mRNA_S-dermatodea_contig12803.1717.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12803.1717.1
Unique NamemRNA_S-dermatodea_contig12803.1717.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 297 bits (760), Expect = 2.760e-87
Identity = 152/300 (50.67%), Postives = 206/300 (68.67%), Query Frame = 1
Query:  136 RGGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERALNRI-RELDMEGEVLEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEAISNDLVDDIADLARLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            RGG+ KAA+ L++P   PRN +TL  LR KHP E + +I++A   A  R+ R       +  VE+PF +  +   I++ NP  + GP GLRFS LQ +++ +L + IA L  +++  + LP  FW LH+SA+LSA+G+K RP+A GD+ RR +G   C QY   LAE+FEP GQYGVAV GG E++A RA LA Q+G  +L+YD  NAFNSM R  ILP+LA+++PP+  YATN+YAR+PPKLLY    G  AV+ SA GVQQGCN+G L YSAGL+ L++  +A+PPV G Q+ AFIDD
Sbjct: 1092 RGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGM-AVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDD 1390          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 3.340e-83
Identity = 147/304 (48.36%), Postives = 199/304 (65.46%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERAL----NRIRELDMEGEVLEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEA-ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GGI KAA+AL+SP P+PRN  TL  LR  HP ED   I+ A + ++    +RI    ++  V E ++PFE   I+  +KKANP SA GP GLRFS+LQ   +S+   + +AD + ++ Y  + LP  FW LH+SA+LSALGEK RP+A G VLRR +  +FC QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A   P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPGV++  ++DD
Sbjct:   53 GGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDS-VAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDD 355          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 1.270e-80
Identity = 146/304 (48.03%), Postives = 199/304 (65.46%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERAL----NRIRELDMEGEVLEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEA-ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GGI KAA+AL+SP P+PRN  TL  LR  HP ED   I+ A + ++    +RI+   ++  V E ++PFE   I+  +KKANP SA GP GLRFS+LQ   +S+   + +AD + ++ Y  + LP  FW LH+SA+LSALGEK RP+A G VLRR +  +FC QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A   P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPG ++  ++DD
Sbjct:   53 GGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDS-VAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDD 355          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 2.750e-79
Identity = 147/304 (48.36%), Postives = 200/304 (65.79%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERAL----NRIRELDMEGEVLEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEA-ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GGI KAA+AL+SP P+PRN  TL  LR  HP ED   I+ A + ++    +RI+   ++  V E ++PFE   I+  +KKANP SA GP GLRFS+LQ   +S+   + +AD + ++ Y  + LP  FW LH+SA+LSALGEK RP+A G VLRR +  +FC QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A   P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPGV++  ++DD
Sbjct:   53 GGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDS-VAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDD 355          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.890e-78
Identity = 147/304 (48.36%), Postives = 200/304 (65.79%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERAL----NRIRELDMEGEVLEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEA-ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GGI KAA+AL+SP P+PRN  TL  LR  HP ED   I+ A + ++    +RI+   ++  V E ++PFE   I+  +KKANP SA GP GLRFS+LQ   +S+   + +AD + ++ Y  + LP  FW LH+SA+LSALGEK RP+A G VLRR +  +FC QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A   P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPGV++  ++DD
Sbjct:   53 GGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDS-VAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDD 355          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.490e-54
Identity = 98/203 (48.28%), Postives = 135/203 (66.50%), Query Frame = 1
Query:  427 ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            +S+   + +AD + ++ Y  + LP  FW LH+SA+LSALGEK RP+A G VLRR +  +FC QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A   P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPG ++  ++DD
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDD 203          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 2.130e-51
Identity = 97/203 (47.78%), Postives = 135/203 (66.50%), Query Frame = 1
Query:  427 ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            +S+   + +AD + ++ Y  + LP   W LH+SA+LSALGEK RP+A G VLRR +  +F  QY   +A  FE + Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NSM R  ILP++A + P +  Y  N+YAR   KLL+ + DG+  VV S RGVQQGCN+G  G+  GL+ +MK+    PPVPGV++  ++DD
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDD 203          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 8.890e-44
Identity = 106/306 (34.64%), Postives = 160/306 (52.29%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERALNRIRELDMEGEV--LEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEAISNDLVDDIADLA------RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GG+  AA AL++ +P+P N +T   L+AK P ED  ++ +A   A+   R  + EG       E  F+  ++   I + + NS AG  G RFSHL+  ++N +  +    A      RL+   N+ PP FW L   +SL ALGEK RPV  G   RR + A    ++  +L E F  + Q+GVAV GGVE +A+ A L  Q G+ ++  D +NAFN+  R  I+   A+ VP +  Y    Y   P K +Y +  G    ++   GVQQG  +G   +   L+P++ K +A     GV + A++DD
Sbjct:   24 GGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDD 329          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 2.580e-41
Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = 1
Query:  427 ISNDLVDDIADLA-RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQ 921
            +S+D  + +AD + ++ Y  + LP LFW   +SASLSALGEK RP+A G VLRR +  +FC QY + +A+ FE S Q+G  V GGVEI+A  A L+ Q+G TILS+DG NA+NS+ R  IL ++A   P +  Y  N+YAR   KLL+ + DG+  +V S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.680e-41
Identity = 106/306 (34.64%), Postives = 159/306 (51.96%), Query Frame = 1
Query:  139 GGICKAAAALVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERALNRIRELDMEGEV--LEVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEAISNDLVDDIADLA------RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQYNEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNSMFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGVQQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD 1032
            GG+  AA AL++ +P+P N +T   L+AK P ED  ++ +A   A+   R  + EG       E  F+  ++   I   + NS AG  G RFSHL+  ++  +  +    A      RL+   N+ PP FW L   +SL ALGEK RPV  G   RR + A    ++  +L E F  + Q+GVAV GGVE +A+ A L  Q G+ ++  D +NAFN+  R  I+   A+ VP +  Y    Y   P K +YA+  G    ++   GVQQG  +G   +   L+P++ K +A     GV + A++DD
Sbjct:  302 GGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDD 607          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12803.1717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.760e-8750.67Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE3.340e-8348.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE1.270e-8048.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE2.750e-7948.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE1.890e-7848.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.490e-5448.28Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE2.130e-5147.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE8.890e-4434.64Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3H3_9PHAE2.580e-4148.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMQ2_9PHAE3.680e-4134.64Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12803contigS-dermatodea_contig12803:2073..3713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.1
Seed ortholog evalue6.8e-14
Seed eggNOG ortholog400682.PAC_15708731
Preferred nameCWC27
KEGG koko:K01802,ko:K12737
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005911,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070013,GO:0071012,GO:0071013,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1990904
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0885@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko03110
Hectar predicted targeting categoryother localisation
Exons2
Model size1032
Cds size1017
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12803.1717.1prot_S-dermatodea_contig12803.1717.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12803 2073..3698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924263.10253-CDS-S-dermatodea_contig12803:2072..29671622924263.10253-CDS-S-dermatodea_contig12803:2072..2967Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12803 2073..2967 -
1694079134.426809-CDS-S-dermatodea_contig12803:2072..29671694079134.426809-CDS-S-dermatodea_contig12803:2072..2967Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12803 2073..2967 -
1622924263.1142623-CDS-S-dermatodea_contig12803:3576..36981622924263.1142623-CDS-S-dermatodea_contig12803:3576..3698Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12803 3577..3698 -
1694079134.4402041-CDS-S-dermatodea_contig12803:3576..36981694079134.4402041-CDS-S-dermatodea_contig12803:3576..3698Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12803 3577..3698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924263.125008-UTR-S-dermatodea_contig12803:3698..37131622924263.125008-UTR-S-dermatodea_contig12803:3698..3713Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12803 3699..3713 -
1694079134.4510138-UTR-S-dermatodea_contig12803:3698..37131694079134.4510138-UTR-S-dermatodea_contig12803:3698..3713Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12803 3699..3713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12803.1717.1

>prot_S-dermatodea_contig12803.1717.1 ID=prot_S-dermatodea_contig12803.1717.1|Name=mRNA_S-dermatodea_contig12803.1717.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=339bp
MPWPRRRHHHPPTQRSPRPRPHAPRGPRTRADTTARRNGTRGGICKAAAA
LVSPEPAPRNQQTLNLLRAKHPPEDRAKISKASERALNRIRELDMEGEVL
EVEQPFESSMIRLAIKKANPNSAAGPVGLRFSHLQEAISNDLVDDIADLA
RLVYSENSLPPLFWALHSSASLSALGEKARPVACGDVLRRTMGATFCSQY
NEQLAEYFEPSGQYGVAVRGGVEIMALRAMLAFQEGYTILSYDGANAFNS
MFRRRILPSLAEIVPPVTTYATNVYARDPPKLLYAVADGTTAVVDSARGV
QQGCNIGSLGYSAGLMPLMKKCKASPPVPGVQMCAFIDD
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mRNA from alignment at S-dermatodea_contig12803:2073..3713-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12803.1717.1 ID=mRNA_S-dermatodea_contig12803.1717.1|Name=mRNA_S-dermatodea_contig12803.1717.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1641bp|location=Sequence derived from alignment at S-dermatodea_contig12803:2073..3713- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCTCGCGAGCAAGCATGCCATGGCCGCGCCGCCGTCATCACCATCCACC AACGCAGAGATCACCCCGGCCAAGGCCACATGCTCCTCGAGGCCCTCGGA CACGAGCTGATACCACGGCCCGACGGAATGGCACACGGTGCGTGCGCCAA GTGCCACAACATCTACGCGAAAGCGGCCCAACATGAGCTCGGCTGCGAAA GAACGGCGCAGGCTCCACGGTCAGGCCCCAGCTCAGCGCGACTCGCCCCA GGACAGGCACGCGGCCAACAGCACACCCGAGCCGGATCCTCCTCCTCGCC CACTCAACCAGCCCCTCAAGTGGACCGTCACATATGTCGGTGAAGCCCTC GACAGCCTGGATGGGGAGAGCCTCAAGCTCATGGTGCTCTCCGCGGCATT ATACCTCAACCCGAAGCTCGCCAGCAGCTTCGGGCTCCGCGTTCAACACG CCATCCGACTGCTGATTAGAGCGCACGGTGCGTGCGCAGTCGCGCCGGAC CCTCCTACGCCGGAGCTCGCCACCAATCTGGAGCGAGCCGTCAAACTCCT GCACATCACGCCCGCGCTCCTTCAATCGTCAGACGGACGATGCAGCAGAC GGGAGTGTTACGATTCCTACGGCAATGGAAACCTCGCCAAGCTGATTGAG TTCCTGACACTGTACGCCTCGAAGCACCGTGGGGGGGGGGGGAGAACACA CGGACGAAGCGCGGTACAAGAGGGCAAGCATGCTCGCACACAGAAGAGGA GGCATCTGCAAGGCAGCCGCGGCCCTCGTCTCGCCGGAGCCAGCGCCGCG TAACCAGCAAACCCTCAACCTCCTACGAGCCAAGCACCCCCCTGAGGACA GAGCCAAAATTTCGAAAGCGAGCGAGCGCGCGCTCAACCGCATCCGAGAG CTGGACATGGAGGGAGAGGTCCTGGAGGTAGAGCAACCGTTCGAGAGCAG CATGATCAGGCTGGCCATCAAGAAGGCCAACCCGAACTCCGCCGCGGGGC CAGTAGGCCTGAGATTCAGCCACCTCCAGGAAGCGATCAGCAACGACCTT GTGGACGACATCGCCGACTTAGCGCGCCTCGTGTACTCTGAAAACTCGCT CCCGCCGCTCTTCTGGGCACTCCACTCCAGCGCGTCGCTGTCCGCCCTCG GGGAGAAGGCGAGACCGGTCGCTTGCGGTGACGTCCTTAGGCGAACGATG GGAGCCACATTCTGCAGCCAATATAACGAACAGCTCGCCGAATACTTCGA GCCGAGCGGGCAGTATGGAGTGGCGGTGAGAGGCGGTGTCGAGATCATGG CACTCCGAGCGATGCTCGCTTTCCAGGAGGGCTACACGATCCTATCGTAC GACGGCGCCAACGCCTTCAACAGCATGTTCCGCCGCAGAATCCTGCCGTC CCTAGCTGAGATCGTCCCACCAGTCACGACGTACGCCACCAACGTCTACG CCCGCGATCCGCCTAAGCTGCTCTACGCCGTGGCGGACGGCACAACAGCA GTAGTCGACTCGGCGCGAGGCGTTCAGCAAGGGTGCAACATCGGATCGCT AGGATACAGCGCGGGGCTCATGCCGCTGATGAAGAAATGCAAAGCCTCGC CGCCCGTCCCCGGCGTGCAGATGTGCGCCTTCATCGACGAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig12803:2073..3713-

>mRNA_S-dermatodea_contig12803.1717.1 ID=mRNA_S-dermatodea_contig12803.1717.1|Name=mRNA_S-dermatodea_contig12803.1717.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at S-dermatodea_contig12803:2073..3713- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCATGGCCGCGCCGCCGTCATCACCATCCACCAACGCAGAGATCACC
CCGGCCAAGGCCACATGCTCCTCGAGGCCCTCGGACACGAGCTGATACCA
CGGCCCGACGGAATGGCACACGATGCCATGGCCGCGCCGCCGTCATCACC
ATCCACCAACGCAGAGATCACCCCGGCCAAGGCCACATGCTCCTCGAGGC
CCTCGGACACGAGCTGATACCACGGCCCGACGGAATGGCACACGAGGAGG
CATCTGCAAGGCAGCCGCGGCCCTCGTCTCGCCGGAGCCAGCGCCGCGTA
ACCAGCAAACCCTCAACCTCCTACGAGCCAAGCACCCCCCTGAGGACAGA
GCCAAAATTTCGAAAGCGAGCGAGCGCGCGCTCAACCGCATCCGAGAGCT
GGACATGGAGGGAGAGGTCCTGGAGGTAGAGCAACCGTTCGAGAGCAGCA
TGATCAGGCTGGCCATCAAGAAGGCCAACCCGAACTCCGCCGCGGGGCCA
GTAGGCCTGAGATTCAGCCACCTCCAGGAAGCGATCAGCAACGACCTTGT
GGACGACATCGCCGACTTAGCGCGCCTCGTGTACTCTGAAAACTCGCTCC
CGCCGCTCTTCTGGGCACTCCACTCCAGCGCGTCGCTGTCCGCCCTCGGG
GAGAAGGCGAGACCGGTCGCTTGCGGTGACGTCCTTAGGCGAACGATGGG
AGCCACATTCTGCAGCCAATATAACGAACAGCTCGCCGAATACTTCGAGC
CGAGCGGGCAGTATGGAGTGGCGGTGAGAGGCGGTGTCGAGATCATGGCA
CTCCGAGCGATGCTCGCTTTCCAGGAGGGCTACACGATCCTATCGTACGA
CGGCGCCAACGCCTTCAACAGCATGTTCCGCCGCAGAATCCTGCCGTCCC
TAGCTGAGATCGTCCCACCAGTCACGACGTACGCCACCAACGTCTACGCC
CGCGATCCGCCTAAGCTGCTCTACGCCGTGGCGGACGGCACAACAGCAGT
AGTCGACTCGGCGCGAGGCGTTCAGCAAGGGTGCAACATCGGATCGCTAG
GATACAGCGCGGGGCTCATGCCGCTGATGAAGAAATGCAAAGCCTCGCCG
CCCGTCCCCGGCGTGCAGATGTGCGCCTTCATCGACGACAGGAGGCATCT
GCAAGGCAGCCGCGGCCCTCGTCTCGCCGGAGCCAGCGCCGCGTAACCAG
CAAACCCTCAACCTCCTACGAGCCAAGCACCCCCCTGAGGACAGAGCCAA
AATTTCGAAAGCGAGCGAGCGCGCGCTCAACCGCATCCGAGAGCTGGACA
TGGAGGGAGAGGTCCTGGAGGTAGAGCAACCGTTCGAGAGCAGCATGATC
AGGCTGGCCATCAAGAAGGCCAACCCGAACTCCGCCGCGGGGCCAGTAGG
CCTGAGATTCAGCCACCTCCAGGAAGCGATCAGCAACGACCTTGTGGACG
ACATCGCCGACTTAGCGCGCCTCGTGTACTCTGAAAACTCGCTCCCGCCG
CTCTTCTGGGCACTCCACTCCAGCGCGTCGCTGTCCGCCCTCGGGGAGAA
GGCGAGACCGGTCGCTTGCGGTGACGTCCTTAGGCGAACGATGGGAGCCA
CATTCTGCAGCCAATATAACGAACAGCTCGCCGAATACTTCGAGCCGAGC
GGGCAGTATGGAGTGGCGGTGAGAGGCGGTGTCGAGATCATGGCACTCCG
AGCGATGCTCGCTTTCCAGGAGGGCTACACGATCCTATCGTACGACGGCG
CCAACGCCTTCAACAGCATGTTCCGCCGCAGAATCCTGCCGTCCCTAGCT
GAGATCGTCCCACCAGTCACGACGTACGCCACCAACGTCTACGCCCGCGA
TCCGCCTAAGCTGCTCTACGCCGTGGCGGACGGCACAACAGCAGTAGTCG
ACTCGGCGCGAGGCGTTCAGCAAGGGTGCAACATCGGATCGCTAGGATAC
AGCGCGGGGCTCATGCCGCTGATGAAGAAATGCAAAGCCTCGCCGCCCGT
CCCCGGCGTGCAGATGTGCGCCTTCATCGACGAC
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