mRNA_S-dermatodea_contig8750.16896.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI) HSP 1 Score: 819 bits (2116), Expect = 2.840e-289 Identity = 406/467 (86.94%), Postives = 440/467 (94.22%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVGENDVAETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 1410
++VLRQLSVLAY+ARRLGPVREIPIIMYLVSAMFDTLRNIDEFM+TSMW SCR YI+RV DLL+SRPELTLGQ GNEVVADL+QAGTGV+V E++VA+ LAEVEKTG+LKVVGSLS YM+RLGDEYTKSLQ+INPHTQEYIRRLKDESVVV+LA KVQ YYERQ EM + ADLALLQAEHLYYQHESIARAVHKAQ+FTN++GK EDLHPACTVASA+APS+G LD++ HP AFLGQPSVDH++ADYTEQL+ LCVTVYQHGDDRCRTRAMLCHITHHALHDRF+PARDLLLMSHLQDNISQAD++TQILYNRMMV LGLCAFRKGL++DAHDCLRDVCSSRVKELLAQG+QMNRFQ DK PEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRV+SKHFRRY+DIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG
Sbjct: 359 KEVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLIQAGTGVDVDESEVADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYERQGEMSVVADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKAHPGAFLGQPSVDHEYADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQ-------DKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 818
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA) HSP 1 Score: 566 bits (1460), Expect = 9.190e-190 Identity = 293/469 (62.47%), Postives = 352/469 (75.05%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVG--ENDVAETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 1410
+DVLRQL+ LAYV+RR GP RE+P++M+ V+AMFDTLR+ID++M+T+MW +C + RV LD P+L LG + +ADL A + E D A A + TG +K VG+L++++ RL +EYTKSLQ INPHT EYI RLKDES +V+LAG +QGYY R + A +ALLQ EHLYY+H+SIA AVH++QAFT +G LHPAC T P+ D + HPAA LG P+V+ DY +R LCV +Y+HG DR +TRAMLCHITHHALH RF+ ARDLLLMSHLQDNIS DV TQILYNRMMV LGLCAFR GL+ DAHDCLRDVCSSRVKELLAQGIQ NRFQ +K PEQEKAERRRQ PYHMHINLDLLECCHLT+AML EVP MA+E E+RRR ISK FRR++D F+ QVFTGPPENIRDHVIA AK LM+GDW++C+D+ILG
Sbjct: 368 RDVLRQLAALAYVSRRFGPARELPVLMHTVAAMFDTLRSIDDYMETAMWKNCHATLTRVVGCLDECPDLRLGSMTADDMADLQAALPPKDKATEEEDEASAAAPQQTTGTVKAVGNLATFVQRLEEEYTKSLQKINPHTAEYILRLKDESAIVQLAGAIQGYYVRAGDFDRAATVALLQVEHLYYKHDSIALAVHRSQAFTAVYGSPAMLHPACL---GTGPAATSADYAVVHPAAALGAPTVEVVPMDYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQ-------EKNPEQEKAERRRQMPYHMHINLDLLECCHLTAAMLREVPTMARERGEIRRRHISKLFRRHMDNFDHQVFTGPPENIRDHVIAGAKSLMQGDWRKCADMILG 826
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA) HSP 1 Score: 496 bits (1277), Expect = 1.500e-166 Identity = 261/474 (55.06%), Postives = 329/474 (69.41%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVGENDVAETLAEVEK-------TGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCV-TVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLIL 1407
+++ R LSVLA ARR EIP + +LVS+ FD R++D ++D W SC +++RV ++L+S+ L LG G + +AD++ A G + E AE K +K++G+L +++ RL +EYTK+L +INPHT EY+ RL+ E+ + L Q YYER +MG A +ALL+ EH YY+H+SIA AV KAQ F +WG+ DLHPAC S TA + + T HPAA G+P++D D ++ LC VY+HGDDR RTRAMLCHI HHALHDRFY ARDLLLMSHLQ+NI DV TQIL+NR MV+LGLCAFR GL+ +AH CL D+CSSR KELLAQG+Q R+ DK PEQEKAERRRQTPYHMHINL+LLE CHLT+AMLLEVPNMA E R RVIS+HFR+Y+D F+RQVFTGPPEN+RDHV+ AAK L GDWKRC+DLIL
Sbjct: 110 REINRNLSVLASAARRFSAKIEIPALFHLVSSYFDAQRDMDSYLDFKTWRSCYNHLSRVVNILNSQENLVLGMFGEDDMADMVLAQQGALKDLPEEEEEPAEEAKGDGDGEDENTIKIIGNLVTFVKRLEEEYTKALIAINPHTSEYVTRLRMEAQLTHLCATTQQYYERVGDMGQAAVMALLRIEHTYYKHDSIAEAVFKAQKFAEKWGQYADLHPACL--SPTAALSSEVKPETLHPAAMGGKPAIDAVFEDQAVLIKELCHRVVYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRYS-------DKNPEQEKAERRRQTPYHMHINLELLEGCHLTAAMLLEVPNMATEELSERPRVISRHFRKYMDFFDRQVFTGPPENVRDHVLTAAKSLTTGDWKRCADLIL 574
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA) HSP 1 Score: 489 bits (1258), Expect = 2.590e-160 Identity = 252/467 (53.96%), Postives = 331/467 (70.88%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVGENDVAETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCVTV-YQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLIL 1407
+++++ L++L V ++ GP EIP + +LVS+ FD RN+D+FMD +W +C G++ R++ +L+ PEL L G + +AD++ A G +V E E ++++G+L +++ RL +EYTK+LQ INPHT EY+ RL+ ES +V+L VQ YYER +M A +ALL EH+YY H+SIA AV KAQ F +WG DLHPAC ++S +G D ++ HPA+ G+P++ D ++ C V Y+HGDDR RTRAMLCHI HHA HDRFY ARDLLLMSHLQ++I ADV TQIL+NR MV+LGLCAFR GL+ DAH CL D+CSSRVKELLAQG+Q R+ +K PEQE AERRRQTPYHMHINLDLLE CHLT+AMLLEVPNMA E R RVIS+HFR+++D + RQVFTGPPEN+RDHV+AAAK L G+WK+C++LIL
Sbjct: 328 KELIKNLNMLCQVTKKFGPRCEIPALCHLVSSFFDMQRNMDDFMDLPIWKTCHGHMMRISQILNENPELVLTSIGADDIADMILAQQG---NLEEVKEEPKVDEDANKIQIIGNLVNFVNRLDEEYTKALQKINPHTVEYVVRLRMESQLVKLCTTVQQYYERIEDMKNAASVALLCIEHVYYMHDSIAAAVFKAQKFAEKWGAYSDLHPAC-MSSDAGSEDGKFDAASVHPASIGGKPTITDKLEDVGAFIQEQCHRVIYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRYS-------EKNPEQENAERRRQTPYHMHINLDLLEGCHLTAAMLLEVPNMATEDVSERPRVISRHFRKHMDFYERQVFTGPPENVRDHVLAAAKALTTGEWKKCTELIL 783
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA) HSP 1 Score: 474 bits (1221), Expect = 4.500e-155 Identity = 250/489 (51.12%), Postives = 325/489 (66.46%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVAR-RLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVGE-------------NDVAETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDH-DHADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--------RRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLIL 1407
+D+ + L VLA A+ + G RE+ M+L+++ FD+ R ID++MD W +C G + + +L++ P+ TLG ++ +ADL A + +V +T A ++ G +KVVG+L +Y+ RL DEY KSLQ INPHTQEY+ RL+DE + ELAG +Q YY+R A +ALL+ EH+YY+H+SIA AV AQAF WG +D+H A A+A GV + HP ++LG P+ D D + L+ LC VY HGDDRCRTRA+LCH+ HHALH RF+ ARDLLLMSHLQ+ AD+ TQILYNR MV+LGLCAFR GLV+DAH CL ++CSSRVKELLAQG+Q R+ DK+ EQEKAERRRQTPYHMH+NLDLLECCHLTSAMLLEVP M E R RV S+HFR+++DIF+RQVFTGPPEN RDH++ AAK L GDW+ C+ L++
Sbjct: 312 RDLKQALEVLAKAAQEKFGFHRELQCCMHLIASHFDSNRTIDDYMDVPTWRACHGQLTKACSILEAHPQATLGTVDDDELADLALAAMLAKXXXXXXXXXXXXXXXPKEVIDTEAPPDEAGCVKVVGNLLTYVTRLEDEYVKSLQHINPHTQEYVARLRDERPLEELAGSIQAYYDRSGSTETAATVALLRIEHMYYKHDSIAEAVRDAQAFRAAWGSRDDVHAASRKATA-----GVSTVEKSHPGSWLGAPTTPSTDSCDTAKSLKELCGYVYDHGDDRCRTRALLCHVAHHALHGRFHAARDLLLMSHLQEVAHDADIETQILYNRAMVLLGLCAFRSGLVHDAHSCLAEICSSRVKELLAQGVQSARWS-------DKSDEQEKAERRRQTPYHMHVNLDLLECCHLTSAMLLEVPAMVVEEARNKQLRGAPPRTRVTSRHFRKHMDIFSRQVFTGPPENTRDHILCAAKALALGDWRECARLVV 788
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA) HSP 1 Score: 471 bits (1212), Expect = 3.300e-153 Identity = 251/480 (52.29%), Postives = 325/480 (67.71%), Query Frame = 1
Query: 10 QDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTL-RNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGV---------EVGENDVAETLAEVEKT--GILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHA-DYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 1410
+D+LRQL LAY AR+ GP E+P++ +LVSA FDT R ID++M T+ W + RV +L+ +L L + +ADL+ AG G E GE E AE ++VVG+LS+YM R+ +EY KSLQ INPHTQEYI RLKDE+++V LA KVQ YY R A + L+ EH YY+H+SIA AV +AQ+FT WG LHP C A G LD T HPA+ LG P+ D D +++ + + +Y+HGDDR RTRAMLCHITHHA+HDRF+ ARDLL MSHLQD I DV+TQIL+NR MV+LGLCAFR G++ + H C+ +VCS R KELLAQG+Q +R+ ++ PE+EKAE+RRQ PYHMHINLDLLECCHLT+AMLLEVPN+A + R++VIS+HFR+ DI++RQVFTGPPEN RDHV+A+A+ L EG W++ + L+LG
Sbjct: 356 RDLLRQLQALAYAARKFGPRVELPVLFHLVSAQFDTTSRQIDDYMQTTSWKHVYACLMRVVSVLEGHQDLKLAVVADTDLADLVLAGKGELKVQDKPIDEEGEGQEVEGDAEAATNDPNEIQVVGTLSAYMRRINEEYVKSLQHINPHTQEYIARLKDEALIVALAAKVQAYYVRVGMPTEAASMCLMGLEHTYYKHDSIALAVQRAQSFTALWGDRALLHPGCV---ACTKMEGKLDAETCHPASALGTPTCDFSSLPDMAQEVSDMALFIYRHGDDRLRTRAMLCHITHHAMHDRFHQARDLLFMSHLQDTIGHTDVSTQILFNRAMVLLGLCAFRAGMILEGHYCMTEVCSGRTKELLAQGVQQSRY-------HERNPEKEKAEKRRQMPYHMHINLDLLECCHLTAAMLLEVPNIALDPG--RKKVISRHFRKCRDIYSRQVFTGPPENTRDHVMASAQALEEGQWRQAAKLLLG 823
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A7S4IUV2_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUV2_9STRA) HSP 1 Score: 447 bits (1149), Expect = 1.050e-142 Identity = 261/522 (50.00%), Postives = 329/522 (63.03%), Query Frame = 1
Query: 7 SQDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLL-DSRPELTLGQ-AGNEVVADLL--QAGTG---------------------------VEVGENDVAETLAE---VEKTGILK--------VVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDH---ADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTE--------LRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 1410
++ +LRQL L+ +A R GP E+P++M++V+A FD LR +D+FMD W SC GY+ R+ L D + TLG + +E DLL QA G E GE++ + AE +EK G + V+GSLS ++ RL +EY KSLQ I+PHT EY+ RL+DE+ +VEL GK Q YY R A+LA L+ EHLYY+H++IA V +A F +G+AE LHPAC SA A D S HPAA LG+PSV + D + + LC VY++G DR +TR+MLCHI HHALHDRF ARDLLLMSHLQD IS A DV+T +L+NRMMV +GL AFR G + DAH CL DVCS RV+ELLAQG+ RF DKT EQEKAERRRQTPYHMHIN+DLLE CHLTSAMLLEVPNMAQ R RVIS+ FR++ DI++R VFTGPPE RD+V+ A++ LM GDWK+CS+L+ G
Sbjct: 431 NRSILRQLEGLSRLAVRFGPRFEVPVLMHVVTAQFDLLRTMDDFMDAKTWKSCAGYLWRIASALEDGEEKYTLGHLSADEAADDLLATQAAVGGKMXXXXXXXXXEGAMAAVAADEKLINPETGESETEDERAERIRLEKEGKMTPEELRTIIVIGSLSLHLTRLDEEYIKSLQRISPHTSEYVTRLRDEARLVELLGKAQAYYTRIGSKPEAAELAQLRVEHLYYRHDTIADQVDRAALFHETYGEAELLHPACI--SADADEGKSNDYSKSHPAAALGRPSVATESEAPVDSAQLITDLCTYVYKYGSDRSKTRSMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMLLFNRMMVTMGLAAFRLGRIWDAHQCLGDVCSGRVRELLAQGVSSGRFS-------DKTDEQEKAERRRQTPYHMHINMDLLEACHLTSAMLLEVPNMAQAGAAGGDDTGGPRRARVISRQFRKHHDIYDRSVFTGPPEQTRDYVMVASRALMRGDWKKCSELLGG 943
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN) HSP 1 Score: 440 bits (1131), Expect = 1.150e-142 Identity = 243/470 (51.70%), Postives = 302/470 (64.26%), Query Frame = 1
Query: 7 SQDVLRQLSVLAYVARR-LGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAGTGVEVGENDVAETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--RRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLIL 1407
++++L L LA A+R G RE+ +M+L++A FD R ID++MD + W SC G + RV +L + P E ND + + KVVG+L +++ RL DEY KSLQ INPHT EY+ RL+DE+ + +LA VQ YY R + A +ALL+ EH+YY+HESIA AV AQA+ + HP + +ATA + D G D + +R LC VY HGDDRCRTRA+LCH+ HHALH RFY ARDLLLMSHLQD +DV TQILYNR MV+LGLCAFR GL++DAH CL ++CSSRVKELLAQG+Q RF DK PEQEKAERRRQTPYHMHINLDLLECCHLT+AMLLEVPNM+ E+ +R IS+HFR+++DIFNRQVFTGPPEN RDHV+ AAK L GDWK C+DL+L
Sbjct: 266 ARELLAALEALAGKAKRSFGYARELGALMHLIAAQFDANRTIDDYMDVATWRSCHGQLGRVVAVLSAHP------GKGEDXXXXXXXXXXXXXAPNDDPDAV---------KVVGNLLTFLARLEDEYVKSLQRINPHTHEYVSRLRDEAPLTDLAAGVQAYYVRVGDDKAAATVALLRVEHMYYKHESIASAVRDAQAYRANERDSSKSHPGAWLGAATAAATAPDDEVVG----------------DASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARFS-------DKNPEQEKAERRRQTPYHMHINLDLLECCHLTAAMLLEVPNMSVEAGGAGGHKRPISRHFRKHLDIFNRQVFTGPPENTRDHVLCAAKALGVGDWKTCADLVL 697
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA) HSP 1 Score: 441 bits (1134), Expect = 2.160e-141 Identity = 256/517 (49.52%), Postives = 325/517 (62.86%), Query Frame = 1
Query: 16 VLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPE-------LTLGQAGNEVVADLLQAGTGV------------------------EVGENDVAETLAE-----------VEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSV-DHDHADYTEQLRV---LCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCSSRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQES-----TELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILG 1410
VLRQL L+ +A R GP E+P ++++++A FD +R +D++M+T W SC Y+ RV ++LD E L AG + +L G G GE + A+ AE E+ ++V GSL+ ++ RL +EY KSLQ I+PHT EY+ RL+DE+ +V+L K Q YYER A+LA L+ EHLYY+H+SIA V +A F ++G+A LHPAC + T G +D S HPAA G+PSV D D A+ + ++ LC VYQHG DR RTRAMLCHI HHALHDRF ARDLLLMSHLQD IS A DV+T IL+NRMMV LGL AFR G + DAH CL DVCS RV+ELLAQG+ RF DK+ EQEKAE+RRQ PYH HINLDLLE CHLTSAMLLEVPNMA + + R RVIS+ FR+ DI++RQVFTGPPE RD+V+ AAK LM+GDWK+CS+L++G
Sbjct: 358 VLRQLEGLSRLAARFGPRSEVPALIFVITAQFDLVRTLDDYMETKTWRSCAEYLGRVANILDGGEEKYKLDLPLPDEDAGGLMGGVVLPEGAGKMKAAAKAGGGAMAAVAADEKLINPHTGETETADERAERIRIETEEKMSPEELHTIRVPGSLALFLTRLDEEYNKSLQKISPHTIEYVARLRDEARLVDLQMKFQAYYERIGSTAEAAELAQLRVEHLYYRHDSIATQVDRASKFYERFGEASMLHPACVSDNDT---RGSVDYSKVHPAASCGKPSVEDTDAAESVDSAKLIADLCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFS-------DKSAEQEKAEKRRQIPYHQHINLDLLEACHLTSAMLLEVPNMAASAEGDAGSSRRTRVISRTFRKNHDIYDRQVFTGPPEQTRDYVMRAAKALMKGDWKKCSNLLVG 864
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Match: K3WGH6_GLOUD (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGH6_GLOUD) HSP 1 Score: 434 bits (1115), Expect = 1.980e-139 Identity = 237/479 (49.48%), Postives = 319/479 (66.60%), Query Frame = 1
Query: 1 QKSQDVLRQLSVLAYV---ARRLGPVREIPIIMYLVSA-MFDTLRNIDEFMDTSMWHSCRGYINRVTDLLDSRPELTLGQAGNEVVADLLQAG---TGVEVGENDVA--ETLAEVEKTGILKVVGSLSSYMMRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQGYYERQAEMGITADLALLQAEHLYYQHESIARAVHKAQAFTNQWGKAEDLHPACTVASATAPSNGVLDISTGHPAAFLGQPSVDHDHADYTEQLRVLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADVATQILYNRMMVILGLCAFRKGLVNDAHDCLRDVCS-SRVKELLAQGIQMNRFQARARLLFDKTPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRYVDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLIL 1407
+K ++ QLS+L + ARRLGP R++ MYL+ MFD+ ID M W S + + +L+ P +L +E AD+LQAG ++ E+D A +TL + + G +KV G L++++ RL DEYTK+LQ +PHT EYI RL DES+++E A +VQ YYE + + + +AL++AE +YY+HESIA A+H++ A +G LHPAC ++A D+S+ HPA+ LGQP+VD D ++LR +C+ V++H D R +TRAMLC I HHALHDRF+ ARDLLLMSH+QDNI+ AD+ATQIL+NRMM LGL AFR GL+ +AH CL ++C+ SR KELLAQG+Q RFQ R EQE+ ERRRQ PYHMHINLDLLE CHL SAMLLEVPNM R+R++SK FR+ ++ R VF GPPEN RDHV+AAAK L +G WK+ ++L+L
Sbjct: 312 KKGTELSEQLSILRKLSNYARRLGPARQLVATMYLLGTQMFDSSSKIDRVMSARQWKSAHSDLTTILKILEKNPGFSLAPLTSEDQADILQAGRDAAALDKEEDDSAYMDTLPKAGEKGKIKVSGDLAAFIERLSDEYTKALQQTDPHTSEYIGRLFDESLLIEAAHRVQNYYEHKNDTNRASTVALIRAELIYYKHESIANALHESHAKRAVYGDPVHLHPACNGSAAKKVPIASFDVSSVHPASILGQPTVDVPALDTEKELREVCMFVFKHADIRAKTRAMLCRIYHHALHDRFHEARDLLLMSHIQDNITDADIATQILFNRMMAQLGLAAFRSGLIWEAHACLSEICTGSRTKELLAQGMQSFRFQER-------DLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRVSERKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWKKSTELLL 783 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8750.16896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8750.16896.1 >prot_S-dermatodea_contig8750.16896.1 ID=prot_S-dermatodea_contig8750.16896.1|Name=mRNA_S-dermatodea_contig8750.16896.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=471bp QKSQDVLRQLSVLAYVARRLGPVREIPIIMYLVSAMFDTLRNIDEFMDTSback to top mRNA from alignment at S-dermatodea_contig8750:501..5342+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8750.16896.1 ID=mRNA_S-dermatodea_contig8750.16896.1|Name=mRNA_S-dermatodea_contig8750.16896.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4842bp|location=Sequence derived from alignment at S-dermatodea_contig8750:501..5342+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8750:501..5342+ >mRNA_S-dermatodea_contig8750.16896.1 ID=mRNA_S-dermatodea_contig8750.16896.1|Name=mRNA_S-dermatodea_contig8750.16896.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2826bp|location=Sequence derived from alignment at S-dermatodea_contig8750:501..5342+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |