mRNA_S-dermatodea_contig875.16892.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: D7FLB9_ECTSI (Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLB9_ECTSI) HSP 1 Score: 356 bits (914), Expect = 2.340e-118 Identity = 171/192 (89.06%), Postives = 185/192 (96.35%), Query Frame = 1
Query: 1 RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF-KHGGGG 573
++VYFDW+APRSREGYFK++GGVDYCIARGRAYA HADLLWMETAKPN+ EA+AFA GIHA VPHQKLAYNLSPSFNWDAAGMSK+EMAAFNRELGRLGFVWQFITLAGFHSDGL+VSRLAKEYGKHGVIKYVELVQRPER EQVD+LTHQ+WSGANLMDKQVN ATGGL+ST+AMGEGVTESQF +HGGGG
Sbjct: 372 KQVYFDWDAPRSREGYFKLKGGVDYCIARGRAYAQHADLLWMETAKPNLPEARAFAEGIHAAVPHQKLAYNLSPSFNWDAAGMSKQEMAAFNRELGRLGFVWQFITLAGFHSDGLIVSRLAKEYGKHGVIKYVELVQRPERNEQVDILTHQKWSGANLMDKQVNIATGGLASTSAMGEGVTESQFVRHGGGG 563
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A835YPK9_9STRA (Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK9_9STRA) HSP 1 Score: 302 bits (774), Expect = 1.100e-97 Identity = 137/183 (74.86%), Postives = 167/183 (91.26%), Query Frame = 1
Query: 10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQFK 558
+FDWEAPRSREGY+K+RGGVDYC+AR RA+APHADLLWMETAKP + EA+ FA G+H P Q LAYNLSPSFNWD+AGM++ +MA+FNR+LG+LG+V+QFITLAGFH+DGL+ +RL++EYG+HG+IKYV+LVQR ER EQVDLLTHQRWSGA+LMD+QV ATGG+SST+AMGEGVTE+QFK
Sbjct: 368 HFDWEAPRSREGYYKVRGGVDYCVARARAFAPHADLLWMETAKPILEEARQFAHGVHEAFPRQMLAYNLSPSFNWDSAGMTEAQMASFNRDLGQLGYVFQFITLAGFHADGLITARLSREYGQHGIIKYVDLVQRQERAEQVDLLTHQRWSGADLMDRQVRLATGGISSTSAMGEGVTEAQFK 550
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: W7TRS4_9STRA (Isocitrate lyase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRS4_9STRA) HSP 1 Score: 285 bits (728), Expect = 3.180e-90 Identity = 127/185 (68.65%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 1 RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
R+VYFDWEAPRSREGY++I+GGVDYC+AR AYAPHADL+WMETAKP++ EA+ FA G+ A VP + LAYNLSPSFNWD AG+S +EM FN L +GFVWQFITLAGFH++GLM + A+EYGK GV+ YVE++QR ERE++VD+LTHQ+WSGA L+DKQ+ T TGG+SST++MG+GVTE+QF
Sbjct: 398 REVYFDWEAPRSREGYYRIKGGVDYCVARAVAYAPHADLIWMETAKPDLSEAREFAQGVRAAVPGKMLAYNLSPSFNWDVAGLSPQEMEHFNSSLAAMGFVWQFITLAGFHANGLMTTMFAREYGKRGVVAYVEMIQRKEREQEVDMLTHQKWSGAALLDKQMQTVTGGMSSTSSMGKGVTEAQF 582
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9U2Z1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Z1_9STRA) HSP 1 Score: 259 bits (662), Expect = 4.670e-82 Identity = 120/182 (65.93%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
YFDWEAPRSREGY++++GGVD C+ARG A+AP+ DLLWMET KP +R+A+ F+TGI PHQ LAYNLSPSFNWDAAGM++ E+A FN LGRLG+VWQFITLAGFH++GL S LAK Y + GV YV ++QR ERE + LLTHQ+WSGA +D+++ T TGGL ST AMG GVTE+QF
Sbjct: 260 YFDWEAPRSREGYYRVKGGVDMCVARGIAFAPYCDLLWMETKKPIMRDAEEFSTGIKKVHPHQFLAYNLSPSFNWDAAGMTEAELADFNNALGRLGYVWQFITLAGFHANGLAASELAKAYAEQGVAAYVRMIQRRERELGLPLLTHQKWSGAEYIDRKMTTVTGGLGSTNAMGAGVTETQF 441
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9U2N8_9STRA (Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2N8_9STRA) HSP 1 Score: 259 bits (662), Expect = 9.430e-81 Identity = 120/182 (65.93%), Postives = 147/182 (80.77%), Query Frame = 1
Query: 10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
YFDWEAPRSREGY++++GGVD C+ARG A+AP+ DLLWMET KP +R+A+ F+TGI PHQ LAYNLSPSFNWDAAGM++ E+A FN LGRLG+VWQFITLAGFH++GL S LAK Y + GV YV ++QR ERE + LLTHQ+WSGA +D+++ T TGGL ST AMG GVTE+QF
Sbjct: 377 YFDWEAPRSREGYYRVKGGVDMCVARGIAFAPYCDLLWMETKKPIMRDAEEFSTGIKKVHPHQFLAYNLSPSFNWDAAGMTEAELADFNNALGRLGYVWQFITLAGFHANGLAASELAKAYAEQGVAAYVRMIQRRERELGLPLLTHQKWSGAEYIDRKMTTVTGGLGSTNAMGAGVTETQF 558
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S2ETJ0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ETJ0_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.030e-80 Identity = 111/183 (60.66%), Postives = 150/183 (81.97%), Query Frame = 1
Query: 7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
VYFDWE R REGY++++ G+DYCI R AY+P+ADL+WMET P++ +A+ FA G+ + PHQ L+YNLSPSFNWDA+GM+ ++++FN +LG+LG+VWQFITLAGFHS+G++ + LA+ YGK G++ YV +QR ERE +V+LLTHQRWSGA L+D+ V+ A+GG SSTAAMG+GVTE QF
Sbjct: 134 VYFDWELCRVREGYYRLKPGIDYCIQRAIAYSPYADLIWMETKIPSLTDAEKFARGVKSIYPHQMLSYNLSPSFNWDASGMTDTQLSSFNDDLGKLGYVWQFITLAGFHSNGMITTELARSYGKEGILAYVRDIQRREREGKVELLTHQRWSGAELVDRMVSVASGGQSSTAAMGDGVTEKQF 316
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: K0R325_THAOC (Isocitrate lyase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R325_THAOC) HSP 1 Score: 247 bits (630), Expect = 4.510e-80 Identity = 119/209 (56.94%), Postives = 152/209 (72.73%), Query Frame = 1
Query: 7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNL-----------------------SPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF-KH 561
VYFDWEA R REGY++I+ GV+YCI R RAYAPH+DL+WMET KP I A+ F+ G+ A PHQ LAYNL SPSFNWDA+GMS ++A FN +LG+LG+VWQFITLAGFHS+GL++++LA+ +G G++ YV +QR E+ ++V+LL HQ+WSGA L+D+ VN A+GG SSTAAMG GVTESQF KH
Sbjct: 29 VYFDWEACRVREGYYRIKPGVEYCIQRARAYAPHSDLIWMETGKPGIPVARKFSQGVKAVFPHQMLAYNLRCVKIVCCFHLLIYQHNDIYICLSPSFNWDASGMSDEQLAKFNDDLGKLGYVWQFITLAGFHSNGLIITKLARSFGDEGMLAYVRDIQRQEKVQEVELLKHQKWSGAELVDRMVNVASGGQSSTAAMGAGVTESQFGKH 237
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9WX52_9STRA (Isocitrate lyase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX52_9STRA) HSP 1 Score: 257 bits (657), Expect = 5.250e-80 Identity = 115/183 (62.84%), Postives = 149/183 (81.42%), Query Frame = 1
Query: 7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
VYFDWE R REGY++ + G+DYCI R +AYAP+ D++WMET P I +A+ FA G+H+ PHQ LAYNLSPSFNWDA+GMS ++A FN LG+LG+ WQFITLAGFHS+GL+V++LA+E+G G++ YVE +QR ER+ +V+LLTHQ+WSGA L+D+ VN A+GG SSTAAMG GVTE+QF
Sbjct: 386 VYFDWELCRVREGYYQTKPGIDYCIKRAQAYAPYCDIIWMETKVPGIADAQKFAHGVHSKWPHQMLAYNLSPSFNWDASGMSDGQLATFNDALGKLGYTWQFITLAGFHSNGLVVTKLAREFGDRGMLAYVETIQRQERKHKVELLTHQKWSGAELVDRMVNVASGGTSSTAAMGSGVTEAQF 568
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S3XN19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN19_HETAK) HSP 1 Score: 249 bits (636), Expect = 5.740e-80 Identity = 113/181 (62.43%), Postives = 143/181 (79.01%), Query Frame = 1
Query: 13 FDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
FDWEAPR+REG+++++GG+DY IAR A++P+ D+LWMET +P+I E + FA G+HA P + LAYNLSPSFNWDA G+S E+A FN +LGRLG VWQFITLAGFH+DGL + LA+ Y + G+ YVE+VQR ER+ QV+LLTHQ+WSGA L+D Q+ TATG L STAAMG TE QF
Sbjct: 75 FDWEAPRTREGFYRVKGGIDYSIARAIAFSPYCDMLWMETHRPHIGEMREFAAGVHAVYPGKMLAYNLSPSFNWDAHGLSAAELARFNADLGRLGVVWQFITLAGFHADGLAATTLARAYAQRGIAAYVEMVQREERKHQVELLTHQKWSGATLVDNQIQTATGALQSTAAMGAANTERQF 255
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S2L2F9_9STRA (Isocitrate lyase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L2F9_9STRA) HSP 1 Score: 257 bits (656), Expect = 6.890e-80 Identity = 117/187 (62.57%), Postives = 149/187 (79.68%), Query Frame = 1
Query: 7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQFKHGG 567
+YFDW+A R REGY++++ G+DYCI R RAYAP+ADL+WMET P+I +A F+ G+ + PHQ LAYNLSPSFNWDA+GM+ E+A FN +LGRLGF WQFITLAGFHS+GL+V++LA+ YG G++ YV +QR ER+E V+LL HQ+WSGA L+D V A+GG+SSTAAMG GVTESQF G
Sbjct: 379 IYFDWDACRVREGYYRLKAGIDYCIQRARAYAPYADLIWMETKIPHIPDAAKFSRGVKSMFPHQMLAYNLSPSFNWDASGMTDGELARFNDDLGRLGFAWQFITLAGFHSNGLVVTKLARSYGDEGMLAYVRDIQRKERDEHVELLKHQKWSGAELVDTMVTVASGGVSSTAAMGAGVTESQFSSSG 565 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig875.16892.1 >prot_S-dermatodea_contig875.16892.1 ID=prot_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIRback to top mRNA from alignment at S-dermatodea_contig875:20..1991+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig875.16892.1 ID=mRNA_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at S-dermatodea_contig875:20..1991+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig875:20..1991+ >mRNA_S-dermatodea_contig875.16892.1 ID=mRNA_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at S-dermatodea_contig875:20..1991+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |