mRNA_S-dermatodea_contig9030.17112.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9030.17112.1
Unique NamemRNA_S-dermatodea_contig9030.17112.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 6.820e-173
Identity = 376/916 (41.05%), Postives = 480/916 (52.40%), Query Frame = 1 
Query:   13 AASSTPLAWQSIEAVGKWQLGEPAVLRRTIAENEAEEHNVIRGCPVDTCPMYGVSDVGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEVPPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHDLAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCRNCSRIAVGG-WGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFDLPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGRCERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIREMKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGAYWEKVSGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQT---------AAQANMGTADVHAAAAAFSSTSAVRRGAQANVVVDVGMGAGVSSRAGVSSDRLDGAENLQIARKGVALADERCAPAEGL---GGAGIVGGVPGCANQAGXXXXXXXRATEQVHEAR-PAKRLKGLSPWPERNATEWALPMREQAKVQPPPQQDNATGK------MPPAAGK--------------------GNAPASGTPQGASAKVSPP------VQRKGKAAAAA-----AAAGSIPREGLKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNVLEGGSYLSVAAXXXXXXXXPPLATTTLDFSNTIGRQLLGRRICFADFDALPDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASLDVLLRRDWMDVELKT 2607
            A S  PL+W +IE  GK +LG PA  RRT    E E  +  +GCP+  CPM     +   WM+RHL+SHT+ + EK Q E YI +SV ++LH+MCLD EVP AQRK ER++ SRALL TPRAGIG  A ++ET VTG+N  P VRRCAHDLA G C+G+     IVRCDKC AW+H+SCGQ+  G GIS+  + +ETLCR C+RIA+G   GKDP   ++KQ SL+REKR  ML FLE +VE+  P GVFDLP++  +V         DG           +GG     K+D RP CAA  C RE+R DS+FCCD CGVL+AE+ L +A+RH +E   GI+RGRRLRE RE+K  K +VGLAMK+++ PR P    + E+ L ALV R+ RLW+RLIEIGAYWEKVSG                      XXXX                      GR  GG    +A A+  GG Q   + G                          A +  +G                  +GA    V   G GA   +R          A++L+    G A        A G+   GG   +   P  A   G       +A      A  P   ++  S  PE             A++        + GK       PP  G+                    G  P   T  G   K +PP       +R    +  A     AA    P  G+++ MC+YCG+ETG  V+EHLE CYR+  A+RNERL  ATLRPL +  + L+GGS L  A+        P  A   LD    IGRQLL RRI +A+FD+LPDP++FQLH+DLKGW  S SRLDFLYKELVRQRNAAI+ELQAL+R+EA L+V LR DWM  +L++
Sbjct:  389 APSRPPLSWITIERAGKRRLGVPAEERRTKLGGENETVSPFQGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSRALLDTPRAGIGHLAGMIETVVTGDNKSPHVRRCAHDLAVGGCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRTCARIAIGAPQGKDPTATLQKQLSLVREKRTKMLEFLEEDVETGAPCGVFDLPLNIRDVSTAGGVGPKDGNANGPDAGGNSNGGNGGVDKRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHALVVRKCRLWQRLIEIGAYWEKVSGSRVGVLAATRTAAQTSSRKATAXXXXSVTASGAVDPALSRSAPERLAGGRDRGGV---IASASSSGGVQVELDVGXXXXXXXXXXXXXXXXXXXXEAEVSGAGKEVVGXXXXXXXXXXXXXXGTEGQGASNGCVGWEGGGAKKRAREDGDGPPQQAAKSLKQTSNGEA--------ASGIDVGGGGAAITEPPSAAVAMGAQSKGKGKAALDPQAAESPTAAMEVSSADPEAEIDTGLEVPDTMAEIAGQAWTYGSFGKERVLWYCPPGGGEADRCTSSEQLQAYLRERYGNGRVPGQFTFSG---KDAPPQWERVDARRPDNGSLIAKDKDKAAVPPPPSGGVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPLRDN-HFLQGGSRLGAASVTEPVSVPPSAA---LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRS 1286
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BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 1.110e-165
Identity = 382/931 (41.03%), Postives = 489/931 (52.52%), Query Frame = 1 
Query:   13 AASSTPLAWQSIEAVGKWQLGEPAVLRRTIAENEAEEHNVIRGCPVDTCPMYGVSDVGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEVPPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHDLAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCRNCSRIAVGG-WGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFDLPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGRCERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIREMKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGAYWEKVSGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQTAAQANMGTADVHAAAAAFSSTSAVR--------------------RGAQANVVVDVGMGAGVSSRAGVSSDRLDGAENLQIARKGVALADERCAPAEGL---GGAGIVGGVPGCAN---------------QAGXXXXXXXRATEQVHEARPAKRLKGLSPWPERNATEWALPMREQAKVQ---PPP--QQDNATGKMPPAA------GKGNAPASGTPQGASAKVSPP----------------VQRKGKAAAAAAAAGSIPREGLKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNVLEGGSYLSVAAXXXXXXXXPPLATTTLDFSNTIGRQLLGRRICFADFDALPDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASLDVLLRRDWMDVELKT 2607
            A S  PL+W +IE  GK +LG PA  RR +   E E  +  RGCP+  CPM     +   WM+RHL+SHT+ + E+ Q E YI +SV ++LH+MCLD EVP AQRK ER++ +RALL TPRAGIG  A ++ET VTG+N DP VR   H+   G C+G+     IVRCDKC AW+H+SCGQ+  G GIS+  + +ETLCR C+RI +G   GKDP   ++KQ SL+REKR  ML FLE +VE+  P GVFDLP++  +V         DG           +GG      +D RP CAA  C RE+R DS+FCCD CGVL+AE+ L +A+RH +E   GI+RGRRLRE RE+K  K +VGLAMK+++ PR P    + E+ L  LV RR RLW+RLIEIGAYWEKVSG                    XXXXXXXXXX                   R  GG+   +A  +G GG Q   + G      G ++       AA A   TA+                                   +GA    V   G GA   +R G        A +L+    G A        A G+   GG+  +   P  A                QA          +    EA   K L+G     E     W     ++ +V    PP   + D  T +    A      G G  P   T  G   K +PP                 + K KAA   +     P  G+++  C+YCG+ETG  V+EHLE CYR+  A+RNERL  ATLRPLP+  + L+GGS L  AA        PP A   LD    IGRQLL RRI +A+FD+LPDP++FQLH+DLKGW  S SRLDFLYKELVRQRNAAI+ELQAL+R+EA L+V LR DWM  +L++
Sbjct:  369 APSRPPLSWITIERAGKRRLGVPAEERRMMLGGENETVSPFRGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMARALLDTPRAGIGHLAGVMETMVTGDNKDPHVR---HEPQEGXCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRACARITIGAPQGKDPTATLQKQLSLVREKRTKMLEFLERDVETGTPCGVFDLPLNIRDVNTAGGVELKDGNAKGPAAGGNSNGGNGGVDMRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHGLVARRCRLWQRLIEIGAYWEKVSGSRVGVLAATKTAAQTSSRKAXXXXXXXXXXSGAFDPALSRSAPQRQTGVRDRGGS---IASVSGSGGIQVELDVG------GCSI-------AAAAKNDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGASNICVGWEGGGAKKRAREGGDGPSQQAANSLKQTSNGEA--------ASGIDVGGGSAAIPETPSAAAMGAHSKGKGKAALDPQAAESTTAATDVSSADPEAEIDKGLEGPDTTAEIAGKAWTYGSFDKERVLWYCPPGGREADRCTNREQLQAYLRERYGNGRVPGQFTFSG---KDAPPHWERVDAHCPDNGSLIAKHKDKAAVPPS-----PSGGVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDN-HFLQGGSRLG-AASVTEPVSLPPSAC--LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRS 1260
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI6.820e-17341.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE1.110e-16541.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9030contigS-dermatodea_contig9030:115..5400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-26_005550.1
Exons9
Model size2816
Cds size2502
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925381.03996-UTR-S-dermatodea_contig9030:114..2661622925381.03996-UTR-S-dermatodea_contig9030:114..266Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9030 115..266 -
1694079894.9081073-UTR-S-dermatodea_contig9030:114..2661694079894.9081073-UTR-S-dermatodea_contig9030:114..266Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9030 115..266 -
1622925381.1592822-UTR-S-dermatodea_contig9030:5238..54001622925381.1592822-UTR-S-dermatodea_contig9030:5238..5400Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9030 5239..5400 -
1694079895.0284896-UTR-S-dermatodea_contig9030:5238..54001694079895.0284896-UTR-S-dermatodea_contig9030:5238..5400Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9030 5239..5400 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925381.049729-CDS-S-dermatodea_contig9030:266..4101622925381.049729-CDS-S-dermatodea_contig9030:266..410Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 267..410 -
1694079894.9201014-CDS-S-dermatodea_contig9030:266..4101694079894.9201014-CDS-S-dermatodea_contig9030:266..410Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 267..410 -
1622925381.058995-CDS-S-dermatodea_contig9030:765..10921622925381.058995-CDS-S-dermatodea_contig9030:765..1092Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 766..1092 -
1694079894.9355881-CDS-S-dermatodea_contig9030:765..10921694079894.9355881-CDS-S-dermatodea_contig9030:765..1092Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 766..1092 -
1622925381.0712588-CDS-S-dermatodea_contig9030:1392..23531622925381.0712588-CDS-S-dermatodea_contig9030:1392..2353Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 1393..2353 -
1694079894.9495406-CDS-S-dermatodea_contig9030:1392..23531694079894.9495406-CDS-S-dermatodea_contig9030:1392..2353Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 1393..2353 -
1622925381.0841796-CDS-S-dermatodea_contig9030:2491..26401622925381.0841796-CDS-S-dermatodea_contig9030:2491..2640Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 2492..2640 -
1694079894.9614475-CDS-S-dermatodea_contig9030:2491..26401694079894.9614475-CDS-S-dermatodea_contig9030:2491..2640Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 2492..2640 -
1622925381.1005225-CDS-S-dermatodea_contig9030:2855..31571622925381.1005225-CDS-S-dermatodea_contig9030:2855..3157Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 2856..3157 -
1694079894.97444-CDS-S-dermatodea_contig9030:2855..31571694079894.97444-CDS-S-dermatodea_contig9030:2855..3157Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 2856..3157 -
1622925381.1143923-CDS-S-dermatodea_contig9030:3608..39431622925381.1143923-CDS-S-dermatodea_contig9030:3608..3943Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 3609..3943 -
1694079894.9861152-CDS-S-dermatodea_contig9030:3608..39431694079894.9861152-CDS-S-dermatodea_contig9030:3608..3943Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 3609..3943 -
1622925381.1260643-CDS-S-dermatodea_contig9030:4363..44561622925381.1260643-CDS-S-dermatodea_contig9030:4363..4456Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 4364..4456 -
1694079894.9971268-CDS-S-dermatodea_contig9030:4363..44561694079894.9971268-CDS-S-dermatodea_contig9030:4363..4456Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 4364..4456 -
1622925381.1360376-CDS-S-dermatodea_contig9030:4761..49021622925381.1360376-CDS-S-dermatodea_contig9030:4761..4902Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 4762..4902 -
1694079895.0077648-CDS-S-dermatodea_contig9030:4761..49021694079895.0077648-CDS-S-dermatodea_contig9030:4761..4902Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 4762..4902 -
1622925381.1470947-CDS-S-dermatodea_contig9030:5188..52381622925381.1470947-CDS-S-dermatodea_contig9030:5188..5238Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 5189..5238 -
1694079895.018234-CDS-S-dermatodea_contig9030:5188..52381694079895.018234-CDS-S-dermatodea_contig9030:5188..5238Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9030 5189..5238 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9030.17112.1prot_S-dermatodea_contig9030.17112.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9030 267..5238 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9030.17112.1

>prot_S-dermatodea_contig9030.17112.1 ID=prot_S-dermatodea_contig9030.17112.1|Name=mRNA_S-dermatodea_contig9030.17112.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=834bp
MYGVSDVGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEV
PPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHD
LAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCR
NCSRIAVGGWGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFD
LPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGR
CERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIRE
MKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGA
YWEKVSGGSGSGESGANANTAGRSSTATAAGNGGGVTASSSARSSSQKAV
AAAEDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQTA
AQANMGTADVHAAAAAFSSTSAVRRGAQANVVVDVGMGAGVSSRAGVSSD
RLDGAENLQIARKGVALADERCAPAEGLGGAGIVGGVPGCANQAGGAAAS
ASRATEQVHEARPAKRLKGLSPWPERNATEWALPMREQAKVQPPPQQDNA
TGKMPPAAGKGNAPASGTPQGASAKVSPPVQRKGKAAAAAAAAGSIPREG
LKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNV
LEGGSYLSVAAAAGAGGGAPPLATTTLDFSNTIGRQLLGRRICFADFDAL
PDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASL
DVLLRRDWMDVELKTERLATMEAMASSRDTCDF*
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mRNA from alignment at S-dermatodea_contig9030:115..5400-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9030.17112.1 ID=mRNA_S-dermatodea_contig9030.17112.1|Name=mRNA_S-dermatodea_contig9030.17112.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5286bp|location=Sequence derived from alignment at S-dermatodea_contig9030:115..5400- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTGGTCCCCCGGCGGCCTCTAGTACGCCGCTGGCGTGGCAGAGCATCGA
GGCGGTGGGCAAGTGGCAACTGGGCGAGCCGGCGGTATTGAGGCGCACGA
TAGCTGAAAATGAGGCGGAAGAACACAACGTGATCAGGGGGTGTCCCGTG
GACACGTGCCCGATGTACGGTGTCAGCGACGTCGGGGCGGGCTGGATGTC
GCGACATCTCAAGTGAGTCTGGCGTAGTCAGCGGGGGAGGGTGAGGGTGG
AGCAAACGAATGACAATATTTTATACTTTTTTGCGATTTCCGTTTGCTTA
GCTCTACCGATGTAATCATTCGTGGCCACTAAATATTGGTGGATAACGAC
GCCAGAATATTCACCCCCTCCCACCCCAACACACCTGCGCCACCATCTTC
TCCTGTGATATTTGAGTAGCCCCGCGGGAAGAAACGCGCAATTTCCCCAT
GTCACTGAGCAAGCAACCTTACCCTGCCACGCCTTTTTTCGTGCTCAGGT
CGCATACGCAGACATCGGCGGAAAAACAGCAGACAGAAACGTACATCACA
ACCAGCGTGTTCGACCTCCTCCACGACATGTGCTTGGACGTCGAAGTGCC
GCCGGCGCAGCGCAAGCTCGAGAGACAGAGGAAGTCAAGGTCCGTGCTTG
CAGAATACGTAACGGCAACGACCGGGCCGGATAGCTCCGCGCCCAAACGC
CTGCTGCAGACCTCCCTCGAGTTTCCCCGGTCCATTTTTATGTGTTAGCA
AGTGCTTCCGTATATTTTGTGCGAGTGTTTCCGTTCTTTCTTTTTTTGTT
TTTTTCCGTGATCAATCGAACTTTGTCTGACCGCTGCTGGATGTTGAGAT
CAGCCAGAGTAAAAAACAACAACACGACCTCGACCGCACTATATATATCG
GTAACTCCCCTTCCCCTTGCCTTCGAATATTACTTCGTCGTCAGAGCTCT
CTTGAAGACCCCTCGAGCGGGCATAGGGCTCCAAGCCGCCCTCGTCGAGA
CGAAGGTGACGGGAAACAACGACGACCCTCTCGTCAGGTAGGCTCAGGCA
GACGCGTGTGTCGAGAGACTCCACCGGTGCATGCCCTTCTGCTGCTGTAG
TTCCCGCATCTCGAGGCTGCGATGCTCTCAGACACGCAGCTGGCGTCTGC
GTACTTTTCGTGTGTGTGTGTGTGTTTGTGTGTTGGATGTCGTGGGTCAA
ATATGTTGGCAATCGACAAGGCAGGCAGGTTCCTCGTCTGCCGCCTCTGG
GTATCTCGGTTTCCGTCGTGCTTCGGCGCTTCGAATCGATTTATTCCTCC
CCGCGGTAAGGGTGTGATCCGAATCACTACATACGCGATGCGGTTTAGCT
GCTGCTGTACGTGTGCATAGACTCCTACCCGCTGTGTCTTTAAGAAAACC
AACTCCGAAACCCTTCCCGCCATAACACCAACGATGCCGAATCGCCGCCC
GTCTCAGGCGGTGCGCGCACGACCTCGCCTTCGGCTCCTGCAAGGGCTTG
AACCATCCCGAGGCGATCGTGCGCTGCGACAAGTGCTACGCTTGGTTCCA
CATCTCCTGCGGCCAAATCGGGATTGGCAGCGGCATCAGCACCGCCCACT
CGTGGGACGAGACACTCTGCCGCAACTGCTCGCGCATAGCGGTGGGTGGC
TGGGGCAAGGACCCCGGGCCGGCGGTCGAGAAGCAGTCGTCCTTGATGCG
GGAGAAACGCCAGCACATGTTGGCTTTCCTCGAGGCGGAGGTGGAGAGCA
GTTGGCCCGAGGGGGTGTTCGACCTCCCTGTGAGTCGTTGGGGTTGGATT
ACTTCTGCACTTGCGGATGTGCGGTGTTTCGGTTTTCTTTCCCTTTCGTT
AACCTAGTGGTTGTCGCGGCGATCCTCGCGAGAACGTGCGTGCGCTGATT
TTGGGTACTCTTGTGACCTTTATATATATATACTTCGTATATATGTATTC
ACATCTGCCTGTCGCGCGCGAGTTTGTAGGAAGAGAGGACACGATATGCG
CTTATTGAGGCGCGTGTGCTGCCTGCATGGTCGCAAAGAGGCTACGCTTT
GCTTTTTGCAAGATATTCCGGAGGTATGGATGATGAAATTATTTCGGGTT
TGTTTTCATCCACGATGCAACCGGGTCCGCCGTGTATAAGCGGTCCAAAA
TATGCCGTGCCCCGTAGACCCGTCAATACTGTAACACCCACCCAAGCGTT
CATTCCTCCTTGCTGACTTTCCGGCGTCAACAGATCAGCGCAGAAGTCGG
GGCCACTCGAAACGCTCGTGGTCACGACGGAAAACGTGCCCCGAGTACCA
TCAACGCGGCTGAAGATGGGGGACCCAGCAGCGGCAGCAAAAAGGACCGC
AGGCCTCTATGCGCGGCAGGGCGGTGCGAGAGGGAGACCCGCCCAGACTC
GCGTTTTTGCTGTGACGGTTGCGGCGTTCTCAACGCGGAGTCTATGTTGT
GCGAAGCTCTGCGGCACTCTCTGGAACATCGGGTGGGCATCGAGCGCGGA
CGTCGGCTGCGGGAGATTCGGGAGATGAAGTTCCTGAAATCCGAGGTGAG
CGAAAGTGGAGGCGGGAACTCTGTCGGCTTCCAGACGGTTGCGTTTATTG
CGGCACGCGATACAGCGGGTGGAACAACAACTCTTGTGTATTTTCGGCTT
GTCAGCGTCTCTGGCCGCGGCCGAGCAGCCCTTCTCCGCGTGGGTTTTCC
CCACCCAACGCGGCCCTCGTGTGCGGCTGGCTCCCTCCTTCGTTTGTCGC
CTCGCTTCAGGTGGGATTGGCGATGAAGAGGTTGCAGCAGCCGCGACCCC
CCGAAATCACGCTGCAGCACGAGAGCATGTTGCGTGCCCTGGTGGAAAGG
AGGCGGCGCCTCTGGAAGCGGTTGATCGAAATCGGAGCGTACTGGGAGAA
GGTGTCGGGGTCGAGGAGCCTGCCGCAAGTCGCCGGCACCAAGCAGGCGC
GAGCGATTCAGACCGGCCCGGCTTCTGGGGGTCAGGTTGCGGCGGGTCAG
AAAGTGCGGCACCAGGGAATCCAGGGTGGCGGCGGCGGCGGTAGTAGCGG
CAGCGGTAGCGGCGAAAGCGGAGCTAACGCCAACACTGCTGGACGAAGCA
GCACGGCGACCGCGGCGGGGAATGGCGGAGGCGTAACGGCCTCGAGTTCC
GCCCGCTCGTCGTCACAGAAAGCCGTTGCGGCCGCAGAAGATGGGCGGGG
TAATGGCGGCGCCGACGTCGAAATGGCGGAAGCAGCTGGCAGGGGCGGCG
CGCAGGGGACTACGGAGTCGGGTCAGAAAGCGGCGCAGATCGGCGACAAC
GTGGGCCCACAGACGCCACAGACGGCCGCACAAGCAAATATGGGAACGGC
CGATGTACACGCTGCTGCGGCAGCTTTTTCGAGTACCTCGGCCGTGCGAC
GAGGGGCGCAAGCCAACGTAGTAGTCGATGTTGGCATGGGCGCCGGCGTT
TCCTCTAGAGCAGGCGTTTCGTCGGATCGCTTGGATGGCGCGGAAAATCT
CCAAATCGCGCGGAAAGGCGTGGCTCTGGCAGACGAGAGATGTGCACCGG
CGGAAGGTTTGGGCGGAGCAGGCATCGTTGGAGGGGTGCCGGGATGTGCA
AACCAGGCGGGGGGCGCAGCGGCCTCCGCTAGCCGTGCTACCGAGCAGGT
GCACGAGGCGAGGCCCGCGAAGAGGCTGAAAGGTTTATCGCCGTGGCCGG
AAAGAAACGCGACAGAGTGGGCGCTACCGATGCGAGAGCAAGCGAAGGTG
CAACCGCCGCCGCAGCAAGATAATGCAACAGGGAAAATGCCACCGGCGGC
GGGAAAAGGAAATGCGCCGGCGTCGGGAACGCCGCAAGGAGCAAGCGCTA
AGGTGTCGCCGCCGGTACAGCGTAAAGGAAAGGCGGCGGCGGCGGCGGCG
GCAGCTGGCTCGATACCGCGGGAGGGGTTGAAGCACATGATGTGCATCTA
CTGCGGAAAGGAGACCGGACAGGAGGTGACCGAGCACCTAGAAGAGTGCT
ATCGGCGGGTGAGTACTTGCTCGTTGTTCCAATGCTCTTCTTGATACTTG
CTCCGGAGATTATGGCCCCGCACATGGGTGCAGTACCAGTATAATGAGAG
CTGTATGTTGGCCGAGTGCATGTGTGGTGTACGCCATGAGTTCGTCGCGC
ATGGACGATCCAGTCCGAACGAGGCCTCCGCTTCTCGGGACATCGCTTCG
TATTCCCATCTCTTGCCAGCACCAAAACCACCACAACCACCACTCTCCTT
CCGCGCGTTTGCAATCATCACTCCGCACCCTCCACCCTTCCCGAACACCG
CCGCGCAGGTGGCAGCCTTACGCAACGAACGCCTGGACTCCGCGACACTG
CGCCCGCTCCCTGAGCGACCCAACGTGCTGGAGGGGGGCTCCTACTTGTC
GGTAGCGGCGGCGGCGGGGGCGGGGGGCGGGGCGCCTCCCCTCGCTACAA
CGACGCTCGATTTCTCCAACACCATAGGCAGGCAGCTGCTTGGGCGCCGT
ATCTGCTTCGCGGACTTCGACGCTCTTCCCGACCCGACACAGTTCCAGCT
TCACAACGACCTTAAGGGCTGGATGGGTTCGTCGTCACGCTTGGACTTCC
TGTACAAGGAGCTGGTCCGACAGCGGAATGCAGCGGTATTATTAAGCCAG
CGGGAGTGGGTGGGGGGGTCTTATAGTAGAGCTGCAAGTGTTTGTGCGCA
CGCACACGCGCGCGTTTTCCGTTCGTATTTGTTACTGAATTAATTCGGCG
CTGTGGGTTGATTTGGGCGTGTCGTTGTCGCACGCCGCCAGGTTTCGTGG
GGTTAGCCAAATTGAGAAAAGTCGGCGACACGTATTTTCGTTCGTCCGCA
AAAGCAAGACCCATTCCCGTAATTATTTTGCTGGCTGCTTCGCATCATCG
TTTTTGGAAGTTTGATCTTGAACCCTATCGATACCCACTGGTATTTCCGT
CGTTGCTCTCTCGAAAAAACTGTCCCATCTCGTGCCCCAGATCCACGAAC
TGCAAGCGCTGGAGAGAGACGAGGCCTCGCTTGATGTGCTCCTACGCCGG
GATTGGATGGATGTGGAGCTCAAAACGGAGCGCCTCGCCACCATGGAGGC
GATGGCATCGTCAAGAGACACTTGTGATTTCTAGTAGATTGTGCAACGCA
GGTGCCGGGGTTTCCGAGAAGTTCGGTGGATGTCCCACCACGTTTGACAG
CGTTGTTCAAAATCACCTATAATACCAAGGTGCTCCTCAATCGCTTCTTG
AGTGCAACGTCGCCTTGCGGACTGCATGCCCGGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9030:115..5400-

>mRNA_S-dermatodea_contig9030.17112.1 ID=mRNA_S-dermatodea_contig9030.17112.1|Name=mRNA_S-dermatodea_contig9030.17112.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5004bp|location=Sequence derived from alignment at S-dermatodea_contig9030:115..5400- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTACGGTGTCAGCGACGTCGGGGCGGGCTGGATGTCGCGACATCTCAA
ATGTACGGTGTCAGCGACGTCGGGGCGGGCTGGATGTCGCGACATCTCAA
GTCGCATACGCAGACATCGGCGGAAAAACAGCAGACAGAAACGTACATCA
CAACCAGCGTGTTCGACCTCCTCCACGACATGTGCTTGGACGTCGAAGTG
CCGCCGGCGCAGCGCAAGCTCGAGAGACAGAGGAAGTCAAGGTCGCATAC
GCAGACATCGGCGGAAAAACAGCAGACAGAAACGTACATCACAACCAGCG
TGTTCGACCTCCTCCACGACATGTGCTTGGACGTCGAAGTGCCGCCGGCG
CAGCGCAAGCTCGAGAGACAGAGGAAGTCAAGAGCTCTCTTGAAGACCCC
TCGAGCGGGCATAGGGCTCCAAGCCGCCCTCGTCGAGACGAAGGTGACGG
GAAACAACGACGACCCTCTCGTCAGAGCTCTCTTGAAGACCCCTCGAGCG
GGCATAGGGCTCCAAGCCGCCCTCGTCGAGACGAAGGTGACGGGAAACAA
CGACGACCCTCTCGTCAGGCGGTGCGCGCACGACCTCGCCTTCGGCTCCT
GCAAGGGCTTGAACCATCCCGAGGCGATCGTGCGCTGCGACAAGTGCTAC
GCTTGGTTCCACATCTCCTGCGGCCAAATCGGGATTGGCAGCGGCATCAG
CACCGCCCACTCGTGGGACGAGACACTCTGCCGCAACTGCTCGCGCATAG
CGGTGGGTGGCTGGGGCAAGGACCCCGGGCCGGCGGTCGAGAAGCAGTCG
TCCTTGATGCGGGAGAAACGCCAGCACATGTTGGCTTTCCTCGAGGCGGA
GGTGGAGAGCAGTTGGCCCGAGGGGGTGTTCGACCTCCCTGTGAGTCGTT
GGGGCGGTGCGCGCACGACCTCGCCTTCGGCTCCTGCAAGGGCTTGAACC
ATCCCGAGGCGATCGTGCGCTGCGACAAGTGCTACGCTTGGTTCCACATC
TCCTGCGGCCAAATCGGGATTGGCAGCGGCATCAGCACCGCCCACTCGTG
GGACGAGACACTCTGCCGCAACTGCTCGCGCATAGCGGTGGGTGGCTGGG
GCAAGGACCCCGGGCCGGCGGTCGAGAAGCAGTCGTCCTTGATGCGGGAG
AAACGCCAGCACATGTTGGCTTTCCTCGAGGCGGAGGTGGAGAGCAGTTG
GCCCGAGGGGGTGTTCGACCTCCCTGTGAGTCGTTGGGAAGTCGGGGCCA
CTCGAAACGCTCGTGGTCACGACGGAAAACGTGCCCCGAGTACCATCAAC
GCGGCTGAAGATGGGGGACCCAGCAGCGGCAGCAAAAAGGACCGCAGGCC
TCTATGCGCGGCAGGGCGGTGCGAGAGGGAGACCCGCCCAGACTCGCGTT
TTTGCTGTGACGGTTGCGGCGTTCTCAACGCGGAGTCTATGTTGTGCGAA
GCTCTGCGGCACTCTCTGGAACATCGGGTGGGCATCGAGCGCGGACGTCG
GCTGCGGGAGATTCGGGAGATGAAGTTCCTGAAATCCGAGAAGTCGGGGC
CACTCGAAACGCTCGTGGTCACGACGGAAAACGTGCCCCGAGTACCATCA
ACGCGGCTGAAGATGGGGGACCCAGCAGCGGCAGCAAAAAGGACCGCAGG
CCTCTATGCGCGGCAGGGCGGTGCGAGAGGGAGACCCGCCCAGACTCGCG
TTTTTGCTGTGACGGTTGCGGCGTTCTCAACGCGGAGTCTATGTTGTGCG
AAGCTCTGCGGCACTCTCTGGAACATCGGGTGGGCATCGAGCGCGGACGT
CGGCTGCGGGAGATTCGGGAGATGAAGTTCCTGAAATCCGAGGTGGGATT
GGCGATGAAGAGGTTGCAGCAGCCGCGACCCCCCGAAATCACGCTGCAGC
ACGAGAGCATGTTGCGTGCCCTGGTGGAAAGGAGGCGGCGCCTCTGGAAG
CGGTTGATCGAAATCGGAGCGTACTGGGAGAAGGTGTCGGGGTGGGATTG
GCGATGAAGAGGTTGCAGCAGCCGCGACCCCCCGAAATCACGCTGCAGCA
CGAGAGCATGTTGCGTGCCCTGGTGGAAAGGAGGCGGCGCCTCTGGAAGC
GGTTGATCGAAATCGGAGCGTACTGGGAGAAGGTGTCGGGCGGCAGCGGT
AGCGGCGAAAGCGGAGCTAACGCCAACACTGCTGGACGAAGCAGCACGGC
GACCGCGGCGGGGAATGGCGGAGGCGTAACGGCCTCGAGTTCCGCCCGCT
CGTCGTCACAGAAAGCCGTTGCGGCCGCAGAAGATGGGCGGGGTAATGGC
GGCGCCGACGTCGAAATGGCGGAAGCAGCTGGCAGGGGCGGCGCGCAGGG
GACTACGGAGTCGGGTCAGAAAGCGGCGCAGATCGGCGACAACGTGGGCC
CACAGACGCCACAGACGGCCGCACAAGCAAATATGGGAACGGCCGATGTA
CACGCTGCTGCGGCAGCTTTTTCGAGTACCTCGGCCGTGCGACGAGGGGC
GCAAGCCAACGTAGTAGTCGATGTTGGCATGGGCGCCGGCGTTTCCTCTA
GAGCAGGCGTTTCGTCGGATCGCTTGGATGGCGCGGAAAATCTCCAAATC
GCGCGGAAAGGCGTGGCTCTGGCAGACGAGAGATGTGCACCGGCGGAAGG
TTTGGGCGGAGCAGGCATCGTTGGAGGGGTGCCGGGATGTGCAAACCAGG
CGGGGGGCGCAGCGGCCTCCGCTAGCCGTGCTACCGAGCAGGTGCACGAG
GCGAGGCCCGCGAAGAGGCTGAAAGGTTTATCGCCGTGGCCGGAAAGAAA
CGCGACAGAGTGGGCGCTACCGATGCGAGAGCAAGCGAAGGTGCAACCGC
CGCCGCAGCAAGATAATGCAACAGGGAAAATGCCACCGGCGGCGGGAAAA
GGAAATGCGCCGGCGTCGGGAACGCCGCAAGGAGCAAGCGCTAAGGTGTC
GCCGCCGGTACAGCGTAAAGGAAAGGCGGCGGCGGCGGCGGCGGCAGCTG
GCTCGATACCGCGGGAGGGGTTGAAGCACATGATGTGCATCTACTGCGGA
AAGGAGACCGGACAGGAGGTGACCGAGCACCTAGAAGAGTGCTATCGGCG
GCGGCAGCGGTAGCGGCGAAAGCGGAGCTAACGCCAACACTGCTGGACGA
AGCAGCACGGCGACCGCGGCGGGGAATGGCGGAGGCGTAACGGCCTCGAG
TTCCGCCCGCTCGTCGTCACAGAAAGCCGTTGCGGCCGCAGAAGATGGGC
GGGGTAATGGCGGCGCCGACGTCGAAATGGCGGAAGCAGCTGGCAGGGGC
GGCGCGCAGGGGACTACGGAGTCGGGTCAGAAAGCGGCGCAGATCGGCGA
CAACGTGGGCCCACAGACGCCACAGACGGCCGCACAAGCAAATATGGGAA
CGGCCGATGTACACGCTGCTGCGGCAGCTTTTTCGAGTACCTCGGCCGTG
CGACGAGGGGCGCAAGCCAACGTAGTAGTCGATGTTGGCATGGGCGCCGG
CGTTTCCTCTAGAGCAGGCGTTTCGTCGGATCGCTTGGATGGCGCGGAAA
ATCTCCAAATCGCGCGGAAAGGCGTGGCTCTGGCAGACGAGAGATGTGCA
CCGGCGGAAGGTTTGGGCGGAGCAGGCATCGTTGGAGGGGTGCCGGGATG
TGCAAACCAGGCGGGGGGCGCAGCGGCCTCCGCTAGCCGTGCTACCGAGC
AGGTGCACGAGGCGAGGCCCGCGAAGAGGCTGAAAGGTTTATCGCCGTGG
CCGGAAAGAAACGCGACAGAGTGGGCGCTACCGATGCGAGAGCAAGCGAA
GGTGCAACCGCCGCCGCAGCAAGATAATGCAACAGGGAAAATGCCACCGG
CGGCGGGAAAAGGAAATGCGCCGGCGTCGGGAACGCCGCAAGGAGCAAGC
GCTAAGGTGTCGCCGCCGGTACAGCGTAAAGGAAAGGCGGCGGCGGCGGC
GGCGGCAGCTGGCTCGATACCGCGGGAGGGGTTGAAGCACATGATGTGCA
TCTACTGCGGAAAGGAGACCGGACAGGAGGTGACCGAGCACCTAGAAGAG
TGCTATCGGCGGGTGGCAGCCTTACGCAACGAACGCCTGGACTCCGCGAC
ACTGCGCCCGCTCCCTGAGCGACCCAACGTGCTGGAGGGGGGCTCCTACT
TGTCGGTAGCGGCGGCGGCGGGGGCGGGGGGCGGGGCGCCTCCCCTCGCT
ACAACGACGCTCGATTTCTCCAACACCATAGGCAGGCAGCTGCTTGGGCG
CCGTATCTGCTTCGCGGACTTCGACGCTCTTCCCGACCCGACACAGTTCC
AGCTTCACAACGACCTTAAGGGCTGGATGGGTTCGTCGTCACGCTTGGAC
TTCCTGTACAAGGAGCTGGTCCGACAGCGGAATGCAGCGGTGGCAGCCTT
ACGCAACGAACGCCTGGACTCCGCGACACTGCGCCCGCTCCCTGAGCGAC
CCAACGTGCTGGAGGGGGGCTCCTACTTGTCGGTAGCGGCGGCGGCGGGG
GCGGGGGGCGGGGCGCCTCCCCTCGCTACAACGACGCTCGATTTCTCCAA
CACCATAGGCAGGCAGCTGCTTGGGCGCCGTATCTGCTTCGCGGACTTCG
ACGCTCTTCCCGACCCGACACAGTTCCAGCTTCACAACGACCTTAAGGGC
TGGATGGGTTCGTCGTCACGCTTGGACTTCCTGTACAAGGAGCTGGTCCG
ACAGCGGAATGCAGCGATCCACGAACTGCAAGCGCTGGAGAGAGACGAGG
CCTCGCTTGATGTGCTCCTACGCCGGGATTGGATGGATGTGGAGCTCAAA
ACGGAGCGCCTCGCCACCATGGAGGCGATGGCATCGTCAAGAGACACTTG
TGATTTCTAGATCCACGAACTGCAAGCGCTGGAGAGAGACGAGGCCTCGC
TTGATGTGCTCCTACGCCGGGATTGGATGGATGTGGAGCTCAAAACGGAG
CGCCTCGCCACCATGGAGGCGATGGCATCGTCAAGAGACACTTGTGATTT
CTAG
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