mRNA_S-dermatodea_contig875.16892.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig875.16892.1
Unique NamemRNA_S-dermatodea_contig875.16892.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: D7FLB9_ECTSI (Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLB9_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.340e-118
Identity = 171/192 (89.06%), Postives = 185/192 (96.35%), Query Frame = 1
Query:    1 RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF-KHGGGG 573
            ++VYFDW+APRSREGYFK++GGVDYCIARGRAYA HADLLWMETAKPN+ EA+AFA GIHA VPHQKLAYNLSPSFNWDAAGMSK+EMAAFNRELGRLGFVWQFITLAGFHSDGL+VSRLAKEYGKHGVIKYVELVQRPER EQVD+LTHQ+WSGANLMDKQVN ATGGL+ST+AMGEGVTESQF +HGGGG
Sbjct:  372 KQVYFDWDAPRSREGYFKLKGGVDYCIARGRAYAQHADLLWMETAKPNLPEARAFAEGIHAAVPHQKLAYNLSPSFNWDAAGMSKQEMAAFNRELGRLGFVWQFITLAGFHSDGLIVSRLAKEYGKHGVIKYVELVQRPERNEQVDILTHQKWSGANLMDKQVNIATGGLASTSAMGEGVTESQFVRHGGGG 563          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A835YPK9_9STRA (Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK9_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.100e-97
Identity = 137/183 (74.86%), Postives = 167/183 (91.26%), Query Frame = 1
Query:   10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQFK 558
            +FDWEAPRSREGY+K+RGGVDYC+AR RA+APHADLLWMETAKP + EA+ FA G+H   P Q LAYNLSPSFNWD+AGM++ +MA+FNR+LG+LG+V+QFITLAGFH+DGL+ +RL++EYG+HG+IKYV+LVQR ER EQVDLLTHQRWSGA+LMD+QV  ATGG+SST+AMGEGVTE+QFK
Sbjct:  368 HFDWEAPRSREGYYKVRGGVDYCVARARAFAPHADLLWMETAKPILEEARQFAHGVHEAFPRQMLAYNLSPSFNWDSAGMTEAQMASFNRDLGQLGYVFQFITLAGFHADGLITARLSREYGQHGIIKYVDLVQRQERAEQVDLLTHQRWSGADLMDRQVRLATGGISSTSAMGEGVTEAQFK 550          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: W7TRS4_9STRA (Isocitrate lyase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRS4_9STRA)

HSP 1 Score: 285 bits (728), Expect = 3.180e-90
Identity = 127/185 (68.65%), Postives = 159/185 (85.95%), Query Frame = 1
Query:    1 RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            R+VYFDWEAPRSREGY++I+GGVDYC+AR  AYAPHADL+WMETAKP++ EA+ FA G+ A VP + LAYNLSPSFNWD AG+S +EM  FN  L  +GFVWQFITLAGFH++GLM +  A+EYGK GV+ YVE++QR ERE++VD+LTHQ+WSGA L+DKQ+ T TGG+SST++MG+GVTE+QF
Sbjct:  398 REVYFDWEAPRSREGYYRIKGGVDYCVARAVAYAPHADLIWMETAKPDLSEAREFAQGVRAAVPGKMLAYNLSPSFNWDVAGLSPQEMEHFNSSLAAMGFVWQFITLAGFHANGLMTTMFAREYGKRGVVAYVEMIQRKEREQEVDMLTHQKWSGAALLDKQMQTVTGGMSSTSSMGKGVTEAQF 582          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9U2Z1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Z1_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.670e-82
Identity = 120/182 (65.93%), Postives = 147/182 (80.77%), Query Frame = 1
Query:   10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            YFDWEAPRSREGY++++GGVD C+ARG A+AP+ DLLWMET KP +R+A+ F+TGI    PHQ LAYNLSPSFNWDAAGM++ E+A FN  LGRLG+VWQFITLAGFH++GL  S LAK Y + GV  YV ++QR ERE  + LLTHQ+WSGA  +D+++ T TGGL ST AMG GVTE+QF
Sbjct:  260 YFDWEAPRSREGYYRVKGGVDMCVARGIAFAPYCDLLWMETKKPIMRDAEEFSTGIKKVHPHQFLAYNLSPSFNWDAAGMTEAELADFNNALGRLGYVWQFITLAGFHANGLAASELAKAYAEQGVAAYVRMIQRRERELGLPLLTHQKWSGAEYIDRKMTTVTGGLGSTNAMGAGVTETQF 441          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9U2N8_9STRA (Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2N8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 9.430e-81
Identity = 120/182 (65.93%), Postives = 147/182 (80.77%), Query Frame = 1
Query:   10 YFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            YFDWEAPRSREGY++++GGVD C+ARG A+AP+ DLLWMET KP +R+A+ F+TGI    PHQ LAYNLSPSFNWDAAGM++ E+A FN  LGRLG+VWQFITLAGFH++GL  S LAK Y + GV  YV ++QR ERE  + LLTHQ+WSGA  +D+++ T TGGL ST AMG GVTE+QF
Sbjct:  377 YFDWEAPRSREGYYRVKGGVDMCVARGIAFAPYCDLLWMETKKPIMRDAEEFSTGIKKVHPHQFLAYNLSPSFNWDAAGMTEAELADFNNALGRLGYVWQFITLAGFHANGLAASELAKAYAEQGVAAYVRMIQRRERELGLPLLTHQKWSGAEYIDRKMTTVTGGLGSTNAMGAGVTETQF 558          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S2ETJ0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ETJ0_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.030e-80
Identity = 111/183 (60.66%), Postives = 150/183 (81.97%), Query Frame = 1
Query:    7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            VYFDWE  R REGY++++ G+DYCI R  AY+P+ADL+WMET  P++ +A+ FA G+ +  PHQ L+YNLSPSFNWDA+GM+  ++++FN +LG+LG+VWQFITLAGFHS+G++ + LA+ YGK G++ YV  +QR ERE +V+LLTHQRWSGA L+D+ V+ A+GG SSTAAMG+GVTE QF
Sbjct:  134 VYFDWELCRVREGYYRLKPGIDYCIQRAIAYSPYADLIWMETKIPSLTDAEKFARGVKSIYPHQMLSYNLSPSFNWDASGMTDTQLSSFNDDLGKLGYVWQFITLAGFHSNGMITTELARSYGKEGILAYVRDIQRREREGKVELLTHQRWSGAELVDRMVSVASGGQSSTAAMGDGVTEKQF 316          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: K0R325_THAOC (Isocitrate lyase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R325_THAOC)

HSP 1 Score: 247 bits (630), Expect = 4.510e-80
Identity = 119/209 (56.94%), Postives = 152/209 (72.73%), Query Frame = 1
Query:    7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNL-----------------------SPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF-KH 561
            VYFDWEA R REGY++I+ GV+YCI R RAYAPH+DL+WMET KP I  A+ F+ G+ A  PHQ LAYNL                       SPSFNWDA+GMS  ++A FN +LG+LG+VWQFITLAGFHS+GL++++LA+ +G  G++ YV  +QR E+ ++V+LL HQ+WSGA L+D+ VN A+GG SSTAAMG GVTESQF KH
Sbjct:   29 VYFDWEACRVREGYYRIKPGVEYCIQRARAYAPHSDLIWMETGKPGIPVARKFSQGVKAVFPHQMLAYNLRCVKIVCCFHLLIYQHNDIYICLSPSFNWDASGMSDEQLAKFNDDLGKLGYVWQFITLAGFHSNGLIITKLARSFGDEGMLAYVRDIQRQEKVQEVELLKHQKWSGAELVDRMVNVASGGQSSTAAMGAGVTESQFGKH 237          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7R9WX52_9STRA (Isocitrate lyase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX52_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.250e-80
Identity = 115/183 (62.84%), Postives = 149/183 (81.42%), Query Frame = 1
Query:    7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            VYFDWE  R REGY++ + G+DYCI R +AYAP+ D++WMET  P I +A+ FA G+H+  PHQ LAYNLSPSFNWDA+GMS  ++A FN  LG+LG+ WQFITLAGFHS+GL+V++LA+E+G  G++ YVE +QR ER+ +V+LLTHQ+WSGA L+D+ VN A+GG SSTAAMG GVTE+QF
Sbjct:  386 VYFDWELCRVREGYYQTKPGIDYCIKRAQAYAPYCDIIWMETKVPGIADAQKFAHGVHSKWPHQMLAYNLSPSFNWDASGMSDGQLATFNDALGKLGYTWQFITLAGFHSNGLVVTKLAREFGDRGMLAYVETIQRQERKHKVELLTHQKWSGAELVDRMVNVASGGTSSTAAMGSGVTEAQF 568          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S3XN19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN19_HETAK)

HSP 1 Score: 249 bits (636), Expect = 5.740e-80
Identity = 113/181 (62.43%), Postives = 143/181 (79.01%), Query Frame = 1
Query:   13 FDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQF 555
            FDWEAPR+REG+++++GG+DY IAR  A++P+ D+LWMET +P+I E + FA G+HA  P + LAYNLSPSFNWDA G+S  E+A FN +LGRLG VWQFITLAGFH+DGL  + LA+ Y + G+  YVE+VQR ER+ QV+LLTHQ+WSGA L+D Q+ TATG L STAAMG   TE QF
Sbjct:   75 FDWEAPRTREGFYRVKGGIDYSIARAIAFSPYCDMLWMETHRPHIGEMREFAAGVHAVYPGKMLAYNLSPSFNWDAHGLSAAELARFNADLGRLGVVWQFITLAGFHADGLAATTLARAYAQRGIAAYVEMVQREERKHQVELLTHQKWSGATLVDNQIQTATGALQSTAAMGAANTERQF 255          
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Match: A0A7S2L2F9_9STRA (Isocitrate lyase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L2F9_9STRA)

HSP 1 Score: 257 bits (656), Expect = 6.890e-80
Identity = 117/187 (62.57%), Postives = 149/187 (79.68%), Query Frame = 1
Query:    7 VYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIREAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGFVWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTHQRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQFKHGG 567
            +YFDW+A R REGY++++ G+DYCI R RAYAP+ADL+WMET  P+I +A  F+ G+ +  PHQ LAYNLSPSFNWDA+GM+  E+A FN +LGRLGF WQFITLAGFHS+GL+V++LA+ YG  G++ YV  +QR ER+E V+LL HQ+WSGA L+D  V  A+GG+SSTAAMG GVTESQF   G
Sbjct:  379 IYFDWDACRVREGYYRLKAGIDYCIQRARAYAPYADLIWMETKIPHIPDAAKFSRGVKSMFPHQMLAYNLSPSFNWDASGMTDGELARFNDDLGRLGFAWQFITLAGFHSNGLVVTKLARSYGDEGMLAYVRDIQRKERDEHVELLKHQKWSGAELVDTMVTVASGGVSSTAAMGAGVTESQFSSSG 565          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig875.16892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB9_ECTSI2.340e-11889.06Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835YPK9_9STRA1.100e-9774.86Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303... [more]
W7TRS4_9STRA3.180e-9068.65Isocitrate lyase n=2 Tax=Monodopsidaceae TaxID=425... [more]
A0A7R9U2Z1_9STRA4.670e-8265.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9U2N8_9STRA9.430e-8165.93Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosu... [more]
A0A7S2ETJ0_9STRA1.030e-8060.66Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0R325_THAOC4.510e-8056.94Isocitrate lyase n=1 Tax=Thalassiosira oceanica Ta... [more]
A0A7R9WX52_9STRA5.250e-8062.84Isocitrate lyase n=1 Tax=Craspedostauros australis... [more]
A0A7S3XN19_HETAK5.740e-8062.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2L2F9_9STRA6.890e-8062.57Isocitrate lyase n=1 Tax=Leptocylindrus danicus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig875contigS-dermatodea_contig875:20..1991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue8.1e-97
Seed eggNOG ortholog2880.D7FLB9
Preferred nameICL1
KEGG rclassRC00311,RC00313
KEGG koko:K01637
KEGG ReactionR00479
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
GOsGO:0003674,GO:0003824,GO:0004451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005975,GO:0006081,GO:0006082,GO:0006083,GO:0006097,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009514,GO:0009987,GO:0015976,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031907,GO:0031974,GO:0032787,GO:0042579,GO:0042737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046395,GO:0046421,GO:0046459,GO:0046487,GO:0070013,GO:0071704,GO:0072329,GO:1901575
EggNOG free text desc.isocitrate lyase activity
EggNOG OGsCOG2513@1,KOG1260@2759
EC4.1.3.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size578
Cds size576
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig875.16892.1prot_S-dermatodea_contig875.16892.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig875 20..1989 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925363.7725837-CDS-S-dermatodea_contig875:19..1051622925363.7725837-CDS-S-dermatodea_contig875:19..105Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 20..105 +
1694079882.9368308-CDS-S-dermatodea_contig875:19..1051694079882.9368308-CDS-S-dermatodea_contig875:19..105Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 20..105 +
1622925363.7862282-CDS-S-dermatodea_contig875:470..6931622925363.7862282-CDS-S-dermatodea_contig875:470..693Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 471..693 +
1694079882.9513156-CDS-S-dermatodea_contig875:470..6931694079882.9513156-CDS-S-dermatodea_contig875:470..693Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 471..693 +
1622925363.8004477-CDS-S-dermatodea_contig875:858..9261622925363.8004477-CDS-S-dermatodea_contig875:858..926Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 859..926 +
1694079882.9619548-CDS-S-dermatodea_contig875:858..9261694079882.9619548-CDS-S-dermatodea_contig875:858..926Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 859..926 +
1622925363.8110087-CDS-S-dermatodea_contig875:1397..15061622925363.8110087-CDS-S-dermatodea_contig875:1397..1506Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 1398..1506 +
1694079882.9800954-CDS-S-dermatodea_contig875:1397..15061694079882.9800954-CDS-S-dermatodea_contig875:1397..1506Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 1398..1506 +
1622925363.820353-CDS-S-dermatodea_contig875:1899..19891622925363.820353-CDS-S-dermatodea_contig875:1899..1989Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 1900..1989 +
1694079882.9921722-CDS-S-dermatodea_contig875:1899..19891694079882.9921722-CDS-S-dermatodea_contig875:1899..1989Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig875 1900..1989 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig875.16892.1

>prot_S-dermatodea_contig875.16892.1 ID=prot_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
RKVYFDWEAPRSREGYFKIRGGVDYCIARGRAYAPHADLLWMETAKPNIR
EAKAFATGIHATVPHQKLAYNLSPSFNWDAAGMSKREMAAFNRELGRLGF
VWQFITLAGFHSDGLMVSRLAKEYGKHGVIKYVELVQRPEREEQVDLLTH
QRWSGANLMDKQVNTATGGLSSTAAMGEGVTESQFKHGGGGG
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mRNA from alignment at S-dermatodea_contig875:20..1991+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig875.16892.1 ID=mRNA_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at S-dermatodea_contig875:20..1991+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGTAAGGTGTACTTCGACTGGGAGGCTCCCCGCAGCCGGGAGGGCTACTT CAAGATCCGCGGTGGTGTAGACTACTGCATCGCCAGGTTAGTCGGCCTAG TCGGTTTCATCGACGCAACGAAAGCACACGCGCTTGACGATGCACCTTAA GGGCGCAAGAAGCGGCTGTTATCCTGCGTTGAGAACGAGTGTTTTTGCCA CTTTGCACCTTTCGTGTAGGTATTTTAAAATAGCATCGAAGCCCGGCAAC ACGGCTATGTACGGCGTGACACTCCCGGCGGACACAGAGTACCCTATTTG TCGAGTGAACACTTCCGATGCGTTCGGAGTCACGTGGCCAATGGTTTAGG TCCGAGGGAAAATCAAGCGCTAGTTTGCTTCCCCACCTCACCCAGCGCCC ACGTCTTTCAATCCCCTCTCCACCGCCATTTGGCGTTTTTATCGCGCGTA GGGGTCGTGCCTACGCGCCTCATGCCGACCTCCTGTGGATGGAGACAGCC AAGCCCAACATCCGCGAGGCGAAGGCCTTTGCTACCGGCATCCACGCTAC CGTCCCGCACCAGAAGCTTGCCTACAACCTCTCCCCCAGCTTCAACTGGG ACGCGGCTGGCATGTCGAAGCGAGAGATGGCCGCGTTTAACAGGGAGCTT GGCCGCCTCGGGTTTGTCTGGCAGGTAAATGGCGTATTCGTTCCGATAGC AAGTAGTAAAAGAGGTCTATATTCCGGCAGGTCACCCGAGCCCTCCCTCC TGTCATTGCCTCGAATTGTTCAGCCCCAGCCCATGCCCCCCCCCCTCCCC TCTCCCCCTCCCCTCCGCGCCTCCCGCCACGCGGGACAGTTCATCACCCT GGCAGGCTTTCACTCTGACGGTCTCATGGTGTCCCGCCTCGCCAAAGAGT ACGGAAAGTGAGTTATCGGTACCGTATCCGCACCTCACCCCTGTAGCCAG CTTTACCATAGCACAGGATGTACAGCGCATATCGAGGGGTGGGAATACTA ATACTTGCTGCAAGTACTAATACTTGCTGCAAGCGTCAAGGTGTAAGAAA GGTTTGTTACTGGTTGCTTCGGGGCGAATCCCTAGGTTCTCACGTACTCG AATCCTCCGGAAGAGGAAGCCCCTCGAAACAGTTGTCAAGAGGCCCACCT AATTTCTGACGTGCTAAAATGATAAACGTTGGCGACCTTGTACTCATAGT ACCAGGGTGCAAGTTCTGATATATCGTGATGGAAGCATCTGTTGAGACTA TCCCAACACAAAACTACCAGTAGACTCGTTGCCTTTCTCCACTGCAATAT GCAAACGAATTAATCTGACTCCGGCATCGACAAACCACGAATTGGACACG TGCCCGTTTCTCGATGCGCAATTCGTAGGCACGGTGTCATCAAATACGTG GAGCTCGTGCAGAGACCCGAGCGGGAAGAGCAGGTGGACCTTCTAACGCA CCAGAGGTGGTCTGGCGCCAATCTCATGGACAAGCAGGTACCGACCGTTC GCCTGGAGAAATGGCTTGCCTTGCCTATGCACCTCAATTACTCTCCCGAT GGGCCGCAGGCATCCTTAGGCTTTGTTAGTGTTATTTTTCCTGATTGCGT GATAGGCGGTCATGTTCTGGGGAGACAATGGACAATGGGGAGCTAGCTTT GCTTAACGTACGAACTTCGGTTGCTCGTGGAATGTACATCACCAGGATCA CCTACCTACCGTGTGTGACACAAGTACCGACGGTGAACGCTGTGGGTTCA CAGGAAACGCTAGCCTTTGCCTGCCACAGTCAGTATGTAGTATATAGTTA CGATAAAACCTGGTGAAAACACTCGACGCCAGTGATGCCACATATATCAG TTCAGTTTTGTGCGCACGCCACTGGAACAGGTCAACACGGCCACAGGAGG GCTTTCGTCCACTGCTGCTATGGGAGAAGGAGTCACCGAGTCTCAATTCA AGCACGGCGGTGGCGGGGGCGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig875:20..1991+

>mRNA_S-dermatodea_contig875.16892.1 ID=mRNA_S-dermatodea_contig875.16892.1|Name=mRNA_S-dermatodea_contig875.16892.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at S-dermatodea_contig875:20..1991+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGTAAGGTGTACTTCGACTGGGAGGCTCCCCGCAGCCGGGAGGGCTACTT
CAAGATCCGCGGTGGTGTAGACTACTGCATCGCCAGCGTAAGGTGTACTT
CGACTGGGAGGCTCCCCGCAGCCGGGAGGGCTACTTCAAGATCCGCGGTG
GTGTAGACTACTGCATCGCCAGGGGTCGTGCCTACGCGCCTCATGCCGAC
CTCCTGTGGATGGAGACAGCCAAGCCCAACATCCGCGAGGCGAAGGCCTT
TGCTACCGGCATCCACGCTACCGTCCCGCACCAGAAGCTTGCCTACAACC
TCTCCCCCAGCTTCAACTGGGACGCGGCTGGCATGTCGAAGCGAGAGATG
GCCGCGTTTAACAGGGAGCTTGGCCGCCTCGGGTTTGTCTGGCAGGGGTC
GTGCCTACGCGCCTCATGCCGACCTCCTGTGGATGGAGACAGCCAAGCCC
AACATCCGCGAGGCGAAGGCCTTTGCTACCGGCATCCACGCTACCGTCCC
GCACCAGAAGCTTGCCTACAACCTCTCCCCCAGCTTCAACTGGGACGCGG
CTGGCATGTCGAAGCGAGAGATGGCCGCGTTTAACAGGGAGCTTGGCCGC
CTCGGGTTTGTCTGGCAGTTCATCACCCTGGCAGGCTTTCACTCTGACGG
TCTCATGGTGTCCCGCCTCGCCAAAGAGTACGGAAATTCATCACCCTGGC
AGGCTTTCACTCTGACGGTCTCATGGTGTCCCGCCTCGCCAAAGAGTACG
GAAAGCACGGTGTCATCAAATACGTGGAGCTCGTGCAGAGACCCGAGCGG
GAAGAGCAGGTGGACCTTCTAACGCACCAGAGGTGGTCTGGCGCCAATCT
CATGGACAAGCAGGCACGGTGTCATCAAATACGTGGAGCTCGTGCAGAGA
CCCGAGCGGGAAGAGCAGGTGGACCTTCTAACGCACCAGAGGTGGTCTGG
CGCCAATCTCATGGACAAGCAGGTCAACACGGCCACAGGAGGGCTTTCGT
CCACTGCTGCTATGGGAGAAGGAGTCACCGAGTCTCAATTCAAGCACGGC
GGTGGCGGGGGCGTCAACACGGCCACAGGAGGGCTTTCGTCCACTGCTGC
TATGGGAGAAGGAGTCACCGAGTCTCAATTCAAGCACGGCGGTGGCGGGG
GC
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