prot_S-dermatodea_contig9060.17147.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9060.17147.1
Unique Nameprot_S-dermatodea_contig9060.17147.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length236
Homology
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: D8LF51_ECTSI (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF51_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 1.440e-106
Identity = 164/195 (84.10%), Postives = 174/195 (89.23%), Query Frame = 0
Query:   41 RGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 235
            RG R  VKSGTYDFEANKALLKLYQFFPDL +PE VAL+LAKALMNVPSTDFMALMYIV P LHR EPV SLKRAAD+LETAKFVDFWQ CA+GDMPALIE VPGF KH+RVFIVHTLA+TFQ   RQ MEQCLDLD  EL +FV AN+DVVSA+PDG +FKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF
Sbjct:    2 RGSRG-VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 195          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A835Z1S6_9STRA (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.410e-66
Identity = 122/231 (52.81%), Postives = 151/231 (65.37%), Query Frame = 0
Query:    3 LEQMDFPASYEAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTIDKLS 233
            ++ M  PA + A+RPVVEHEYFDHR VPQLE YL EQA        SGTYDFEANKALLKLYQFFPDL K + VAL   KALM +P+ DF AL Y+        EP++SL RA DALE A++  FW +  E +  ALI+++PGF+   R   +  LA+TFQ+V    +E+ + L   ELEAFV      V    DG    FA NEFNQ+QPK+FKESVEF+K+LK +  LS
Sbjct:    2 VQPMQLPARHAAMRPVVEHEYFDHRVVPQLEAYLAEQA-------SSGTYDFEANKALLKLYQFFPDLVKADMVALAAGKALMALPAPDFAALSYLAPAAALAAEPLTSLARALDALEGARYGAFWAVTREPEAAALIQRLPGFADQARRVALSALAATFQSVPLSALEEAVALSGAELEAFVGGLGGEVKLG-DG-RAAFARNEFNQMQPKRFKESVEFEKVLKAVGTLS 223          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A7S2FZN4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZN4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.160e-48
Identity = 99/230 (43.04%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    6 MDFPASYEAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAAN-SDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 234
            M  PASYE I  +++ + F+  ++ +L+ YL+EQ       + + TYDF ANKALLKLY F+PD +  + +AL L KALM +PSTD M L+Y+V      +EPV++L R A  LETAKFV+FW++   G    L++ V GF + +R +++  L+ TFQ V+ +     L LD  +LE +V+AN SD +S   +G    F  N  NQ +PKKFKE++ FD++L  ID L+S
Sbjct:    1 MALPASYEEIATLLDEQAFEKSSIEKLQAYLDEQ-------IATETYDFVANKALLKLYSFYPDQASDQYIALALTKALMALPSTDMMLLLYLVPESAQTKEPVATLVRCAVHLETAKFVEFWEVANLGGNE-LLDAVSGFDEAIRSYMIGVLSITFQKVESETFADLLALDEGDLEEYVSANQSDKLSI--EGKNVVFTPNSENQQRPKKFKENISFDQMLPLIDFLAS 220          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A7S2H0N4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.030e-41
Identity = 89/232 (38.36%), Postives = 136/232 (58.62%), Query Frame = 0
Query:    5 QMDFPASYEAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFAL---NEFNQIQPKKFKESVEFDKILKTIDKLS 233
            +M+ P S ++I   +  +      +  L+EYL EQ + D       TYDF ANK L+KLYQF+P+ S    +AL + K++M +PSTD   L+Y+V   L  +EP+ +L R AD LETA+FV+FW++   G    L++ +PGF + +R F++  L+ TFQ ++ +     L LD + LE F+A  +D +       E KF +   N  NQ +PKKFKE++ FD +L  I+ LS
Sbjct:    5 EMEIPQSAQSIAEKLALDEHSVELIDTLQEYLNEQVQTD-------TYDFMANKTLMKLYQFYPERSNENCIALAVTKSMMALPSTDLSVLLYLVPETLALKEPIHTLVRCADHLETARFVEFWEVANLGGNE-LLDAIPGFPEAIRSFMIGVLSMTFQKLQSETFLDLLMLDEESLEEFIAEQTDKLCLE----EKKFVIFLPNSENQSRPKKFKENISFDHMLPIINLLS 224          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A7S2WSD7_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.750e-38
Identity = 84/222 (37.84%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   13 EAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 234
            E++   +    +D  A+  LE Y+ EQ       V+  TYDF ANKALLKLYQFFP  +    VALIL KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW++   G    L++ + GF + +R +++  L  TFQ+++ +     + L  + L  +V   SDV+    +G +  F  N  NQ QPK FKE++ FD +   +  L+S
Sbjct:   12 ESVATALRRNEYDQDAIELLESYVAEQ-------VEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLESEVFMDLVALPDEHLAEYVGTKSDVMRL--EGKQVIFVENPQNQPQPKTFKENISFDHLAPVMSLLTS 223          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: W7U338_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U338_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.640e-35
Identity = 84/227 (37.00%), Postives = 133/227 (58.59%), Query Frame = 0
Query:    9 PASYEAIRP-VVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSS 234
            P+SY ++   V+    +    V  LEEYL+ Q       VK G+YDFEANK+LLKLY  +P L+  E+V  IL KAL+N+P+TDF  L+YI+   L   E V ++K AA+ALETA++ DFW I       A+   +P +   +R  I+   A+T++AV + ++   + L   EL++F+ AN+  + A  +     FA N+ NQ   +K+KE V+   +L  +++L++
Sbjct:   44 PSSYNSVHSNVLGDGLYTQEKVKHLEEYLQLQ-------VKEGSYDFEANKSLLKLYLLYPPLANNENVETILLKALLNLPATDFTLLLYILPEKLQTDENVLTIKDAAEALETARYADFWSIL--NSRAAVFLAIPEWKDDIRKIILTVHAATYKAVDKAHVSDGVGLSGDELDSFLTANTPGLVAKVEVDRVIFAPNKENQPWVRKYKEKVDLQNMLGILNRLAA 261          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A7S2SPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPG3_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.000e-28
Identity = 63/154 (40.91%), Postives = 93/154 (60.39%), Query Frame = 0
Query:   13 EAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVK 166
            E++   +    +D  A+  LE Y+ EQ       V+  TYDF ANKALLKLYQFFP  +    VALIL KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW++   G    L++ + GF + +R +++  L  TFQ+++
Sbjct:   12 ESVATALRRNEYDQDAIELLESYVAEQ-------VEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLE 157          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A1X6NQY4_PORUM (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQY4_PORUM)

HSP 1 Score: 109 bits (272), Expect = 1.220e-25
Identity = 66/180 (36.67%), Postives = 104/180 (57.78%), Query Frame = 0
Query:   15 IRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSA 194
            +  +++ + +D   +P LEEY+E+Q       V +GT D  AN A LKLYQF+P   K   V+ IL KA+M +PSTDF+  MY++       EP+ +L + A  LET +F DFW   A G +  L++ VPGF + VR F++  +  T++ V+R  + + L L+  +  A  AA  +V+ +
Sbjct:   14 VMTLLQSQRYDPDILPTLEEYVEQQ-------VATGTNDAMANLATLKLYQFYPATYKTAVVSKILIKAIMALPSTDFLCAMYLIPAATADDEPIPALVQLASMLETGRFEDFWP--ATGAVRQLLDGVPGFDEAVRSFMLVVIGRTYKRVERTVLARLLGLEGVDEAAEEAAVDEVIKS 184          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A3S1B284_ELYCH (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1B284_ELYCH)

HSP 1 Score: 104 bits (260), Expect = 5.650e-24
Identity = 69/204 (33.82%), Postives = 108/204 (52.94%), Query Frame = 0
Query:   22 EYFDHRAVPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKI 225
            E ++   +  L+ Y++ QA          TYD EAN A+LKLYQF P+L + E  A+IL KAL N+P +DF+    ++ P     EPV+ +   A+ LETA F +FW I    D+  L+E + GF   +R F+ H +AST+  +++  + Q L  +V E +A    +    +   DG  + F  N+   I+ K   E + FD +
Sbjct:   17 ERYNPENLVNLQRYVDMQAN-------ENTYDLEANLAVLKLYQFNPNLYQAEVTAVILLKALTNLPHSDFILCKCMIEPGRLLEEPVAKVLVLAELLETANFNEFW-ITLMKDLDPLVEGIVGFEDSIRKFVCHVVASTYSTIRKDKLRQLLG-NVTEAQASQWVSKYGWTEQLDG--YVFIANQDETIRTKNITEKISFDSV 209          
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Match: A0A0D2WV50_CAPO3 (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WV50_CAPO3)

HSP 1 Score: 104 bits (260), Expect = 1.110e-23
Identity = 63/201 (31.34%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   29 VPQLEEYLEEQARGDRCFVKSGTYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVAPLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHVRVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLEFKFALNEFNQIQPKKFKESVEFDKILKTI 229
            + +LE+Y++EQ       V  GTYDFE+N ALL+LYQF P     ++ A +L K L+ +P+ D+ + +++++  L   E + ++  AA  LE A+F+ FW +      P + + +P F+   R FI H L+ + Q++ +  + + LDL     ++FVAA    V    D +   F +N+ NQ + K   E + F+ + K +
Sbjct:   55 IERLEKYIQEQ-------VTDGTYDFESNLALLRLYQFHPTKVNADASAQVLLKMLLVLPAGDYASSLFLLSDKLQADESIKNIVAAAHHLEAAQFIQFWSLV--NATPKIKQLMPSFADEARKFIAHILSVSAQSMDQLLLSKFLDLQAGAFDSFVAAQGWAVER--DAV--SFGVNKDNQAKSKNISEKIPFNNLTKLL 242          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9060.17147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF51_ECTSI1.440e-10684.10Eukaryotic translation initiation factor 3 k subun... [more]
A0A835Z1S6_9STRA2.410e-6652.81Eukaryotic translation initiation factor 3 k subun... [more]
A0A7S2FZN4_9STRA4.160e-4843.04Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2H0N4_9STRA2.030e-4138.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2WSD7_9STRA2.750e-3837.84Eukaryotic translation initiation factor 3 subunit... [more]
W7U338_9STRA6.640e-3537.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SPG3_9STRA3.000e-2840.91Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1X6NQY4_PORUM1.220e-2536.67Eukaryotic translation initiation factor 3 subunit... [more]
A0A3S1B284_ELYCH5.650e-2433.82Eukaryotic translation initiation factor 3 subunit... [more]
A0A0D2WV50_CAPO31.110e-2331.34Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 72..188
e-value: 1.4E-16
score: 60.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 135..234
e-value: 2.3E-11
score: 45.7
IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticGENE3D1.25.40.250coord: 11..130
e-value: 1.5E-28
score: 100.8
NoneNo IPR availablePANTHERPTHR13022:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Kcoord: 22..230
IPR009374Eukaryotic translation initiation factor 3 subunit KPANTHERPTHR13022EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11coord: 22..230
IPR009374Eukaryotic translation initiation factor 3 subunit KHAMAPMF_03010eIF3kcoord: 6..233
score: 18.692
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 52..227
score: 13.615
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 144..228
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 22..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9060contigS-dermatodea_contig9060:2093..5396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9060.17147.1mRNA_S-dermatodea_contig9060.17147.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9060 368..5408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9060.17147.1 ID=prot_S-dermatodea_contig9060.17147.1|Name=mRNA_S-dermatodea_contig9060.17147.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=236bp
MPLEQMDFPASYEAIRPVVEHEYFDHRAVPQLEEYLEEQARGDRCFVKSG
TYDFEANKALLKLYQFFPDLSKPESVALILAKALMNVPSTDFMALMYIVA
PLLHRREPVSSLKRAADALETAKFVDFWQICAEGDMPALIEKVPGFSKHV
RVFIVHTLASTFQAVKRQYMEQCLDLDVQELEAFVAANSDVVSAAPDGLE
FKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033464CSN8_PSD8_EIF3K
IPR036388WH-like_DNA-bd_sf
IPR016020Transl_init_fac_sub12_N_euk
IPR009374eIF3k
IPR000717PCI_dom
IPR036390WH_DNA-bd_sf
IPR016024ARM-type_fold