mRNA_S-dermatodea_contig8712.16854.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: D7FWP0_ECTSI (Beta-hydroxyacyl-ACP dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP0_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.230e-72 Identity = 119/155 (76.77%), Postives = 129/155 (83.23%), Query Frame = 1
Query: 4 LAPAAAFVVGPSTLTGATTRQAARSAAGPALRMGEDAE----KKAAKPTALDISAGIAHPEAVFTVPENILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
LAP+A F+ + T A AA S+ PALRM E+A ++A PTA DIS GIAHPEA+FTVPENILKVLPHRYPFALVDKVLHF PGK I+G+KCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV
Sbjct: 24 LAPSA-FMGSNTAPTAAARAAAASSSRVPALRMAEEAAAGEGEEAPAPTASDISKGIAHPEAIFTVPENILKVLPHRYPFALVDKVLHFVPGKSIIGIKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 177
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A836C6N5_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6N5_9STRA) HSP 1 Score: 184 bits (466), Expect = 8.530e-57 Identity = 85/102 (83.33%), Postives = 93/102 (91.18%), Query Frame = 1
Query: 151 SAGIAHPEAVFTVPENILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
S GIAHPEA+FTV E+I K+LPHRYPFALVDKV++FEPGKR VG+KCITNNEPQFTGHFPD PIMPGVLQVEAMAQLGG+I LQ P SDG+GTFFF GVDGV
Sbjct: 12 SKGIAHPEAIFTVDEHIAKILPHRYPFALVDKVIYFEPGKRAVGIKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGIIALQAPISDGKGTFFFGGVDGV 113
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A7R9UF58_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF58_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.040e-44 Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 1
Query: 172 EAVFTVPENILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
E VF V E I VLPHRYPFALVDKV+ FE GKR VG+KC+TNNEPQFTGHFPD PIMPGVL +EAMAQLGG+I LQEP SDG+G FFFAG++GV
Sbjct: 62 ETVFPV-EKIADVLPHRYPFALVDKVVEFEAGKRAVGIKCVTNNEPQFTGHFPDRPIMPGVLMIEAMAQLGGVIALQEPLSDGKGIFFFAGIEGV 155
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A7S3X4Z6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X4Z6_9SPIT) HSP 1 Score: 150 bits (379), Expect = 3.360e-44 Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 196 NILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
I K+LPHRYPF LVDKV+HFE GK+ VGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGG++CLQ+P SDGQG FFFAG+DG+
Sbjct: 32 QIAKILPHRYPFLLVDKVVHFEAGKKAVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGIVCLQDPVSDGQGEFFFAGIDGI 118
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A7S3GZN9_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZN9_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.970e-44 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1
Query: 199 ILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
I K+LPHRYPF LVDKV+ FEPGKR VGVK +T NEPQFTGHFPDLPIMPGVL VEAMAQLGG++CLQ P SDG+G FFFAG+DGV
Sbjct: 13 IAKILPHRYPFLLVDKVVSFEPGKRAVGVKNVTANEPQFTGHFPDLPIMPGVLMVEAMAQLGGIVCLQAPISDGKGQFFFAGIDGV 98
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A7S2DJT4_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S2DJT4_9DINO) HSP 1 Score: 151 bits (381), Expect = 1.220e-43 Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = 1
Query: 193 ENILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
E + K+LPHRYPF LVDKV+ FE GKRIVGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGGL+CLQ+P SDG+G FFFAG+DG+
Sbjct: 44 EGVAKILPHRYPFLLVDKVVEFEAGKRIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQQPVSDGKGEFFFAGIDGI 131
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A0G4H2S5_VITBC (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2S5_VITBC) HSP 1 Score: 150 bits (380), Expect = 5.210e-43 Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 1
Query: 193 ENILKVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
E I KVLPHRYPF LVDKV+ FEPGKR VGVK I+ NEPQFTGHFP+ IMPGVLQ+EAMAQLGGL+CLQEP SDG+G FFFAGVDGV
Sbjct: 85 EAIRKVLPHRYPFLLVDKVIEFEPGKRAVGVKTISANEPQFTGHFPERAIMPGVLQIEAMAQLGGLVCLQEPLSDGKGDFFFAGVDGV 172
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A1S6K873_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gambierdiscus belizeanus TaxID=439316 RepID=A0A1S6K873_9DINO) HSP 1 Score: 151 bits (382), Expect = 6.650e-43 Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 172 EAVFTVPENIL--KVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
E+V V +N+ KVLPHRYPF LVDKV+ FEPGK+IVGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGGL+CLQ P SDGQG FFFAG+DG+
Sbjct: 108 ESVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQAPISDGQGEFFFAGIDGI 204
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A1S6K7Y0_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gambierdiscus excentricus TaxID=986170 RepID=A0A1S6K7Y0_9DINO) HSP 1 Score: 150 bits (380), Expect = 1.190e-42 Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 172 EAVFTVPENIL--KVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
E V V +N+ KVLPHRYPF LVDKV+ FEPGK+IVGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGGL+CLQ+P SDG+G FFFAG+DG+
Sbjct: 104 EGVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQDPISDGKGEFFFAGIDGI 200
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Match: A0A6T1MGQ0_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1MGQ0_9DINO) HSP 1 Score: 150 bits (379), Expect = 2.090e-42 Identity = 82/132 (62.12%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 67 AARSAAGPALRMGEDAEKKAAKPTALDISAGIAHPEAVFTVPENIL--KVLPHRYPFALVDKVLHFEPGKRIVGVKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 456
AA + AG R D E K AK + +G+ E+V V +N+ KVLPHRYPF LVDKVL +EPGKR VGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGG++CLQ P SDGQG FFFAG++G+
Sbjct: 80 AAAARAGRVRRCSSD-EAKEAKWKGAESFSGLT--ESVPLVMDNVAVAKVLPHRYPFLLVDKVLEYEPGKRAVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGIVCLQPPVSDGQGEFFFAGINGI 208 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8712.16854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8712.16854.1 >prot_S-dermatodea_contig8712.16854.1 ID=prot_S-dermatodea_contig8712.16854.1|Name=mRNA_S-dermatodea_contig8712.16854.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=152bp LLAPAAAFVVGPSTLTGATTRQAARSAAGPALRMGEDAEKKAAKPTALDIback to top mRNA from alignment at S-dermatodea_contig8712:6836..7889+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8712.16854.1 ID=mRNA_S-dermatodea_contig8712.16854.1|Name=mRNA_S-dermatodea_contig8712.16854.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1054bp|location=Sequence derived from alignment at S-dermatodea_contig8712:6836..7889+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8712:6836..7889+ >mRNA_S-dermatodea_contig8712.16854.1 ID=mRNA_S-dermatodea_contig8712.16854.1|Name=mRNA_S-dermatodea_contig8712.16854.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at S-dermatodea_contig8712:6836..7889+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |