prot_S-dermatodea_contig87126.16855.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig87126.16855.1
Unique Nameprot_S-dermatodea_contig87126.16855.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length120
Homology
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A8F0FDG9_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDG9_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.140e-59
Identity = 102/120 (85.00%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 IFFILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            I F L+NIIS+V+PLLI +AYFTLAERKIM SIQRRRGPNV+GYMGL QPLADG KLFVKET+LPTNANL LF+IAP+ITF+LSLISW VIPFGEGQVIADL LGILYSLAISSLGVYGV
Sbjct:    6 IIFTLINIISLVVPLLISVAYFTLAERKIMGSIQRRRGPNVIGYMGLLQPLADGLKLFVKETLLPTNANLILFVIAPLITFILSLISWVVIPFGEGQVIADLHLGILYSLAISSLGVYGV 125          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: Q2TUC9_DICDH (NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dictyota TaxID=2875 RepID=Q2TUC9_DICDH)

HSP 1 Score: 192 bits (489), Expect = 8.000e-59
Identity = 100/115 (86.96%), Postives = 108/115 (93.91%), Query Frame = 0
Query:    6 LNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            LNI+S+V+PLLI +AYFTLAERKIMASIQRRRGPNVVGYMGL QPLADG KLFVKETILPTNAN  LFIIAPIITFVLSLISW+VIPFG GQVI+DL LG+LYSLA+SSLGVYGV
Sbjct:    6 LNILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVVGYMGLLQPLADGLKLFVKETILPTNANTFLFIIAPIITFVLSLISWAVIPFGNGQVISDLHLGVLYSLAVSSLGVYGV 120          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A4Y5T7T0_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7T0_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.390e-58
Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0
Query:    6 LNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            LNI+S+V+PLLI +AYFTLAERKIMASIQRRRGPNV+GYMGL QPLADG KLFVKETILPTNAN  LF+ APIITFVLSLISW+VIPFG GQVIADL LGILYSLA+SSLGVYGV
Sbjct:    8 LNILSLVVPLLIAVAYFTLAERKIMASIQRRRGPNVIGYMGLLQPLADGLKLFVKETILPTNANTFLFVFAPIITFVLSLISWAVIPFGNGQVIADLPLGILYSLAVSSLGVYGV 122          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A7S6ZPD7_9STRA (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPD7_9STRA)

HSP 1 Score: 180 bits (457), Expect = 5.450e-54
Identity = 90/116 (77.59%), Postives = 108/116 (93.10%), Query Frame = 0
Query:    5 LLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            LL I+S+V+PLLI +AYFTLAERK+MASIQRRRGPNVVGYMGL QPLADG KLFVKE++LP+NAN +LF++AP+ITFVLSL+ W+VIPFG+GQV+ADL LG+LY LAISSLGVYG+
Sbjct:    5 LLTILSLVVPLLICVAYFTLAERKLMASIQRRRGPNVVGYMGLLQPLADGLKLFVKESVLPSNANSTLFLLAPMITFVLSLLGWAVIPFGQGQVVADLHLGLLYLLAISSLGVYGI 120          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A344AL68_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sargassum yezoense TaxID=127449 RepID=A0A344AL68_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.030e-53
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    4 ILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            ILLNII +V+PLLI +AYFTLAERKIMA IQRR+GPNV+GY+GL QPLADG KLFVKET+LPTNAN+ LF++AP+ITF+LSLISW+VIPF  G VI+D QLG+LY LAISSLGVYGV
Sbjct:    8 ILLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLITFILSLISWAVIPFSYGNVISDPQLGVLYFLAISSLGVYGV 124          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A1L6KY30_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY30_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.180e-53
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    4 ILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            ILLNII +V+PLLI +AYFTLAERKIMA IQRR+GPNV+GY+GL QPLADG KLFVKET+LPTNAN+ LF++AP+ITF+LSLISW+VIPF  G VI+D QLG+LY LAISSLGVYGV
Sbjct:    8 ILLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLITFILSLISWAVIPFSYGNVISDPQLGVLYFLAISSLGVYGV 124          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: E6ZEQ7_ECTSI (NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Phaeophyceae TaxID=2870 RepID=E6ZEQ7_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.670e-53
Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    4 ILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            ILLNII +VIPLLI +AYFTLAERKIMA IQRRRGPNV+GYMGL QPLADG KLFVKET+LPTNAN+ LF++AP+ TF+LSLISW+VIPF  G VIAD QLG LY LA+SSLGVYGV
