prot_S-dermatodea_contig8712.16853.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8712.16853.1
Unique Nameprot_S-dermatodea_contig8712.16853.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length242
Homology
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: D7FWN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 6.190e-100
Identity = 187/212 (88.21%), Postives = 194/212 (91.51%), Query Frame = 0
Query:   28 GVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GDFKTAPSSVSRKAVMAPIAKAAKSLNKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            GVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP+       XXXXXXXXXXXXXXXXXXXXXX     D K AP+SVSRKAVMAPIAKA KSLNK+T PR+FEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFL+ELA+REA+NEQFQFLKHTHALFSYFT  V
Sbjct:   47 GVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPRAAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLV 258          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A836C863_9STRA (Surp module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.910e-70
Identity = 136/203 (67.00%), Postives = 152/203 (74.88%), Query Frame = 0
Query:   29 VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSLNKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYF 231
            VE   QGKVKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P       XXXXXXXXXXX                TA ++V +KAVMAPIAKAA+++ K   P  F FS GHPTGLTA D+DLIKLTAQ+TA GGR FL+ LAR+EA+NE FQFLK  HALFSYF
Sbjct:   33 VEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKA-----TAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYF 230          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: W7TP71_9STRA (SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.950e-51
Identity = 108/211 (51.18%), Postives = 133/211 (63.03%), Query Frame = 0
Query:   29 VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN---GDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSLNK-STPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            + Q   GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE    G A K                                    ++VS+ +V+ PIAKAA  L+K   PP   EF + HP GL  LDV++IKLTAQ+TA  GR FL+ LA+RE +N  F+FLK +H LFSYFT  V
Sbjct:   25 IIQGRSGKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVSAAPTTTVSKASVLGPIAKAA--LHKPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLV 233          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.390e-51
Identity = 108/211 (51.18%), Postives = 133/211 (63.03%), Query Frame = 0
Query:   29 VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN---GDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSLNK-STPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            + Q   GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE    G A K                                    ++VS+ +V+ PIAKAA  L+K   PP   EF + HP GL  LDV++IKLTAQ+TA  GR FL+ LA+RE +N  F+FLK +H LFSYFT  V
Sbjct:   25 IIQGRSGKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVSAAPTTTVSKASVLGPIAKAA--LHKPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLV 233          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A8J2SH94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.710e-48
Identity = 104/206 (50.49%), Postives = 129/206 (62.62%), Query Frame = 0
Query:   32 PYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKA-VMAPIAKAAKSLNK-STPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            P  G+V G+I PPPDIRAIVDKTA FVA+NGK FE RIQAS EG+S KF FMRP+DPY AYYEFKIR+ EEN    K                              + K A S+VS++A V AP+ +A + L + +TPP      +  P+ +T LD ++IKLTAQ+TA  GR FL+ LA+RE +N QF FLK TH LFSYFT+ V
Sbjct:   22 PSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEENDGELKVVEKPKVEAPVTT-----------------EVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYFTQLV 210          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A7S3LZB0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.320e-47
Identity = 126/203 (62.07%), Postives = 151/203 (74.38%), Query Frame = 0
Query:   34 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSL-NKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            QGK+ G+I PPP+IRA+VDKTA FVAK GKSFE+R+ ASEEGK+AKFNFMRP DPY+AYYE KIR+ E       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       ++V + +++ PIA+ A++   +++P   F  +  HP GLT  DVD IKL AQ+TAV GR FL+ LA RE +N QF FLK TH LFSYFT  V
Sbjct:    8 QGKITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTV-KASILNPIAQLAQTKPTEASPELEFSVANSHPAGLTPFDVDAIKLAAQYTAVNGREFLANLALREQRNPQFDFLKPTHMLFSYFTYLV 209          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A6G0X937_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X937_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.010e-38
Identity = 115/200 (57.50%), Postives = 144/200 (72.00%), Query Frame = 0
Query:   34 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSL-NKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFT 232
            QG+V G+IYPPP+IRA+VDKTA+FVA+NG+SFE +I    E  SAKF+F++P DPY AYYE K+++FE   +   XXXXXXXXXXXXXXXXXXXXXXXX     G        V +KAV   ++K+ KSL +K+ PP   +F   HPT LT LD +++ LTAQ+TAV G+ FLS LA RE +N QF FLK TH LF+YFT
Sbjct:   11 QGRVTGLIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPSDPYNAYYEHKVQEFENQANXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIEVG-------VVEKKAVDGIVSKSVKSLKDKNEPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYFT 200          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A6A4YYN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YYN6_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.050e-38
Identity = 100/199 (50.25%), Postives = 133/199 (66.83%), Query Frame = 0
Query:   35 GKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSL-NKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFT 232
            G+V GIIYPPP+IRA+VDKTA+FVA+NG+SFE +I    E  SAKF+F++P+DPY+AYYE K+ +FE   + P+       XXXXXXXXXXXX             K     V +K + A ++K+ + + +K+ PP   +F   HPT LT LD +++ LTAQ+TAV G+ FLS LA RE +N QF FLK TH LF+YFT
Sbjct:   13 GRVTGIIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPNDPYHAYYEHKVEEFETQLNEPEPAKSPAAXXXXXXXXXXXXAPAALPSEPA---KIEVGVVEKKPIEAVVSKSLQKIKDKNQPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYFT 205          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: A0A8K1FFU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFU8_PYTOL)

HSP 1 Score: 151 bits (382), Expect = 1.320e-38
Identity = 100/205 (48.78%), Postives = 131/205 (63.90%), Query Frame = 0
Query:   34 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF-EENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSLNKST--PPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            QG+V G+IYPPPDIRAIVDKTA+FVA+NG+SFE +I    E  + +F+F++  DPY AYYE K+ +F E+N   P+                 XXXXXXXXX            V +KAV A  AK AK L ++T  PP   +F + HP  L+ALD +++ LTAQ+TA+ G++FL+ LA RE +N QF FLK THALF+YFT  V
Sbjct:    8 QGRVTGLIYPPPDIRAIVDKTAQFVARNGRSFERKIAG--ETANPRFSFLKAADPYNAYYEHKVNEFIEQNAQPPQETPAPAAAAPVSQETAAXXXXXXXXXVETPVAPQGDVVVEKKAVEAVTAKVAKKLRETTLSPPEEEKFKIKHPQ-LSALDQEIMYLTAQYTALSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALV 209          
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Match: F0WZA1_9STRA (Splicing factor 3 subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZA1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.460e-38
Identity = 102/204 (50.00%), Postives = 132/204 (64.71%), Query Frame = 0
Query:   34 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFKTAPSSVSRKAVMAPIAKAAKSLNKST--PPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLSELARREAKNEQFQFLKHTHALFSYFTRCV 235
            QGKV G+IYPPPDIRA+VDKTA+FVA+NG++FE R+    E  S KF+F++P DPY+AYYEFK+ +F E     +     XXXXXXXXXXXXX                      +KAV    AK ++ LN+ T  PP    + + HPT L+ALD +++ LTAQ+TA  G++FL+ LA RE +N QF FLK THALF+YFT  V
Sbjct:  221 QGKVTGLIYPPPDIRAVVDKTAQFVARNGRNFERRLAG--ETSSTKFSFLKPSDPYHAYYEFKVNEFTEKEFVTEENKKSXXXXXXXXXXXXXPEKSGIAENKLDAVNKNQVIFEKKAVETLTAKVSRKLNEKTIEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALV 421          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8712.16853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN9_ECTSI6.190e-10088.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C863_9STRA2.910e-7067.00Surp module-domain-containing protein n=1 Tax=Trib... [more]
W7TP71_9STRA3.950e-5151.18SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A4D9CLT9_9STRA4.390e-5151.18Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J2SH94_9STRA4.710e-4850.49Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3LZB0_9STRA2.320e-4762.07Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A6G0X937_9STRA1.010e-3857.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4YYN6_9STRA1.050e-3850.25Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1FFU8_PYTOL1.320e-3848.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WZA1_9STRA1.460e-3850.00Splicing factor 3 subunit putative n=1 Tax=Albugo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 48..102
e-value: 5.7E-18
score: 75.7
coord: 187..240
e-value: 1.9E-9
score: 47.4
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 48..97
e-value: 4.3E-16
score: 58.7
coord: 188..235
e-value: 3.9E-14
score: 52.4
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 50..93
score: 17.269
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 189..231
score: 14.017
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 45..105
e-value: 6.4E-23
score: 82.3
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 182..236
e-value: 2.6E-17
score: 64.6
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 167..236
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 37..98
NoneNo IPR availablePANTHERPTHR15316:SF1SPLICING FACTOR 3A SUBUNIT 1coord: 36..235
NoneNo IPR availablePANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 36..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8712contigS-dermatodea_contig8712:261..5621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8712.16853.1mRNA_S-dermatodea_contig8712.16853.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8712 261..5621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8712.16853.1 ID=prot_S-dermatodea_contig8712.16853.1|Name=mRNA_S-dermatodea_contig8712.16853.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
AEAALSNGGTAGEEAGVGEEGAGAGDSGVEQPYQGKVKGIIYPPPDIRAI
VDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF
EENGDAPKPAPAKPVATEAEGDGDGGEDEGGAAAAGAGDFKTAPSSVSRK
AVMAPIAKAAKSLNKSTPPRSFEFSVGHPTGLTALDVDLIKLTAQFTAVG
GRNFLSELARREAKNEQFQFLKHTHALFSYFTRCVLLIFTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
IPR035967SWAP/Surp_sf