prot_S-dermatodea_contig9030.17112.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9030.17112.1
Unique Nameprot_S-dermatodea_contig9030.17112.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length834
Homology
BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 1.850e-159
Identity = 355/865 (41.04%), Postives = 453/865 (52.37%), Query Frame = 0
Query:    3 GVSD-VGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEVPPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHDLAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCRNCSRIAVGG-WGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFDLPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGRCERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIREMKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGAYWEKVSGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQT---------AAQANMGTADVHAAAAAFSSTSAVRRGAQANVVVDVGMGAGVSSRAGVSSDRLDGAENLQIARKGVALADERCAPAEGL---GGAGIVGGVPGCANQAGXXXXXXXRATEQVHEAR-PAKRLKGLSPWPERNATEWALPMREQAKVQPPPQQDNATGK------MPPAAGK--------------------GNAPASGTPQGASAKVSPP------VQRKGKAAAAA-----AAAGSIPREGLKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNVLEGGSYLSVAAXXXXXXXXPPLATTTLDFSNTIGRQLLGRRICFADFDALPDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASLDVLLRRDWMDVELKT 815
            G SD +   WM+RHL+SHT+ + EK Q E YI +SV ++LH+MCLD EVP AQRK ER++ SRALL TPRAGIG  A ++ET VTG+N  P VRRCAHDLA G C+G+     IVRCDKC AW+H+SCGQ+  G GIS+  + +ETLCR C+RIA+G   GKDP   ++KQ SL+REKR  ML FLE +VE+  P GVFDLP++  +V         DG           +GG     K+D RP CAA  C RE+R DS+FCCD CGVL+AE+ L +A+RH +E   GI+RGRRLRE RE+K  K +VGLAMK+++ PR P    + E+ L ALV R+ RLW+RLIEIGAYWEKVSG                      XXXX                      GR  GG    +A A+  GG Q   + G                          A +  +G                  +GA    V   G GA   +R          A++L+    G A        A G+   GG   +   P  A   G       +A      A  P   ++  S  PE             A++        + GK       PP  G+                    G  P   T  G   K +PP       +R    +  A     AA    P  G+++ MC+YCG+ETG  V+EHLE CYR+  A+RNERL  ATLRPL +  + L+GGS L  A+        P  A   LD    IGRQLL RRI +A+FD+LPDP++FQLH+DLKGW  S SRLDFLYKELVRQRNAAI+ELQAL+R+EA L+V LR DWM  +L++
Sbjct:  440 GSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSRALLDTPRAGIGHLAGMIETVVTGDNKSPHVRRCAHDLAVGGCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRTCARIAIGAPQGKDPTATLQKQLSLVREKRTKMLEFLEEDVETGAPCGVFDLPLNIRDVSTAGGVGPKDGNANGPDAGGNSNGGNGGVDKRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHALVVRKCRLWQRLIEIGAYWEKVSGSRVGVLAATRTAAQTSSRKATAXXXXSVTASGAVDPALSRSAPERLAGGRDRGGV---IASASSSGGVQVELDVGXXXXXXXXXXXXXXXXXXXXEAEVSGAGKEVVGXXXXXXXXXXXXXXGTEGQGASNGCVGWEGGGAKKRAREDGDGPPQQAAKSLKQTSNGEA--------ASGIDVGGGGAAITEPPSAAVAMGAQSKGKGKAALDPQAAESPTAAMEVSSADPEAEIDTGLEVPDTMAEIAGQAWTYGSFGKERVLWYCPPGGGEADRCTSSEQLQAYLRERYGNGRVPGQFTFSG---KDAPPQWERVDARRPDNGSLIAKDKDKAAVPPPPSGGVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPLRDN-HFLQGGSRLGAASVTEPVSVPPSAA---LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRS 1286          
BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 487 bits (1254), Expect = 5.840e-152
Identity = 361/880 (41.02%), Postives = 462/880 (52.50%), Query Frame = 0
Query:    3 GVSD-VGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEVPPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHDLAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCRNCSRIAVGG-WGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFDLPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGRCERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIREMKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGAYWEKVSGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQTAAQANMGTADVHAAAAAFSSTSAVR--------------------RGAQANVVVDVGMGAGVSSRAGVSSDRLDGAENLQIARKGVALADERCAPAEGL---GGAGIVGGVPGCAN---------------QAGXXXXXXXRATEQVHEARPAKRLKGLSPWPERNATEWALPMREQAKVQ---PPP--QQDNATGKMPPAA------GKGNAPASGTPQGASAKVSPP----------------VQRKGKAAAAAAAAGSIPREGLKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNVLEGGSYLSVAAXXXXXXXXPPLATTTLDFSNTIGRQLLGRRICFADFDALPDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASLDVLLRRDWMDVELKT 815
            G SD +   WM+RHL+SHT+ + E+ Q E YI +SV ++LH+MCLD EVP AQRK ER++ +RALL TPRAGIG  A ++ET VTG+N DP VR   H+   G C+G+     IVRCDKC AW+H+SCGQ+  G GIS+  + +ETLCR C+RI +G   GKDP   ++KQ SL+REKR  ML FLE +VE+  P GVFDLP++  +V         DG           +GG      +D RP CAA  C RE+R DS+FCCD CGVL+AE+ L +A+RH +E   GI+RGRRLRE RE+K  K +VGLAMK+++ PR P    + E+ L  LV RR RLW+RLIEIGAYWEKVSG                    XXXXXXXXXX                   R  GG+   +A  +G GG Q   + G      G ++       AA A   TA+                                   +GA    V   G GA   +R G        A +L+    G A        A G+   GG+  +   P  A                QA          +    EA   K L+G     E     W     ++ +V    PP   + D  T +    A      G G  P   T  G   K +PP                 + K KAA   +     P  G+++  C+YCG+ETG  V+EHLE CYR+  A+RNERL  ATLRPLP+  + L+GGS L  AA        PP A   LD    IGRQLL RRI +A+FD+LPDP++FQLH+DLKGW  S SRLDFLYKELVRQRNAAI+ELQAL+R+EA L+V LR DWM  +L++
Sbjct:  420 GSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMARALLDTPRAGIGHLAGVMETMVTGDNKDPHVR---HEPQEGXCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRACARITIGAPQGKDPTATLQKQLSLVREKRTKMLEFLERDVETGTPCGVFDLPLNIRDVNTAGGVELKDGNAKGPAAGGNSNGGNGGVDMRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHGLVARRCRLWQRLIEIGAYWEKVSGSRVGVLAATKTAAQTSSRKAXXXXXXXXXXSGAFDPALSRSAPQRQTGVRDRGGS---IASVSGSGGIQVELDVG------GCSI-------AAAAKNDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGASNICVGWEGGGAKKRAREGGDGPSQQAANSLKQTSNGEA--------ASGIDVGGGSAAIPETPSAAAMGAHSKGKGKAALDPQAAESTTAATDVSSADPEAEIDKGLEGPDTTAEIAGKAWTYGSFDKERVLWYCPPGGREADRCTNREQLQAYLRERYGNGRVPGQFTFSG---KDAPPHWERVDAHCPDNGSLIAKHKDKAAVPPS-----PSGGVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDN-HFLQGGSRLG-AASVTEPVSLPPSAC--LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRS 1260          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9030.17112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI1.850e-15941.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE5.840e-15241.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 776..796
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 100..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9030contigS-dermatodea_contig9030:267..5238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9030.17112.1mRNA_S-dermatodea_contig9030.17112.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9030 115..5400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9030.17112.1 ID=prot_S-dermatodea_contig9030.17112.1|Name=mRNA_S-dermatodea_contig9030.17112.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=834bp
MYGVSDVGAGWMSRHLKSHTQTSAEKQQTETYITTSVFDLLHDMCLDVEV
PPAQRKLERQRKSRALLKTPRAGIGLQAALVETKVTGNNDDPLVRRCAHD
LAFGSCKGLNHPEAIVRCDKCYAWFHISCGQIGIGSGISTAHSWDETLCR
NCSRIAVGGWGKDPGPAVEKQSSLMREKRQHMLAFLEAEVESSWPEGVFD
LPVSRWEVGATRNARGHDGKRAPSTINAAEDGGPSSGSKKDRRPLCAAGR
CERETRPDSRFCCDGCGVLNAESMLCEALRHSLEHRVGIERGRRLREIRE
MKFLKSEVGLAMKRLQQPRPPEITLQHESMLRALVERRRRLWKRLIEIGA
YWEKVSGGSGSGESGANANTAGRSSTATAAGNGGGVTASSSARSSSQKAV
AAAEDGRGNGGADVEMAEAAGRGGAQGTTESGQKAAQIGDNVGPQTPQTA
AQANMGTADVHAAAAAFSSTSAVRRGAQANVVVDVGMGAGVSSRAGVSSD
RLDGAENLQIARKGVALADERCAPAEGLGGAGIVGGVPGCANQAGGAAAS
ASRATEQVHEARPAKRLKGLSPWPERNATEWALPMREQAKVQPPPQQDNA
TGKMPPAAGKGNAPASGTPQGASAKVSPPVQRKGKAAAAAAAAGSIPREG
LKHMMCIYCGKETGQEVTEHLEECYRRVAALRNERLDSATLRPLPERPNV
LEGGSYLSVAAAAGAGGGAPPLATTTLDFSNTIGRQLLGRRICFADFDAL
PDPTQFQLHNDLKGWMGSSSRLDFLYKELVRQRNAAIHELQALERDEASL
DVLLRRDWMDVELKTERLATMEAMASSRDTCDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD