mRNA_S-dermatodea_contig9141.17216.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9141.17216.1
Unique NamemRNA_S-dermatodea_contig9141.17216.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 4.820e-60
Identity = 167/371 (45.01%), Postives = 214/371 (57.68%), Query Frame = 1
Query:    1 LAGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*----ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAP-----AAGGGGGEDVVPVQV-DEEMKSIWTSVAIPSAIGTAAA--NGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRC-DGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
            LA +L   I+       E  LAAGAS++G SE+  RP++ AA    + + + LI R ADVD G+   +    G  V  KG RALH A+    V V R LL+AGADP +AN +G+TPLM  C  ED     +RA MA  XXXXXXXXXXXXXXX  AL +AA  D +++ID+LL KAP TL        TPL+  A  G   AVS LLS G +      +       AA     ++VV V + D  MK+I  +  IP A+G AA+   G A I++MLL+ EG E++ HWA+  +     LH+AV  G ++AT VLLAAGADE     DG+ A E      P     PA + A +RML RGPA+RARSWAWPA
Sbjct:  110 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPA 480          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 5.460e-60
Identity = 168/371 (45.28%), Postives = 213/371 (57.41%), Query Frame = 1
Query:    1 LAGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*----ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAP-----AAGGGGGEDVVPVQV-DEEMKSIWTSVAIPSAIGTAAA--NGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRC-DGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
            LA +L   I+       E  LAAGAS++G SE+  RP++ AA  G + +   LI R A+VD G+   +    G  V  KG RALH A+    V V R LL+AGADP +AN +G+TPLM  C  ED     +RA MA  XXXXXXXXXXXXXXX  AL +AA  D +D+ID+LL KAP TL        TPL+  A  G   AVS LLS G +      +       AA     ++VV V + D  M++I     IP A+G AA+   G A I++MLL+ EG E++ HWA+  +     LH AV  G ++AT VLLAAGADE     DG+ A E      P     PA + A +RMLARGPA+RARSWAWPA
Sbjct:  118 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPA 488          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 7.770e-47
Identity = 138/370 (37.30%), Postives = 186/370 (50.27%), Query Frame = 1
Query:   13 LNLSIKNGVMRDAEAMLAAGASIEGCSEIGVR--PLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVR---CGRVKVLRELLRAGADPSAANEEGMTPLMSACGT--ED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGD-TTPLFYGANQGHKNAVSRLLSEGVKNQRMR---HDAP--AAGGGGGEDVVPVQVDEE-MKSIWTSVAI-PSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFA-GYLALHNAVRQGQLAATSVLLAAGADE-RTRCDGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWP 1071
            L + ++NG  R  E  LAAGASI+G    G    P+V AA  G  ++ KFL+ +GAD+++   R    P        G RA+H AV     G +  LREL++AGAD +  N +G TPLM AC    E  ER  +A                   ALH+AA   +  +I  LLSK   +  ++A  D  TPL       H   VS LLS G   + ++   +  P  +A   G E ++ +   E  M ++    A+ P+++  A   G ARIL++LLA EG+E+QEHWA+     G   ++ A   G LA   VLLAAGADE  T  DG  A E    Q+P     P    A  R L RGPA+RARSWAWP
Sbjct:    9 LLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRPGAFP-------SGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWP 371          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 2.290e-39
Identity = 149/369 (40.38%), Postives = 198/369 (53.66%), Query Frame = 1
Query:   25 IKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVD--AGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ER---AAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPAAGGG--------GGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFA-GYLALHNAVRQGQLAATSVLLAAGADERTRCDG--KTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPARTT 1083
            ++ G ++ A  ML AGA+ +G SE    PL  AA  G + I K LI  GAD+D  +   +      G +    G   LH A+    +  LR LL AGADP+ A+ +G TPLM  C      +       XXXXXXXXXXXXXXXXXX ALH AA  +  D++ +LLS+AP+T+        T L Y A++G + AVS LLS G ++        A G G        G E VV V +D  ++++   +A+  A+  +    + RILQMLL VEGE+K+  WA+     G  ALH A     L A S+LL AGADE T  +G  K AS    + +P     P    A  R+L RGPAFRARSWAW A ++
Sbjct:   14 VEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLF---ANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGT-ANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESS 378          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.440e-35
Identity = 117/373 (31.37%), Postives = 181/373 (48.53%), Query Frame = 1
Query:   10 KLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPA---AGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRCD-GKTASEAAESQM-PFAANGPAIQRATIRMLARGPAFRARSWAWPARTTSGAGGGVAEV 1113
            +L + ++ G +   + +LA GA+++G  E+   P++ AA  G+ A+ K LI++GAD++  A               G RA+H A+       L  LL AGAD ++ +  G TPLM     +    A +A                   A+H AA L + +V+ ++L+  P+ L  + +   TP+   A +G + AV  LLS G  +  +     A   A  GG   +V + ++  +  +    AIP++IG A     A+IL+ML++ EGEE +  WA+        LH A     + A  VLL+AGA E      GK ASE     + P A   P  + A +RML RGPA+RARS+ WP   T   G G ++V
Sbjct:   10 RLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLETEARFPA-----------GSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALADT--GALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP---TLDGGNGTSDV 366          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 9.660e-35
Identity = 110/317 (34.70%), Postives = 154/317 (48.58%), Query Frame = 1
Query:   22 SIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPV-GGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTE--D*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGA------------NQGHKNAVSRLLSEGVKNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSG--FAGYLALHNAVRQGQLAATSVLLAAGA 921
            S+  G +   +A+LAAGAS++G  ++   PL  AA  G L +T  LI RGA +D GAPR VH+ + G +   KG R +H A+  G+ +  R L+RAGADP+ AN +G TPLMSAC  +     RA++                    A+H+AA     ++IDML +KAPATL+       TPL   A                               R R     A      +VV V +D  +  I +SV   +AI +A     AR+L  L++  GEE+++  + +G  F+    LH AV Q     TSVLLAAGA
Sbjct:   10 SVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDN-LDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKSLAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 4.900e-26
Identity = 114/403 (28.29%), Postives = 168/403 (41.69%), Query Frame = 1
Query:    4 AGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTK-------GDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACG------TED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPL-----FYGANQGHKNAVSRLLSEGVKNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKS-----------GFA----------------GYLALHNAVRQGQLAATSVLLAAGA-DERTRCDGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
            +G+L  ++ +G ++D   MLAAGAS+    E  + P+  AA +GH+ I K L+  GA+++A     V    G    T        G  ALH A   G+V+ +  LL+ GA+P++++  G+TP+M AC            +A M                    A+H+AA    + V+++LLSKAP+TL H      TPL                                                      +++    AI  A+ T+   G+  +L +LL VEG+EKQE WA             G A                G   LH A +   + A  VLL+AGA   +    GK A +A         NG +++ A   +L +GPAFRARSWAWPA
Sbjct:    8 SGQLMNALVHGRLKDVTRMLAAGASLRASREENIHPMAVAAAHGHVHIIKALVRSGAEIEATCTSRVKSD-GYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVVELLLSKAPSTLNHATHKGFTPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAMRTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAI-GVYHHERNG-SVEAAVRALLLKGPAFRARSWAWPA 407          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.420e-25
Identity = 102/332 (30.72%), Postives = 155/332 (46.69%), Query Frame = 1
Query:  133 GHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPA---AGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERT-RCDGKTASEAAESQM-PFAANGPAIQRATIRMLARGPAFRARSWAWPARTTSGAGGGVAEV 1113
            G+ A+ K LI++GA+++  A               G RA+H A+       L  LL AGAD ++ +  G TPLM     +    A +A                   A+H AA L + +V+ ++L+  P+ L  + +   TP+   A +G + AV  LLS G  +  +     A   A  GG   +V + ++  +  +    AIP++IG A     A+IL+ML++ EGE+ +  WA+        LH A     +    VLL+AGA E      GK A E     + P A   P  + A +RML RGPA+RARS+ WP   T   G G ++V
Sbjct:  106 GNTAMLKLLISKGANLETEARFPA-----------GSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALADT--GALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWP---TLDGGNGTSDV 421          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.920e-23
