTGCCGGCAACTGGCGATCGGGACGGGATGCGGGACG
GGGACGGGGGGGGCAAGGGTTTTCAGGTGGACACCGTGGTAACCGACGAG
GGGGAGGGGGTGGAGGAAGTGGAGGCACGAGGCACAACCAAGGCCAGGGA
CGAGGGAGAGGCTATGCATACGGCGGCAGCGGAGGAGGAGGAGGAGGAGG
AGGAGGTTACGTGGGGGCAACGTACTACCCCAGCCCTCAAAACTTCAACG
AACCGAACTTCGAGGAGCAGAGGTCATACATGACCAACTTGGCGGTCAGG
CAGATTGAGTTTTACTTCACCGTGGAGAATCTTTGTCGAGACATCTTCAT
GCGGTCCTACATGGACGAGGAGGTGATGGCTGTTTCTGAACCGCTTGCGC
CGGTACGCCGTTCAACCACACAACCCCCCCCTCTCAGCGTCTAAGGTCCG
CACTATCAACAGTAGCCCGGGTCCACGTCGCTCTCTGGATGTGAAGAACG
GGCTTAGGTATAGATATTGGCTTCGAACGCCAGTGTATCGTGAGATCGTG
CTACCGTTATGTGTATGTGCAAAGGTATGCTTGTTAAGCAAAACACTCCT
GCTGTACCTTATTCACCAGGTTGAGGTTTTGGATGGTTACCCACCCAGGA
GCCAGGAGCGCCTCAAATCGCTTCATGCGCTCCACGCACGCGTTCCACCA
TGCGTGCATTCCTCACGCCGTGGCCGTTGGAAAGCCTGGTAGCACATCGT
GATCCGCATGTGCCCGTGTGCTATCGCGTACCAGGACGCTTCTGCTTTTG
GTTTCTACGTGTAGTTGTATGTTGACATGCGACACGTGACATTTTGCAAC
GGTATGACAACAACCCCAGTGCCAATATAGCAAGCAGATCCACTCCCTAA
CGACACGGGCACTTGGTGTCAATGGAACGATAGGCGAAGGAGTTCGATAG
ACGCAGTGGAGTACGTTGTTGCGCCTACCACCATAATCGCCTGCATCGAT
CGGACGCTCGATGTTATGCTAGCCACGCTACTCGACCAACTGATGCCGCT
ATCTGTTGCGGTCTGGTACTCTTGCCGTATCGCATTAAATATGAAAATTC
CACATTCCGTTTTCTACAGGGATACATCCCCATCGCGTTCGTCGCAAACT
TTCCTGGGGTGGCGCGGTTTGGAGTGGATCTGCAGGATATCTCGGCGGGC
ATTCTAGCGAGCGACATGTTACAGGTTTGCTGTTTTGATGGTTGAAAAAT
GACATCTTATTAATGAATGCAGCAATGACCGATTGTGTATATTGATTTTA
GACAAGGAGGCTGTCTGATGCCAAACAACTTGATCTTTGTCTTGAGCGTT
TTTTTTTTAACTAAAAAAAGCGAAAACACAGCAGCGACACGTACAGTAGC
TCGACCGCGTGCGACCTCCGTGTCGCCTTCCGTAATCATATCGTCCTGCC
AACGCACACCTCACACGGGCGTAGCCGTGGCTACCCACTAGTTTGTAAGA
AGGGCAGTTGGTTGATGAGGGATTGATGGGGTCAACATGTTCCTGTAGGG
TATTCGAAAAATGAAAATACCCCTACGGCCGCACGGCTGTCTATATTGAC
GATTTTAGACTTAAGGGTCCGCTTGCGCCATGATTGAGGTGTGTGTACAT
GGACCTCACCCGCGTGGTTGACGGCTCACTCGTGTAGGATGTTGCGCAGG
CCATACCTGTTGCATGCCTGGCAGCGCAGCGTTCAACTTCAAATACCGTG
TGCACGACCGTGGTGTTTCGATTCGATGCGAACAGGTCGATACCGAGAAC
GAAACGATGCGCATGAAGGAGGGATGGGAGGTGTGGCTTCTCCCGAATCA
AGCTACTGGAAAACAAGGGGTGCCACGGTATATCAAGGTCGACCCTGCTG
CAGTTTCCGAAGATCCTGCCGCTGCAACATTTGACGGAGCTCTAGAGCAG
GTCGGGGCACTCTCCACTGTAACGTAAATATGTCGTCCAGGGTCCATGTC
CCGCATGGCGGTTGTGTGCTGATGTGCTGATCCCTGTGGAACTACAGTGA
CACGTTTCTCTTCGAGCCATGTTAACGAGTGTCTACAGAGCAGTGTCACG
CTGAAAGTACTTGAATTGCCAAGCATGCCTGGGGAAGGCGCCTCCTCAAG
GAAGGTTTCAATACCGTTGGATCGCGGGTGCGGGCGTGCCCTCAGCGTGC
CATACAAAATTTGGTTCCCCTCTCCTGCCCTGTTCCTGAAAATGTTGTCA
TACTAACCTGTTCTTGGTACATAACGTGCTGGGCTTAGCGTGTTTCCACG
GTATACCTTACACACGCAACCTAACGCCACGCCCGTGTTGCTGCTGGACA
TGACGCGCAGACTTCGCAGAGTACGCAACAACGAAGCGAGGGTACCGGGG
ACGGTAAAGCAGAGACCGAAGGAGCACCCAAGGCGGACGAAACAAACGCG
TTAGCGCCACAGGACGACGCGGTTCCTCCTGCCAAAGAGGATTCGGCAGA
GACGACCACAGCGTCCGCGGAGGCAGTCGCCGAGGACACAACAGAGGCAG
GGCCGGCAAGTGAGAACGGCGCGCTGGTTGATGGCAAGACGGAGTTGACA
CCGACAGCACCTGCTTGGACACCTGGCGGTGATGCTAAGGCAAACGCCGT
CGAAGAGCAACCATCGGCTTCAGAGAGCTCCCCGGCTGTCGGACCACCTG
GCAACGAGGCAGGGTGCTCTCCTAGCGGTACGGAT

Coding sequence (CDS) from alignment at S-dermatodea_contig1282:3913..6797-

>mRNA_S-dermatodea_contig1282.1724.1 ID=mRNA_S-dermatodea_contig1282.1724.1|Name=mRNA_S-dermatodea_contig1282.1724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2274bp|location=Sequence derived from alignment at S-dermatodea_contig1282:3913..6797- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCCAGTCAGGGTGCTAGTGGTGGACACACCAAGCCCTCTTCCTCAAC
ACCCGTCAAATGGACTCTCGTGGAGGCCGAGCCAGAGACACCCGAGGGAC
GGCGCACTAAGCAGCAAGGGTACGGGAGGGCCAGAGCCCACGGCGGGGCA
GGAGGATCAGGTTCTGCCGGCAACTGGCGATCGGGACGGGATGCGGGACG
GGGACGGGGGGGGCAAGGGTTTTCAGGTGGACACCGTGGTAACCGACGAG
GGGGAGGGGGTGGAGGAAGTGGAGGCACGAGGCACAACCAAGGCCAGGGA
CGAGGGAGAGGCTATGCATACGGCGGCAGCGGAGGAGGAGGAGGAGGAGG
AGGAGGTTACGTGGGGGCAACGTACTACCCCAGCCCTCAAAACTTCAACG
AACCGAACTTCGAGGAGCAGAGGTCATACATGACCAACTTGGCGGTCAGG
CAGATTGAGTTTTACTTCACCGTGGAGAATCTTTGTCGAGACATCTTCAT
GCGGTCCTACATGGACGAGGAGATGGCCAGTCAGGGTGCTAGTGGTGGAC
ACACCAAGCCCTCTTCCTCAACACCCGTCAAATGGACTCTCGTGGAGGCC
GAGCCAGAGACACCCGAGGGACGGCGCACTAAGCAGCAAGGGTACGGGAG
GGCCAGAGCCCACGGCGGGGCAGGAGGATCAGGTTCTGCCGGCAACTGGC
GATCGGGACGGGATGCGGGACGGGGACGGGGGGGGCAAGGGTTTTCAGGT
GGACACCGTGGTAACCGACGAGGGGGAGGGGGTGGAGGAAGTGGAGGCAC
GAGGCACAACCAAGGCCAGGGACGAGGGAGAGGCTATGCATACGGCGGCA
GCGGAGGAGGAGGAGGAGGAGGAGGAGGTTACGTGGGGGCAACGTACTAC
CCCAGCCCTCAAAACTTCAACGAACCGAACTTCGAGGAGCAGAGGTCATA
CATGACCAACTTGGCGGTCAGGCAGATTGAGTTTTACTTCACCGTGGAGA
ATCTTTGTCGAGACATCTTCATGCGGTCCTACATGGACGAGGAGGGATAC
ATCCCCATCGCGTTCGTCGCAAACTTTCCTGGGGTGGCGCGGTTTGGAGT
GGATCTGCAGGATATCTCGGCGGGCATTCTAGCGAGCGACATGTTACAGG
GATACATCCCCATCGCGTTCGTCGCAAACTTTCCTGGGGTGGCGCGGTTT
GGAGTGGATCTGCAGGATATCTCGGCGGGCATTCTAGCGAGCGACATGTT
ACAGGTCGATACCGAGAACGAAACGATGCGCATGAAGGAGGGATGGGAGG
TGTGGCTTCTCCCGAATCAAGCTACTGGAAAACAAGGGGTGCCACGGTAT
ATCAAGGTCGACCCTGCTGCAGTTTCCGAAGATCCTGCCGCTGCAACATT
TGACGGAGCTCTAGAGCAGGTCGATACCGAGAACGAAACGATGCGCATGA
AGGAGGGATGGGAGGTGTGGCTTCTCCCGAATCAAGCTACTGGAAAACAA
GGGGTGCCACGGTATATCAAGGTCGACCCTGCTGCAGTTTCCGAAGATCC
TGCCGCTGCAACATTTGACGGAGCTCTAGAGCAGGGTACCGGGGACGGTA
AAGCAGAGACCGAAGGAGCACCCAAGGCGGACGAAACAAACGCGTTAGCG
CCACAGGACGACGCGGTTCCTCCTGCCAAAGAGGATTCGGCAGAGACGAC
CACAGCGTCCGCGGAGGCAGTCGCCGAGGACACAACAGAGGCAGGGCCGG
CAAGTGAGAACGGCGCGCTGGTTGATGGCAAGACGGAGTTGACACCGACA
GCACCTGCTTGGACACCTGGCGGTGATGCTAAGGCAAACGCCGTCGAAGA
GCAACCATCGGCTTCAGAGAGCTCCCCGGCTGTCGGACCACCTGGCAACG
AGGCAGGGTGCTCTCCTAGCGGTACGGATGGTACCGGGGACGGTAAAGCA
GAGACCGAAGGAGCACCCAAGGCGGACGAAACAAACGCGTTAGCGCCACA
GGACGACGCGGTTCCTCCTGCCAAAGAGGATTCGGCAGAGACGACCACAG
CGTCCGCGGAGGCAGTCGCCGAGGACACAACAGAGGCAGGGCCGGCAAGT
GAGAACGGCGCGCTGGTTGATGGCAAGACGGAGTTGACACCGACAGCACC
TGCTTGGACACCTGGCGGTGATGCTAAGGCAAACGCCGTCGAAGAGCAAC
CATCGGCTTCAGAGAGCTCCCCGGCTGTCGGACCACCTGGCAACGAGGCA
GGGTGCTCTCCTAGCGGTACGGAT