mRNA_S-dermatodea_contig872.16866.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: D8LG95_ECTSI (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 2.150e-166 Identity = 242/312 (77.56%), Postives = 266/312 (85.26%), Query Frame = 1
Query: 10 PPYPYPCSQSSKEPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGDGEVELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQGVQIAIVREDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYRYAGYDTTYQYYGMS--DDGFFSGMAPCEVGTDCTDCGVK 939
P Y P QSSK+PL I+GTGFKGEPVLNFDPPIW+P NYT+TVVSETELKL+LA+GSLW+K G LMVKGINVGDGE+EL GKGVKVATILEDP +T +MHIYTTHTKHFPV G GF SV DP +PP IVIDGIS++NYKIQDNW + VM L LL+G +WA V EG TPIKI+SIDTGAG V P GVQIA VREDS+T LCEDSCSFA DGQCDEPGVAFGTSSSY G SYYSD+L+YNPYGLGWGYDDDANSFL TNDYS MYRYAGYDTTYQYYGM+ DDGFF+GM+PC+VGTDCTDCGVK
Sbjct: 438 PSYGQPKYQSSKQPLQILGTGFKGEPVLNFDPPIWAPDNYTVTVVSETELKLDLADGSLWSKYGGTLMVKGINVGDGEIELGGGKGVKVATILEDPTITEGEMHIYTTHTKHFPVHGTGFQSVLDPSRPPTIVIDGISSSNYKIQDNWRDNVMTLSLLEG-AWATVPEGEVTPIKIMSIDTGAGTVSLPSGVQIANVREDSSTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVK 748
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A6H5JWG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG4_9PHAE) HSP 1 Score: 206 bits (524), Expect = 9.860e-57 Identity = 109/189 (57.67%), Postives = 124/189 (65.61%), Query Frame = 1
Query: 34 QSSKEPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGDGEV--------------------------------------ELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKIQD--NWHNGVMNLQL 480
QSS+ PL I+G+GFKG+PVLNFDPPIW+P NYT+TVVSE ELKLELA+GSLW+K G LMVKGINVGDGEV EL GKGVKVATILEDP +T +MHIY THTKHFPV G G +SV DP +PP IVIDGIS++NYKIQD W +G N L
Sbjct: 378 QSSQAPLQILGSGFKGDPVLNFDPPIWAPDNYTVTVVSEAELKLELADGSLWSKYGGTLMVKGINVGDGEVTRRTVSVAPFVRSPFYASSLQHAQHSVASICVFYIPFIELGGGKGVKVATILEDPTITEGEMHIYATHTKHFPVHGTGLLSVLDPSRPPTIVIDGISSSNYKIQDCGPWGDGNSNFTL 566
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A835YLV2_9STRA (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA) HSP 1 Score: 201 bits (512), Expect = 5.860e-55 Identity = 119/303 (39.27%), Postives = 161/303 (53.14%), Query Frame = 1
Query: 31 SQSSKEPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGDGEVELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQG-VQIAIVREDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYRYAGYDTTYQYYGMSDDGFFSGMAPCEVGTDCTDCGV 936
S +S+E ++I GTGF P L FDPP+ + NYT+ +T + L L G W + G LM+ I G G V L KG+KVA IL DP V ++ IY TH+KHF G+GF+ +P P++ + G+ A +K+ NW + L L +G SWA ++ T +K+ IDTGAG+V P G V + V DS +CED+C + DG CDEP G +L N +G WGY DD +F + S GY + YG D GF G+APC+ GTDCTDCGV
Sbjct: 451 SDASRE-INIAGTGFNSHPTLVFDPPLKAGTNYTVVAAVDTMITLRLQPGKKWREAAGPLMLMSIGAGAGPVPLGGSKGIKVAFILADPTVKEENLRIYATHSKHFKFSGSGFLQQFNPYLKPIVELAGVPADVFKVDSNWTPTSIQLLLNEGKSWAKLSGAETASLKVSKIDTGAGLVTLPNGGVHVVTVHADSNEVICEDTCVYPADGTCDEPSAKTG---------------GVLGTN-HGK-WGYSDDDANFHSAGYSSSYAGQHGYLASS--YGSDDLGF--GIAPCDPGTDCTDCGV 731
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A836CM60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM60_9STRA) HSP 1 Score: 191 bits (485), Expect = 5.320e-51 Identity = 118/313 (37.70%), Postives = 159/313 (50.80%), Query Frame = 1
Query: 52 LHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINV-GDGEVELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQG---VQIAIVREDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYR---YAGYDT----------TYQYYGMSDDGFFSGMAPCEVGTDCTDCGVK 939
L I G+GFKGEP L F PP+ K+YT VSET + L L G W G L++ V G+ L G GVKVATIL DP V + IY +H+KHF V+G GF S DP P +V D + A + +QD W + + + L+DG WA +++ T+ I+++S+DTGAG+V +G V + V D +CED+C +A+DG+CDE A G Y G+ WG DD +F A N +S YAG + G D G A CE GTDCTDCG++
Sbjct: 565 LDICGSGFKGEPTLVFSPPLTKDKDYTFGAVSETAVSLRLVVGRKWRTTGGILLLVSAAVEGEDAARLGGGDGVKVATILTDPWVKERTLRIYASHSKHFTVQGGGFASKFDPALAPAVVFDSVPARVFTVQD-WTDTTLQVSLVDGYEWARLSDNATSDIRVLSVDTGAGLVAVGEGGGGVHVVTVHADDEDTICEDTCIYANDGRCDE-----------ASGEYPDD----------GVDWGLSDDEANFRA-NSFSSSDPANVYAGISXXXXXXXXXXXAFSSRGYVSDDVAFGHAECEPGTDCTDCGIQ 854
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A7S3XT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT65_HETAK) HSP 1 Score: 147 bits (370), Expect = 9.640e-36 Identity = 105/312 (33.65%), Postives = 153/312 (49.04%), Query Frame = 1
Query: 46 EPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGDGE-----VELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIV-IDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQGVQIAIVR---EDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYRYAGYDTTYQYYGMSDDGF-------FSGMAPCEVGTDCTDCG 933
+PL I G GF L F PP+ + ++YT+ V S EL L L EG W G L++ ++ E V + G G++VA IL+DP V HIY +HT ++G+GF G+ P+ + + +++++I N V+ L+L G WA V TT +KI +ID+GAG F ++IA V +D C+D+C +A DG+CDE G G Y S+Y+++ YG G +DD DY Y + Y YYG +G+APC+ GTDCTDCG
Sbjct: 495 KPLTIKGAGFVNTMTLMFYPPLMAGEDYTMAVTSGAELTLTLVEGKKWRPDHGPLLLFSVDPDGPEGKEAPVVMGSGAGMQVANILKDPVVEEQTNHIYESHTTMLTIKGSGFSGGFSVGEFPIALQLTPTKSSDFEIVSNTDT-VITLKLKPGKKWAGVGHDKTTQLKIKAIDSGAGEEQFKPPIEIAEVHSDLDDDEKGQCDDTCVYALDGECDEDG---------RGTYYGSWYNEM-----YG---GLEDD--------DYYSSYXXXXXTSDYGYYGXXXXXXXXXXXXTLNGLAPCDPGTDCTDCG 780
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A7S3XT52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT52_HETAK) HSP 1 Score: 147 bits (370), Expect = 1.000e-35 Identity = 105/312 (33.65%), Postives = 153/312 (49.04%), Query Frame = 1
Query: 46 EPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGDGE-----VELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIV-IDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQGVQIAIVR---EDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYRYAGYDTTYQYYGMSDDGF-------FSGMAPCEVGTDCTDCG 933
+PL I G GF L F PP+ + ++YT+ V S EL L L EG W G L++ ++ E V + G G++VA IL+DP V HIY +HT ++G+GF G+ P+ + + +++++I N V+ L+L G WA V TT +KI +ID+GAG F ++IA V +D C+D+C +A DG+CDE G G Y S+Y+++ YG G +DD DY Y + Y YYG +G+APC+ GTDCTDCG
Sbjct: 495 KPLTIKGAGFVNTMTLMFYPPLMAGEDYTMAVTSGAELTLTLVEGKKWRPDHGPLLLFSVDPDGPEGKEAPVVMGSGAGMQVANILKDPVVEEQTNHIYESHTTMLTIKGSGFSGGFSVGEFPIALQLTPTKSSDFEIVSNTDT-VITLKLKPGKKWAGVGHDKTTQLKIKAIDSGAGEEQFKPPIEIAEVHSDLDDDEKGQCDDTCVYALDGECDEDG---------RGTYYGSWYNEM-----YG---GLEDD--------DYYSSYXXXXXTSDYGYYGXXXXXXXXXXXXTLNGLAPCDPGTDCTDCG 780
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI) HSP 1 Score: 129 bits (325), Expect = 8.470e-30 Identity = 100/315 (31.75%), Postives = 152/315 (48.25%), Query Frame = 1
Query: 34 QSSKEPLHIMGTGFKGEPVLNFDPPIWSPKN--YTLTVVSETELKLELAEGSLWNKLPGALMVKGINVGD------GEVELADGKGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKIQDN-WHNGVMNLQLLD--GGSWAAV-TEGGTTPIKIVSIDTGAGVVLFPQG-VQIAIVREDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYRYAGYDTTYQYYGMSDDGFFSGMAPCEVGTDCTDCGVK 939
QSSK L + G GF + + + PK ++ + +SET+L + L W G L + G+ GEV+ G+KVATIL+DP+V+ + +H Y +HTKH + G GF+S + P +V+ +Y+I++ W + + + L G WA V + T +K+VS+DTG G V P G + IA VR+D T CEDSC +A+DGQCDE G + G+ + + S+ G + +L ++ G D SDD C +GTDCTDCG++
Sbjct: 406 QSSKNKLILEGEGFPTDKEAHLEFGFGGPKEGTFSCSTLSETQLAVTLVGDDKWAHQGGPLFLLKAKFGEAEQGDEGEVDYTS-PGLKVATILDDPSVSESHLHAYASHTKHITIHGIGFLSTFNFHVKPQLVLSPTLVGDYEIKEQGWTDETVTISLSTDPGAMWANVRADDKTVEVKVVSVDTGGGEVFMPGGGIVIAEVRKDDATFNCEDSCVYANDGQCDED--RDGVEAVNWSGAMTDSIGESESFTSQASG------SRGYLGSS------AMPGED--------SDDLVLVNSPSCPLGTDCTDCGLE 697
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A6U1PF74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PF74_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.440e-20 Identity = 78/234 (33.33%), Postives = 111/234 (47.44%), Query Frame = 1
Query: 271 KVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIV-IDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQGVQIAIVR------EDSTTALCEDSCSFADDGQCDEPGVAFGTSSSYAGGSYSSYYSDILSYNPYGLGWGYDDDANSFLATNDYSEMYR------YAGYDTTYQYYGMSDDGFFSGMAPCEVGTDCTDCG 933
++A +L DP VT + IY T+ G GF ++V +D A++Y++ V+ L L +G WA V G T PIK+VSID+GAG + VQIA+ + ED+ C+DSC +A DG+CD+P +D + + G WG DDD + D S++Y YAG Y YYG + +A C+ GTDCTDCG
Sbjct: 1 QIANVLRDPVVTESSKPIYAGLTQQLTFDGIGFEGGFGVSDFQIVVNLDPTPASDYEVLAKSEKLVL-LGLKEGKKWADVPAGETVPIKVVSIDSGAGEEQYNPPVQIAVAQADPSEDEDAHPGQCDDSCIYAFDGECDDPE------------------NDHVDH---GFEWGEDDD---YFYDYDDSDLYXXXXXFYYAG--GGYGYYGYDTLNY---IAACDPGTDCTDCG 204