Identity = 112/347 (32.28%), Postives = 156/347 (44.96%), Query Frame = 1
Query:  121 AAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVST-----KGDRALHFAVRCGRVKVLRELL-RAGADPSAANEEGMTPLMSACGTED*E---RAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQR--MRHDAPAAGG--GGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKS--GFAGYLALHNAVRQGQLAATSVLLAAGADER-TRCDGKTASEAAES-------------QMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
            AAV+    I + LI RGA V+AG           VV++     +G+ A H A+   +   L +LL RAGADPSA N+ G+TPLM     E        A+                     LH A ++ + + I  +L+ +PA L  IA    + L+   N+GH + VS LLS G K+ R  +R   P A     G ED+V + +          +A   A+  A      +IL+M+L + GEE    WA S  G AG L LH +      A+ S LLAAGA+E  T   G+   +   +             + P     P  +    R + R PAFRARSWAWPA
Sbjct:    2 AAVHAQTEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEPPGPWLECALEVLIKAGVNPDQVDAEGWTAFLH-AVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLANLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSL-LHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPA 346          
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LMB2_ECTSI (Ankyrin repeat-containing protein 10_01 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB2_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.360e-19
Identity = 81/242 (33.47%), Postives = 118/242 (48.76%), Query Frame = 1
Query:  454 ALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGV--------KNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAK---------------------SGFAGYLALHNAVRQGQLAATSVLLAAGADERTRCD--GKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPARTTS 1086
            A+H+AA    + V+++LLSKAP+TL +  +   +PL   A QG ++ +S LLS G         K     H+A   G G   + V   ++  ++++    AI  A+  +   GY  IL+MLL VEG EKQE WA                      + F     LH A +   + A  +LL+AGAD  T CD  GK A +   S +P      +++ A  +ML +GPAFR RS AWP  T +
Sbjct:   38 AIHFAAARCETQVVELLLSKAPSTLNNADNHGYSPLGAAALQGRESTLSLLLSAGASDRIVWATKGVSALHEAIGIGKG---NSVRFLLENGLEAVGGLPAIAGAMAVSVWYGYIDILEMLLNVEGGEKQEVWANQHVYFAHDGSLLRGVPGPTMATKFEWLPILHYAAKYCSIPALRILLSAGADTET-CDLKGKLAVDHIGSLLPDDKRNGSMEAAVQQMLQKGPAFRVRSRAWPDTTAT 275          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LSK8_ECTSI4.820e-6045.01Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE5.460e-6045.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK4_ECTSI7.770e-4737.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDZ2_ECTSI2.290e-3940.38Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JK53_9PHAE4.440e-3531.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVG9_ECTSI9.660e-3534.70Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
D8LMA6_ECTSI4.900e-2628.29Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G4M4_ECTSI2.420e-2530.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLL0_ECTSI2.920e-2332.28Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB2_ECTSI1.360e-1933.47Ankyrin repeat-containing protein 10_01 n=1 Tax=Ec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9141contigS-dermatodea_contig9141:381..1499 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.6
Seed ortholog evalue9.8e-31
Seed eggNOG ortholog2880.D8LSK8
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Hectar predicted targeting categoryother localisation
Exons1
Model size1119
Cds size729
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925389.5660548-CDS-S-dermatodea_contig9141:380..11091622925389.5660548-CDS-S-dermatodea_contig9141:380..1109Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9141 381..1109 -
1694079900.6909916-CDS-S-dermatodea_contig9141:380..11091694079900.6909916-CDS-S-dermatodea_contig9141:380..1109Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9141 381..1109 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925389.5781636-UTR-S-dermatodea_contig9141:1109..14991622925389.5781636-UTR-S-dermatodea_contig9141:1109..1499Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9141 1110..1499 -
1694079900.711282-UTR-S-dermatodea_contig9141:1109..14991694079900.711282-UTR-S-dermatodea_contig9141:1109..1499Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9141 1110..1499 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9141.17216.1prot_S-dermatodea_contig9141.17216.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9141 381..1109 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9141.17216.1

>prot_S-dermatodea_contig9141.17216.1 ID=prot_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=243bp
MARELLEKGADPALEDEQGWTALHWAAQLDHSDVIDMLLSKAPATLYHIA
DGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPAAGGGGGEDVVPV
QVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSG
FAGYLALHNAVRQGQLAATSVLLAAGADERTRCDGKTASEAAESQMPFAA
NGPAIQRATIRMLARGPAFRARSWAWPARTTSGAGGGVAEVGA
back to top

mRNA from alignment at S-dermatodea_contig9141:381..1499-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9141.17216.1 ID=mRNA_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1119bp|location=Sequence derived from alignment at S-dermatodea_contig9141:381..1499- (Saccorhiza dermatodea SderLu1190fm monoicous)
TTGGCCGGCAAACTGAACCTGAGCATCAAGAATGGGGTCATGAGAGACGC GGAGGCTATGCTGGCAGCCGGGGCCAGCATCGAGGGGTGCTCCGAAATAG GTGTGCGACCCCTGGTGACCGCGGCCGTGTACGGGCATCTCGCCATAACC AAGTTCTTGATCGCGCGAGGCGCTGATGTCGATGCTGGTGCTCCCCGCAC CGTCCACGACCCTGTCGGGGGGGTTGTCTCGACAAAAGGTGACCGGGCTT TACACTTCGCAGTCAGGTGCGGCAGGGTCAAAGTCCTGCGCGAGCTACTC CGAGCGGGAGCCGACCCTAGTGCCGCTAACGAGGAAGGTATGACGCCATT GATGTCGGCATGCGGAACGGAGGACTGAGAGCGGGCTGCGATGGCAAGAG AGCTTCTTGAGAAAGGAGCTGATCCCGCCTTGGAAGACGAACAAGGCTGG ACCGCCCTTCACTGGGCCGCCCAACTCGACCACTCCGACGTGATCGACAT GCTCTTGTCGAAGGCGCCCGCAACGCTCTATCACATTGCTGATGGTGACA CAACACCACTCTTCTATGGCGCGAACCAAGGCCACAAGAACGCGGTGTCC CGTCTGCTGTCGGAGGGGGTAAAAAACCAACGCATGCGCCACGATGCCCC AGCTGCTGGTGGTGGTGGTGGCGAGGACGTGGTGCCCGTGCAGGTCGACG AAGAGATGAAATCGATCTGGACCTCGGTGGCGATTCCCTCCGCCATTGGC ACCGCTGCAGCCAACGGCTATGCTAGAATTCTCCAGATGCTTCTTGCTGT GGAAGGAGAGGAGAAGCAGGAGCACTGGGCCAAGAGCGGGTTTGCTGGTT ATTTGGCGCTCCATAATGCCGTCAGACAGGGCCAACTCGCTGCGACGAGT GTTTTACTCGCGGCCGGGGCGGACGAGCGGACCAGATGCGACGGAAAGAC TGCAAGCGAAGCTGCTGAATCACAGATGCCGTTTGCTGCAAACGGACCAG CTATCCAGCGGGCCACAATTCGAATGCTGGCGCGTGGCCCGGCGTTCCGC GCTCGTTCGTGGGCTTGGCCGGCCAGAACCACTAGTGGTGCTGGCGGCGG GGTCGCTGAAGTTGGTGCT
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig9141:381..1499-

>mRNA_S-dermatodea_contig9141.17216.1 ID=mRNA_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at S-dermatodea_contig9141:381..1499- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCAAGAGAGCTTCTTGAGAAAGGAGCTGATCCCGCCTTGGAAGACGA
ACAAGGCTGGACCGCCCTTCACTGGGCCGCCCAACTCGACCACTCCGACG
TGATCGACATGCTCTTGTCGAAGGCGCCCGCAACGCTCTATCACATTGCT
GATGGTGACACAACACCACTCTTCTATGGCGCGAACCAAGGCCACAAGAA
CGCGGTGTCCCGTCTGCTGTCGGAGGGGGTAAAAAACCAACGCATGCGCC
ACGATGCCCCAGCTGCTGGTGGTGGTGGTGGCGAGGACGTGGTGCCCGTG
CAGGTCGACGAAGAGATGAAATCGATCTGGACCTCGGTGGCGATTCCCTC
CGCCATTGGCACCGCTGCAGCCAACGGCTATGCTAGAATTCTCCAGATGC
TTCTTGCTGTGGAAGGAGAGGAGAAGCAGGAGCACTGGGCCAAGAGCGGG
TTTGCTGGTTATTTGGCGCTCCATAATGCCGTCAGACAGGGCCAACTCGC
TGCGACGAGTGTTTTACTCGCGGCCGGGGCGGACGAGCGGACCAGATGCG
ACGGAAAGACTGCAAGCGAAGCTGCTGAATCACAGATGCCGTTTGCTGCA
AACGGACCAGCTATCCAGCGGGCCACAATTCGAATGCTGGCGCGTGGCCC
GGCGTTCCGCGCTCGTTCGTGGGCTTGGCCGGCCAGAACCACTAGTGGTG
CTGGCGGCGGGGTCGCTGAAGTTGGTGCTATGGCAAGAGAGCTTCTTGAG
AAAGGAGCTGATCCCGCCTTGGAAGACGAACAAGGCTGGACCGCCCTTCA
CTGGGCCGCCCAACTCGACCACTCCGACGTGATCGACATGCTCTTGTCGA
AGGCGCCCGCAACGCTCTATCACATTGCTGATGGTGACACAACACCACTC
TTCTATGGCGCGAACCAAGGCCACAAGAACGCGGTGTCCCGTCTGCTGTC
GGAGGGGGTAAAAAACCAACGCATGCGCCACGATGCCCCAGCTGCTGGTG
GTGGTGGTGGCGAGGACGTGGTGCCCGTGCAGGTCGACGAAGAGATGAAA
TCGATCTGGACCTCGGTGGCGATTCCCTCCGCCATTGGCACCGCTGCAGC
CAACGGCTATGCTAGAATTCTCCAGATGCTTCTTGCTGTGGAAGGAGAGG
AGAAGCAGGAGCACTGGGCCAAGAGCGGGTTTGCTGGTTATTTGGCGCTC
CATAATGCCGTCAGACAGGGCCAACTCGCTGCGACGAGTGTTTTACTCGC
GGCCGGGGCGGACGAGCGGACCAGATGCGACGGAAAGACTGCAAGCGAAG
CTGCTGAATCACAGATGCCGTTTGCTGCAAACGGACCAGCTATCCAGCGG
GCCACAATTCGAATGCTGGCGCGTGGCCCGGCGTTCCGCGCTCGTTCGTG
GGCTTGGCCGGCCAGAACCACTAGTGGTGCTGGCGGCGGGGTCGCTGAAG
TTGGTGCT
back to top