Sbjct:    8 ILLNIIDLVIPLLIAVAYFTLAERKIMAGIQRRRGPNVIGYMGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLCTFILSLISWAVIPFSFGNVIADTQLGGLYFLAVSSLGVYGV 124          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A1L2F1J2_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1J2_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.840e-53
Identity = 89/116 (76.72%), Postives = 105/116 (90.52%), Query Frame = 0
Query:    5 LLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            LLNII +V+PLLI +AYFTLAERKIMA IQRR+GPNV+GY+GL QPLADG KLFVKET+LPTNAN+ LF++AP+ITF+LSLISW+VIPF  G VI+D QLG+LY LA+SSLGVYGV
Sbjct:    9 LLNIIDLVLPLLIAVAYFTLAERKIMAGIQRRKGPNVIGYLGLLQPLADGLKLFVKETVLPTNANIVLFVLAPLITFILSLISWAVIPFSFGSVISDPQLGVLYFLAVSSLGVYGV 124          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A0U1XDI1_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDI1_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 9.430e-53
Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    4 ILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            ILLNII +V+PLL+ +AYFTLAERKIMA IQRR+GPNV+GYMGL QPLADG KLFVKET+LPTNAN+ LFI+AP+ TF+LSLISW+VIPF  G VIAD QLG LY LA+SSLGVYGV
Sbjct:    8 ILLNIIDLVLPLLVAVAYFTLAERKIMAGIQRRKGPNVIGYMGLLQPLADGLKLFVKETVLPTNANIVLFILAPLCTFILSLISWAVIPFSFGNVIADTQLGGLYFLAVSSLGVYGV 124          
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Match: A0A1I9LW81_9PHAE (NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW81_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 4.790e-50
Identity = 83/115 (72.17%), Postives = 100/115 (86.96%), Query Frame = 0
Query:    6 LNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQPLADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIADLQLGILYSLAISSLGVYGV 120
            +NI+ +VIPLL+ +AYFTL ERKIM  IQRR+GPNV+GYMGL QPLADG KLFVKE +LPTNAN+ LFI+AP+ TF+LSLI W+VIPF  G VIAD+QLG+LY L++SSLGVYGV
Sbjct:   10 INILDIVIPLLVAVAYFTLTERKIMGGIQRRKGPNVIGYMGLLQPLADGLKLFVKELVLPTNANMVLFILAPLCTFILSLIIWAVIPFSFGNVIADVQLGVLYFLSVSSLGVYGV 124          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig87126.16855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FDG9_9PHAE1.140e-5985.00NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Pro... [more]
Q2TUC9_DICDH8.000e-5986.96NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Dic... [more]
A0A4Y5T7T0_9PHAE2.390e-5886.09NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Dic... [more]
A0A7S6ZPD7_9STRA5.450e-5477.59NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sch... [more]
A0A344AL68_9PHAE1.030e-5377.78NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sar... [more]
A0A1L6KY30_9PHAE1.180e-5377.78NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Sar... [more]
E6ZEQ7_ECTSI1.670e-5379.49NADH-ubiquinone oxidoreductase chain 1 n=66 Tax=Ph... [more]
A0A1L2F1J2_9PHAE4.840e-5376.72NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Sar... [more]
A0A0U1XDI1_9PHAE9.430e-5377.78NADH-ubiquinone oxidoreductase chain 1 n=34 Tax=Ph... [more]
A0A1I9LW81_9PHAE4.790e-5072.17NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Ple... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 7..120
e-value: 3.7E-39
score: 134.8
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 3..120
NoneNo IPR availablePANTHERPTHR11432:SF3NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1coord: 3..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..118
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved sitePROSITEPS00667COMPLEX1_ND1_1coord: 46..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig87126contigS-dermatodea_contig87126:2..361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig87126.16855.1mRNA_S-dermatodea_contig87126.16855.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig87126 2..361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig87126.16855.1 ID=prot_S-dermatodea_contig87126.16855.1|Name=mRNA_S-dermatodea_contig87126.16855.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
IFFILLNIISVVIPLLIGIAYFTLAERKIMASIQRRRGPNVVGYMGLFQP
LADGFKLFVKETILPTNANLSLFIIAPIITFVLSLISWSVIPFGEGQVIA
DLQLGILYSLAISSLGVYGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001694NADH_UbQ_OxRdtase_su1/FPO
IPR018086NADH_UbQ_OxRdtase_su1_CS