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A835YHY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHY7_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.810e-18 Identity = 74/235 (31.49%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 52 LHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSETELKLELAEGSLW-NKLPGALMVKGINVGDGEVELADGKG-VKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPGKPPLIVIDGISAANYKI----QDNWH-----NGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDT-------------GAGVVLFPQG-VQIAIVREDSTTALCEDSCSFADDGQCDEPGVA 681
L I G+GF + L F+P + + +Y + V+ +E++L G+ W + G L V I G V L G G +KVAT+L DP+V+AA IY +HT+ V G+G VS DP P + ++ + + Y + D+W N TT + S+D GAG V+ P G V +A V+ D+ C+DSC+FA+D C E G+A
Sbjct: 652 LFISGSGFTSDMKLEFEPALTAGDDYEMDVLGPSEVRLRRQPGTSWPSDATGTLRVTSITAGGRTVPLGGGAGGIKVATVLRDPSVSAAPTAIYASHTRVLRVAGSGLVSRLDPALKPRVRLN-VPKSAYVVGDWGSDHWKYVACGNXXXXXXXXXXXXXXXXXXSATTS-RCGSLDRRGTLTAHLKFAFWGAGEVVLPDGGVLVACVQPDNPNVRCDDSCTFANDNICHEEGLA 884
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Match: A0A7S2B105_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B105_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 9.430e-12 Identity = 67/208 (32.21%), Postives = 97/208 (46.63%), Query Frame = 1
Query: 34 QSSKEPLHIMGTGFKGEP--VLNFDPPIWSPK-NYTLTVVSETELKLELAEGSLWN----KLPGALMVKGINVGDGEVELADG---KGVKVATILEDPAVTAADMHIYTTHTKHFPVRGAGFVSVQDPG----KPPLIVIDGISAANYKIQDNWHNGVMNLQLLDGGSWAAVTEGGTTPIKIVSIDTGAGVVLFPQG-VQIAIVREDS 612
QSSK P+ I G GF + VL + + NYT S + L LEL +GS W LPG LM+ ++ G G + + KG VAT+ EDP V +Y TH+ + G+GF Q P L+ + IS + + H + + L +G W+ + P+K+VSID+GAG P G V I + D+
Sbjct: 262 QSSKGPVQISGQGFSSDQLNVLRWANGLRGKGVNYTTVQASSSYLSLELKQGSKWRANGQNLPGPLMLLAVDAGAGFIPVGPTEAKKGRIVATVFEDPHVRPNSKVLYQTHSHQVWIVGSGFTRNQYSTVVTFSPNLVNGEDISVI---VHNRTH---ILVSLFNGKKWSEASG----PLKVVSIDSGAGPFALPNGGVTIGTIESDA 459 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig872.16866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig872.16866.1 >prot_S-dermatodea_contig872.16866.1 ID=prot_S-dermatodea_contig872.16866.1|Name=mRNA_S-dermatodea_contig872.16866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=313bp MVPPPYPYPCSQSSKEPLHIMGTGFKGEPVLNFDPPIWSPKNYTLTVVSEback to top mRNA from alignment at S-dermatodea_contig872:19549..24710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig872.16866.1 ID=mRNA_S-dermatodea_contig872.16866.1|Name=mRNA_S-dermatodea_contig872.16866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5162bp|location=Sequence derived from alignment at S-dermatodea_contig872:19549..24710- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig872:19549..24710- >mRNA_S-dermatodea_contig872.16866.1 ID=mRNA_S-dermatodea_contig872.16866.1|Name=mRNA_S-dermatodea_contig872.16866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at S-dermatodea_contig872:19549..24710- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |