prot_S-dermatodea_contig888.16991.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig888.16991.1
Unique Nameprot_S-dermatodea_contig888.16991.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length454
Homology
BLAST of mRNA_S-dermatodea_contig888.16991.1 vs. uniprot
Match: A0A6H5LL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL79_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 2.540e-81
Identity = 203/509 (39.88%), Postives = 252/509 (49.51%), Query Frame = 0
Query:    1 MISQADFEDAARGGLGGKRDRRKVRRRPATVGMDVGHG-WSCAGRSGEQICWPRYEDICLVTAGVRGAVLLDSRRAPLSCPPLADVLRTLQDKFEERHG-----------GGCDCSGQDIECLGILRLEGTCFLVNRAVLLSRLGNLVACPEAALSGSTALSRDSAATVADEARSTSASQFVADRLWPG---GGGALGRERGF---ALLDVRKIVGVPTVCTDVLIPRLCAALRSMFSGDEIGNLQTPPTADLGGGASPEGPPAKSTR---AWDARADSTTET---SGDG------------RRWLKDWKSKELILGGKDLRKTLGGIGLPGLAGWLLEYPVIYCCPSLSE--SEQGKGEAESGDAGNCLAAAPLTVYSLLVEFGQEAARNSRDSVSS------------FEAFSFSVPETAVRCPVDFETPDESTAGGRGGGDPA------VVAALHGLVENFVERINARVALHSGSGASVGGCQEHRRWLHGLKMSKRTETLNTVAL 453
            +I +ADFE A R    G   + K R RP    +D   G WS AG S  Q  WPR+ D+CLV AGVR AVLLDSRRAP   PPLADVL  +Q   +ER               CDCS   + CLG+L LEG+ FLVNR +L+ RL  L +    A   +  + R S+       +    S + A+ + P       A  R  G+    LLDV K + VP+  +DVL PRLCAAL   F G  +               SP  PP  ++R   A +  A S  E     GDG             RWL+D   KELIL  + L KTLG +GL GLAGWLLEYPVIYCC SL++  S    G+      GNCLAA PLTVYS  V+ G +    S  S  S            F+AFSFSVPET    P + E  ++   GG   G+          AALHGLV+NFV+ I+ R+A   GSG +  G          L + KR  TL+ VAL
Sbjct:    2 LIEEADFERACRAAGRGVAPQHKTRVRPRAAAVDSNDGDWSVAGGSRSQTFWPRFGDVCLVAAGVRCAVLLDSRRAPRGFPPLADVLLAMQHDQQERQQQKERCATRDCHSDCDCSSGGVACLGLLVLEGSSFLVNRVMLVHRLNELFSGETIAAQQADEMFRRSSTCATGCGKK---SGYEAEAVRPAVDVAASAHQRRLGWRDSTLLDVNKALAVPSDRSDVLAPRLCAALLWAFGGATVAATANSVEGGRASRPSPTPPPRGTSRESMAMETPAKSNKEDRFCGGDGVHRVLPSELEGGARWLRDLSMKELILDCESLVKTLGDVGLSGLAGWLLEYPVIYCCSSLNDGTSNGSDGKEMEHARGNCLAAVPLTVYSFAVDLGDKGRGCSSRSQPSLDERSVSATGAWFDAFSFSVPETMCG-PTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRGSGDNGNGS------FLSLNVFKRRATLDQVAL 500          
BLAST of mRNA_S-dermatodea_contig888.16991.1 vs. uniprot
Match: D7FQ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ91_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.400e-80
Identity = 203/509 (39.88%), Postives = 253/509 (49.71%), Query Frame = 0
Query:    1 MISQADFEDAARGGLGGKRDRRKVRRRPATVGMDVGHG-WSCAGRSGEQICWPRYEDICLVTAGVRGAVLLDSRRAPLSCPPLADVLRTLQDKFEERHG-----------GGCDCSGQDIECLGILRLEGTCFLVNRAVLLSRLGNLVACPEAALSGSTALSRDSAATVAD-EARSTSASQFVADRLWPGGGGALGRERGF-----ALLDVRKIVGVPTVCTDVLIPRLCAALRSMFSGDEIGNLQTPPTADLGGGASPEGPPAKSTR---AWDARADSTTET---SGDG------------RRWLKDWKSKELILGGKDLRKTLGGIGLPGLAGWLLEYPVIYCCPSLSESEQGKGEAESGD--AGNCLAAAPLTVYSLLVEFGQEAARNSRDSVSS------------FEAFSFSVPETAVRCPVDFETPDESTAGGRGGGDPA------VVAALHGLVENFVERINARVALHSGSGASVGGCQEHRRWLHGLKMSKRTETLNTVAL 453
            +I +ADFE A R    G   + K R RP    +D   G WS AG S  Q  WPR+ DICL  AGVR AVLLDSRRAP   PPLADVL  LQ   +ER               CDC+   + CLG+L LEG+ FLVNR +L+ RL  L +    A        R SA    D + +S   ++ V   +    G A   +R F     ALLDV   + VP+  +DVL PRL AAL   F G  +             G SP  PP  ++R   A +  A S  E     GDG             RWL+DW  KEL+L  + L KTLG +GL G+AGWLLEYP IYCC SL++      + +  +   GNCLAA PLTVYSL V+ G +   +S     S            FEAFSFSVPE A+  P + E  ++   GG   G+          AALHGLV+NFV+ I+ R+A    SG  V G          L +SKR  TL+ VAL
Sbjct:    2 LIEEADFERACRAAARGVAPQHKRRVRPRAAAVDSNDGDWSVAGGSRSQTFWPRFGDICLAAAGVRCAVLLDSRRAPRRSPPLADVLLALQHDQQERQQQKEHCATRDCHSDCDCNSGGVACLGLLVLEGSSFLVNRVMLVRRLNELFSGETIAAEPVDERFRRSATCATDCDKKSGYGTEAVRPAV---DGAASAHQRHFDRRDLALLDVNMALAVPSDRSDVLAPRLYAALLWAFGGATVAATANSVEEGRARGPSPTPPPRGTSRESTAMETSAKSNREDRFCGGDGVHRVPPSELEGGARWLRDWSMKELVLDCESLVKTLGDVGLSGMAGWLLEYPAIYCCSSLNDGTTNGSDGKEMEHARGNCLAAVPLTVYSLAVDLGDKGRGSSSRPQPSLDERSASVTGAWFEAFSFSVPE-AMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRRSG--VNGNDSFL----SLNVSKRRATLDQVAL 500          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig888.16991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LL79_9PHAE2.540e-8139.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ91_ECTSI1.400e-8039.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027850Protein of unknown function DUF4504PFAMPF14953DUF4504coord: 292..371
e-value: 3.4E-8
score: 33.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig888contigS-dermatodea_contig888:18250..20565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig888.16991.1mRNA_S-dermatodea_contig888.16991.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig888 17430..20775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig888.16991.1 ID=prot_S-dermatodea_contig888.16991.1|Name=mRNA_S-dermatodea_contig888.16991.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=454bp
MISQADFEDAARGGLGGKRDRRKVRRRPATVGMDVGHGWSCAGRSGEQIC
WPRYEDICLVTAGVRGAVLLDSRRAPLSCPPLADVLRTLQDKFEERHGGG
CDCSGQDIECLGILRLEGTCFLVNRAVLLSRLGNLVACPEAALSGSTALS
RDSAATVADEARSTSASQFVADRLWPGGGGALGRERGFALLDVRKIVGVP
TVCTDVLIPRLCAALRSMFSGDEIGNLQTPPTADLGGGASPEGPPAKSTR
AWDARADSTTETSGDGRRWLKDWKSKELILGGKDLRKTLGGIGLPGLAGW
LLEYPVIYCCPSLSESEQGKGEAESGDAGNCLAAAPLTVYSLLVEFGQEA
ARNSRDSVSSFEAFSFSVPETAVRCPVDFETPDESTAGGRGGGDPAVVAA
LHGLVENFVERINARVALHSGSGASVGGCQEHRRWLHGLKMSKRTETLNT
VAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027850DUF4504