prot_S-dermatodea_contig8912.17008.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8912.17008.1
Unique Nameprot_S-dermatodea_contig8912.17008.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length128
Homology
BLAST of mRNA_S-dermatodea_contig8912.17008.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.400e-33
Identity = 78/123 (63.41%), Postives = 91/123 (73.98%), Query Frame = 0
Query:   16 FRSLSGG-ERLLLAPKSSDDALLGPEFAVENSSRDTELLENLGVRRVGKGVFFREHVLPKTIG---------RNLPVEASQAAIISVLSNLQDLCAEDSSLEAAIRSSQVVTNGSGEPKLISD 128
            F S+SG  +RLLLAPK +D  LLGP FAVE SS DTELLE+LGV+RVGKG FFREHVLP             R++   ASQAA ++VLSNLQ+LCAED  LEAA+R+SQVVT+G GEP  ISD
Sbjct: 1459 FTSISGAADRLLLAPKGTDPVLLGPVFAVE-SSVDTELLESLGVQRVGKGAFFREHVLPGVAAESRAGAAGSRHVGGGASQAATVTVLSNLQELCAEDPGLEAALRASQVVTDGGGEPAQISD 1580          
BLAST of mRNA_S-dermatodea_contig8912.17008.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 4.940e-30
Identity = 81/151 (53.64%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   16 FRSLSGG-ERLLLAPKSSDDALLGPEFAVENSSRDTELLENLGVRRVGKGVFFREHVLP--------------KTIGRNLP-----------------------VEASQAAIISVLSNLQDLCAEDSSLEAAIRSSQVVTNGSGEPKLISD 128
            F S+SG  +RLLLAPK +D ALLGP FAVE SS DTELLE+LGV+RVGKG FFREHVLP              +  G   P                       + ASQAA I+VLSNLQ+LCAED  LEAA+R+SQVVT+G GEP  ISD
Sbjct: 2154 FTSISGAADRLLLAPKGTDPALLGPVFAVE-SSEDTELLESLGVQRVGKGAFFREHVLPGLAAESRAGAAGSRQVGGGGYPPSGDRKATPGTVGAVGSSTGEALLGASQAATITVLSNLQELCAEDPGLEAALRASQVVTDGGGEPAQISD 2303          
BLAST of mRNA_S-dermatodea_contig8912.17008.1 vs. uniprot
Match: A0A5C7HIP1_9ROSI (RING-type domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HIP1_9ROSI)

HSP 1 Score: 55.1 bits (131), Expect = 3.510e-6
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   24 RLLLAPKSSDDALLGPEFAVENSS-RDTELLENLGVRRVGKGVFFREHVLPKTIGRNLPVEASQAAIISVLSNLQDLCAEDSSLEAAIRSSQVVTNGSG 121
            R  L P    + LLG EF + +SS  +  LL   G+ R+GK  F+R+ V  +   R+L  +     ++SVL NL  LCAED+S    +R+ + V   SG
Sbjct:  847 RKYLPPLDVPEGLLGFEFIICSSSIEENILLRYYGIERMGKACFYRKKVFNRV--RDLQPDIRDRVMLSVLPNLPQLCAEDTSFRECLRNLEFVPTLSG 943          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8912.17008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K688_9PHAE5.400e-3363.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG5_ECTSI4.940e-3053.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5C7HIP1_9ROSI3.510e-636.36RING-type domain-containing protein n=1 Tax=Acer y... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8912contigS-dermatodea_contig8912:6734..7387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8912.17008.1mRNA_S-dermatodea_contig8912.17008.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8912 6734..7387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8912.17008.1 ID=prot_S-dermatodea_contig8912.17008.1|Name=mRNA_S-dermatodea_contig8912.17008.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=128bp
GPGAGVEHRRSAGAIFRSLSGGERLLLAPKSSDDALLGPEFAVENSSRDT
ELLENLGVRRVGKGVFFREHVLPKTIGRNLPVEASQAAIISVLSNLQDLC
AEDSSLEAAIRSSQVVTNGSGEPKLISD
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