prot_S-dermatodea_contig8833.16961.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8833.16961.1
Unique Nameprot_S-dermatodea_contig8833.16961.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length92
Homology
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BLAST of mRNA_S-dermatodea_contig8833.16961.1 vs. uniprot
Match: D8LJR5_ECTSI (Elongator complex protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJR5_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.080e-35
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0 
Query:    1 MAPPTAKDEVRHSASPDIESLVYDDAHEKRMPELRQLLDEILPLQKWKEIESRFVAFRKRAKFVPKKNVMYHLYKAQEVRNPALEKALVSK 91
            MAPP   +EVRHSASPDIESLVYD  HE RMP L++LL+EILPL+ WKEIE RF+ FR++ KFVPKKNV+YHLY AQEVRN ALEKALVSK
Sbjct:    1 MAPPQVTEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIEKRFIIFRRKEKFVPKKNVVYHLYMAQEVRNDALEKALVSK 91
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8833.16961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJR5_ECTSI1.080e-3575.82Elongator complex protein 3 n=2 Tax=Ectocarpus Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8833contigS-dermatodea_contig8833:3785..6257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8833.16961.1mRNA_S-dermatodea_contig8833.16961.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8833 3742..6257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8833.16961.1 ID=prot_S-dermatodea_contig8833.16961.1|Name=mRNA_S-dermatodea_contig8833.16961.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=92bp
MAPPTAKDEVRHSASPDIESLVYDDAHEKRMPELRQLLDEILPLQKWKEI
ESRFVAFRKRAKFVPKKNVMYHLYKAQEVRNPALEKALVSKQ
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