mRNA_S-dermatodea_contig9141.17216.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 213 bits (543), Expect = 4.820e-60 Identity = 167/371 (45.01%), Postives = 214/371 (57.68%), Query Frame = 1
Query: 1 LAGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*----ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAP-----AAGGGGGEDVVPVQV-DEEMKSIWTSVAIPSAIGTAAA--NGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRC-DGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
LA +L I+ E LAAGAS++G SE+ RP++ AA + + + LI R ADVD G+ + G V KG RALH A+ V V R LL+AGADP +AN +G+TPLM C ED +RA MA XXXXXXXXXXXXXXX AL +AA D +++ID+LL KAP TL TPL+ A G AVS LLS G + + AA ++VV V + D MK+I + IP A+G AA+ G A I++MLL+ EG E++ HWA+ + LH+AV G ++AT VLLAAGADE DG+ A E P PA + A +RML RGPA+RARSWAWPA
Sbjct: 110 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPA 480
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 213 bits (543), Expect = 5.460e-60 Identity = 168/371 (45.28%), Postives = 213/371 (57.41%), Query Frame = 1
Query: 1 LAGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*----ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAP-----AAGGGGGEDVVPVQV-DEEMKSIWTSVAIPSAIGTAAA--NGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRC-DGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
LA +L I+ E LAAGAS++G SE+ RP++ AA G + + LI R A+VD G+ + G V KG RALH A+ V V R LL+AGADP +AN +G+TPLM C ED +RA MA XXXXXXXXXXXXXXX AL +AA D +D+ID+LL KAP TL TPL+ A G AVS LLS G + + AA ++VV V + D M++I IP A+G AA+ G A I++MLL+ EG E++ HWA+ + LH AV G ++AT VLLAAGADE DG+ A E P PA + A +RMLARGPA+RARSWAWPA
Sbjct: 118 LAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPA 488
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 174 bits (440), Expect = 7.770e-47 Identity = 138/370 (37.30%), Postives = 186/370 (50.27%), Query Frame = 1
Query: 13 LNLSIKNGVMRDAEAMLAAGASIEGCSEIGVR--PLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVR---CGRVKVLRELLRAGADPSAANEEGMTPLMSACGT--ED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGD-TTPLFYGANQGHKNAVSRLLSEGVKNQRMR---HDAP--AAGGGGGEDVVPVQVDEE-MKSIWTSVAI-PSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFA-GYLALHNAVRQGQLAATSVLLAAGADE-RTRCDGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWP 1071
L + ++NG R E LAAGASI+G G P+V AA G ++ KFL+ +GAD+++ R P G RA+H AV G + LREL++AGAD + N +G TPLM AC E ER +A ALH+AA + +I LLSK + ++A D TPL H VS LLS G + ++ + P +A G E ++ + E M ++ A+ P+++ A G ARIL++LLA EG+E+QEHWA+ G ++ A G LA VLLAAGADE T DG A E Q+P P A R L RGPA+RARSWAWP
Sbjct: 9 LLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRPGAFP-------SGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWP 371
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 154 bits (389), Expect = 2.290e-39 Identity = 149/369 (40.38%), Postives = 198/369 (53.66%), Query Frame = 1
Query: 25 IKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVD--AGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ER---AAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPAAGGG--------GGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFA-GYLALHNAVRQGQLAATSVLLAAGADERTRCDG--KTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPARTT 1083
++ G ++ A ML AGA+ +G SE PL AA G + I K LI GAD+D + + G + G LH A+ + LR LL AGADP+ A+ +G TPLM C + XXXXXXXXXXXXXXXXXX ALH AA + D++ +LLS+AP+T+ T L Y A++G + AVS LLS G ++ A G G G E VV V +D ++++ +A+ A+ + + RILQMLL VEGE+K+ WA+ G ALH A L A S+LL AGADE T +G K AS + +P P A R+L RGPAFRARSWAW A ++
Sbjct: 14 VEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLF---ANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGT-ANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESS 378
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 142 bits (358), Expect = 4.440e-35 Identity = 117/373 (31.37%), Postives = 181/373 (48.53%), Query Frame = 1
Query: 10 KLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPA---AGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERTRCD-GKTASEAAESQM-PFAANGPAIQRATIRMLARGPAFRARSWAWPARTTSGAGGGVAEV 1113
+L + ++ G + + +LA GA+++G E+ P++ AA G+ A+ K LI++GAD++ A G RA+H A+ L LL AGAD ++ + G TPLM + A +A A+H AA L + +V+ ++L+ P+ L + + TP+ A +G + AV LLS G + + A A GG +V + ++ + + AIP++IG A A+IL+ML++ EGEE + WA+ LH A + A VLL+AGA E GK ASE + P A P + A +RML RGPA+RARS+ WP T G G ++V
Sbjct: 10 RLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLETEARFPA-----------GSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALADT--GALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP---TLDGGNGTSDV 366
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 9.660e-35 Identity = 110/317 (34.70%), Postives = 154/317 (48.58%), Query Frame = 1
Query: 22 SIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPV-GGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTE--D*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGA------------NQGHKNAVSRLLSEGVKNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSG--FAGYLALHNAVRQGQLAATSVLLAAGA 921
S+ G + +A+LAAGAS++G ++ PL AA G L +T LI RGA +D GAPR VH+ + G + KG R +H A+ G+ + R L+RAGADP+ AN +G TPLMSAC + RA++ A+H+AA ++IDML +KAPATL+ TPL A R R A +VV V +D + I +SV +AI +A AR+L L++ GEE+++ + +G F+ LH AV Q TSVLLAAGA
Sbjct: 10 SVSRGDLARTQALLAAGASVDGSRKLDCCPLAVAAAQGDLDMTSLLIERGAKLDLGAPRDVHNRLTGSLTMAKGARPIHTAIGSGQYETFRLLMRAGADPNVANVDGFTPLMSACLVQRVGPHRASIVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRSRCPLNVAMEARHWNVVDVLLDN-LDPIKSSVDFGTAISSALVTKRARLLSRLVSAVGEERKQKKSLAGMTFSSSPILHIAVAQANPLTTSVLLAAGA 325
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI) HSP 1 Score: 118 bits (296), Expect = 4.900e-26 Identity = 114/403 (28.29%), Postives = 168/403 (41.69%), Query Frame = 1
Query: 4 AGKLNLSIKNGVMRDAEAMLAAGASIEGCSEIGVRPLVTAAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTK-------GDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACG------TED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPL-----FYGANQGHKNAVSRLLSEGVKNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKS-----------GFA----------------GYLALHNAVRQGQLAATSVLLAAGA-DERTRCDGKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
+G+L ++ +G ++D MLAAGAS+ E + P+ AA +GH+ I K L+ GA+++A V G T G ALH A G+V+ + LL+ GA+P++++ G+TP+M AC +A M A+H+AA + V+++LLSKAP+TL H TPL +++ AI A+ T+ G+ +L +LL VEG+EKQE WA G A G LH A + + A VLL+AGA + GK A +A NG +++ A +L +GPAFRARSWAWPA
Sbjct: 8 SGQLMNALVHGRLKDVTRMLAAGASLRASREENIHPMAVAAAHGHVHIIKALVRSGAEIEATCTSRVKSD-GYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVVELLLSKAPSTLNHATHKGFTPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAMRTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAI-GVYHHERNG-SVEAAVRALLLKGPAFRARSWAWPA 407
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 116 bits (291), Expect = 2.420e-25 Identity = 102/332 (30.72%), Postives = 155/332 (46.69%), Query Frame = 1
Query: 133 GHLAITKFLIARGADVDAGAPRTVHDPVGGVVSTKGDRALHFAVRCGRVKVLRELLRAGADPSAANEEGMTPLMSACGTED*ERAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQRMRHDAPA---AGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKSGFAGYLALHNAVRQGQLAATSVLLAAGADERT-RCDGKTASEAAESQM-PFAANGPAIQRATIRMLARGPAFRARSWAWPARTTSGAGGGVAEV 1113
G+ A+ K LI++GA+++ A G RA+H A+ L LL AGAD ++ + G TPLM + A +A A+H AA L + +V+ ++L+ P+ L + + TP+ A +G + AV LLS G + + A A GG +V + ++ + + AIP++IG A A+IL+ML++ EGE+ + WA+ LH A + VLL+AGA E GK A E + P A P + A +RML RGPA+RARS+ WP T G G ++V
Sbjct: 106 GNTAMLKLLISKGANLETEARFPA-----------GSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALADT--GALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWP---TLDGGNGTSDV 421
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI) HSP 1 Score: 110 bits (274), Expect = 2.920e-23 Identity = 112/347 (32.28%), Postives = 156/347 (44.96%), Query Frame = 1
Query: 121 AAVYGHLAITKFLIARGADVDAGAPRTVHDPVGGVVST-----KGDRALHFAVRCGRVKVLRELL-RAGADPSAANEEGMTPLMSACGTED*E---RAAMAXXXXXXXXXXXXXXXXXXXALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGVKNQR--MRHDAPAAGG--GGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAKS--GFAGYLALHNAVRQGQLAATSVLLAAGADER-TRCDGKTASEAAES-------------QMPFAANGPAIQRATIRMLARGPAFRARSWAWPA 1074
AAV+ I + LI RGA V+AG VV++ +G+ A H A+ + L +LL RAGADPSA N+ G+TPLM E A+ LH A ++ + + I +L+ +PA L IA + L+ N+GH + VS LLS G K+ R +R P A G ED+V + + +A A+ A +IL+M+L + GEE WA S G AG L LH + A+ S LLAAGA+E T G+ + + + P P + R + R PAFRARSWAWPA
Sbjct: 2 AAVHAQTEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEPPGPWLECALEVLIKAGVNPDQVDAEGWTAFLH-AVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRDHCPLAVAIIKGHEDIVKILLANLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSL-LHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPA 346
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Match: D8LMB2_ECTSI (Ankyrin repeat-containing protein 10_01 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB2_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.360e-19 Identity = 81/242 (33.47%), Postives = 118/242 (48.76%), Query Frame = 1
Query: 454 ALHWAAQLDHSDVIDMLLSKAPATLYHIADGDTTPLFYGANQGHKNAVSRLLSEGV--------KNQRMRHDAPAAGGGGGEDVVPVQVDEEMKSIWTSVAIPSAIGTAAANGYARILQMLLAVEGEEKQEHWAK---------------------SGFAGYLALHNAVRQGQLAATSVLLAAGADERTRCD--GKTASEAAESQMPFAANGPAIQRATIRMLARGPAFRARSWAWPARTTS 1086
A+H+AA + V+++LLSKAP+TL + + +PL A QG ++ +S LLS G K H+A G G + V ++ ++++ AI A+ + GY IL+MLL VEG EKQE WA + F LH A + + A +LL+AGAD T CD GK A + S +P +++ A +ML +GPAFR RS AWP T +
Sbjct: 38 AIHFAAARCETQVVELLLSKAPSTLNNADNHGYSPLGAAALQGRESTLSLLLSAGASDRIVWATKGVSALHEAIGIGKG---NSVRFLLENGLEAVGGLPAIAGAMAVSVWYGYIDILEMLLNVEGGEKQEVWANQHVYFAHDGSLLRGVPGPTMATKFEWLPILHYAAKYCSIPALRILLSAGADTET-CDLKGKLAVDHIGSLLPDDKRNGSMEAAVQQMLQKGPAFRVRSRAWPDTTAT 275 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9141.17216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9141.17216.1 >prot_S-dermatodea_contig9141.17216.1 ID=prot_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=243bp MARELLEKGADPALEDEQGWTALHWAAQLDHSDVIDMLLSKAPATLYHIAback to top mRNA from alignment at S-dermatodea_contig9141:381..1499- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9141.17216.1 ID=mRNA_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1119bp|location=Sequence derived from alignment at S-dermatodea_contig9141:381..1499- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9141:381..1499- >mRNA_S-dermatodea_contig9141.17216.1 ID=mRNA_S-dermatodea_contig9141.17216.1|Name=mRNA_S-dermatodea_contig9141.17216.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at S-dermatodea_contig9141:381..1499- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |