mRNA_S-dermatodea_contig8710.16850.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI) HSP 1 Score: 300 bits (768), Expect = 3.110e-101 Identity = 142/184 (77.17%), Postives = 162/184 (88.04%), Query Frame = 1
Query: 82 VGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGELL 633
V A A + VTHRV+FD+SIGG + RITMGLFGNAVP TV+NFR+LCTGEAG GKVY+KPLHYK S FHR+IPQFMLQGGDFTH TGTGGESIYGGKFDDEAF P+L+H+KPGV+SMAN+GK+TNGSQFFICTVPTPWL+ KHVIFGQVEE SM++V IEK+GSR G S +VEITDSGEL+
Sbjct: 18 VSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELV 201
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA) HSP 1 Score: 259 bits (662), Expect = 4.040e-85 Identity = 125/174 (71.84%), Postives = 141/174 (81.03%), Query Frame = 1
Query: 109 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
VT VFFD+ I G+P RI MGL+G AVP TV+NFR LCTGE G GKVY KPL YK S FHRIIPQFMLQGGDFTH TGTGGESIYGGKFDDEAF +L H +PG++SMANAG NTNGSQFFI TV TPWLD KHVIFG+V E MDVV +IEK+GS+ G P A+V++ DSGE+
Sbjct: 24 VTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLEG-MDVVKSIEKLGSQSGRPQAKVKVADSGEI 196
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A2K1IH38_PHYPA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IH38_PHYPA) HSP 1 Score: 239 bits (609), Expect = 5.250e-77 Identity = 129/210 (61.43%), Postives = 147/210 (70.00%), Query Frame = 1
Query: 1 MARILKSLAVAAVGLFAAASAAGDVTEVGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
MAR LAV A+ L A S A E G VTH+VFFDV IGGQP+ R+ MGLFG A P TV+NFR LCTGE G G + KPLH+K S FHRIIP FM+QGGDFTH G GGESIYG KF DE+F L H PG++SMANAG NTNGSQFFICTV T WLD +HV+FG+V S MDVVY +E G+ GGTP +V I DSGE+
Sbjct: 1 MARTGPMLAVTALVLLATISCAQAKIEKGL----DEVTHKVFFDVEIGGQPAGRVVMGLFGKAAPKTVENFRALCTGEKGKG-LSGKPLHFKGSAFHRIIPSFMIQGGDFTHGNGRGGESIYGEKFADESFK--LKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDGRHVVFGKVL-SGMDVVYKVEAEGTSGGTPKKKVTIADSGEI 202
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A7J7Q6Q0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6Q0_9CHLO) HSP 1 Score: 234 bits (597), Expect = 3.490e-75 Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 1
Query: 103 SAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
+AVT++VFFD+ I GQP+ RI MGLFG+ VP TV+NFR LCTGE GTGK KPLH+K S+FHR+IPQFMLQGGDFT GTGGESIYG KF DE F L H PG +SMANAG NTNGSQFFI TV T WLD +HV+FG+V E MDVVY +E +GS GG S +V I DSGEL
Sbjct: 29 AAVTNKVFFDIEIDGQPAGRIVMGLFGDVVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRVIPQFMLQGGDFTRSDGTGGESIYGEKFADENFK--LKHKGPGYLSMANAGPNTNGSQFFITTVKTTWLDGRHVVFGKVIEG-MDVVYKVEAVGSGGGATSKKVVIADSGEL 200
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A8J282_CHLRE (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8J282_CHLRE) HSP 1 Score: 234 bits (597), Expect = 6.300e-75 Identity = 122/208 (58.65%), Postives = 150/208 (72.12%), Query Frame = 1
Query: 16 KSLAVAAVGLFAAASAAGDVTEVGA---TATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
++LA+A +GL A+ + G+ A ++ +TH+V+FDV I G+P RI +GL+GN VP TV+NFR LCTGE GTG KPLH+KNSIFHRIIPQFM+QGGDFT GTGGESIYG +F DE F L H PGV+SMANAG +TNGSQFFI TV T WLD +HV+FG+V E MDVVY +E +G+ G PS +V I DSGEL
Sbjct: 17 RALALALLGLVVLAATGVHAAKKGSKKKVAADTTITHKVYFDVEIDGKPEGRIVVGLYGNTVPKTVENFRALCTGEKGTG-TSGKPLHFKNSIFHRIIPQFMIQGGDFTRGDGTGGESIYGSRFPDENFA--LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVVEG-MDVVYKVEAVGTSSGKPSKKVTIADSGEL 220
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: C1EA22_MICCC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EA22_MICCC) HSP 1 Score: 233 bits (593), Expect = 1.160e-74 Identity = 117/174 (67.24%), Postives = 135/174 (77.59%), Query Frame = 1
Query: 109 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
+T++V+FDVSIGGQP+ RITMGL+G AVP TV+NFR LCTGE G G KPLHYK SIFHRIIPQFMLQGGDFT G GGESIYG KF DE+F + H+ G +SMANAG NTNGSQFFI T+ T WLD +HV+FG+V E MDVVY +E +GS+ G PS V ITDSGEL
Sbjct: 27 ITNKVYFDVSIGGQPAGRITMGLYGTAVPKTVENFRALCTGEKGVGN-RGKPLHYKGSIFHRIIPQFMLQGGDFTDGNGRGGESIYGEKFADESFA--IKHSGAGDLSMANAGPNTNGSQFFITTIKTAWLDGRHVVFGKVLEG-MDVVYKVEAVGSQSGKPSKEVVITDSGEL 196
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: C1MI65_MICPC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MI65_MICPC) HSP 1 Score: 233 bits (593), Expect = 1.320e-74 Identity = 121/186 (65.05%), Postives = 140/186 (75.27%), Query Frame = 1
Query: 85 GATATNSA--VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGELLA 636
GATA++++ VT +VFFDVSIGG P+ RITMGL+G+ VP T +NFR L TGE GTGK KPLHYK S FHR+IP FM+QGGDFT G GGESIYG KF DE F L H PG +SMAN+G NTNGSQFFICT+ T WLD +HV+FG+V E MDVVY IE +GS GTPS V ITDSG+L A
Sbjct: 21 GATASDASPKVTDKVFFDVSIGGIPAGRITMGLYGDVVPKTAENFRALATGEKGTGK-RGKPLHYKGSTFHRVIPNFMIQGGDFTDGNGRGGESIYGAKFADENF--SLQHAGPGDLSMANSGPNTNGSQFFICTIKTSWLDGRHVVFGKVLEG-MDVVYKIEAVGSSSGTPSKEVTITDSGQLPA 202
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A835Y0M8_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0M8_9CHLO) HSP 1 Score: 233 bits (594), Expect = 1.340e-74 Identity = 126/205 (61.46%), Postives = 147/205 (71.71%), Query Frame = 1
Query: 22 LAVAAVGLFAAASA--AGDVTEVGATATNSAVTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
LA+AA+ L AA+S A ++ A ++ VTH+V+FD+ I G+P RI MGL+GN VP TVDNFR LCTGE G G KPL YK SIFHRIIPQFMLQGGDFT GTGGESIYG +F DE F L H PGV+SMANAG +TNGSQFFI TV T WLD +HV+FG+VE+ MD+VY IE GS G PS V+I DSGEL
Sbjct: 11 LAIAALVLVAASSGVHAAKKSKKSKIAADTTVTHKVYFDIEIDGKPEGRIVMGLYGNTVPKTVDNFRALCTGEKGQG-TSGKPLTYKGSIFHRIIPQFMLQGGDFTRGDGTGGESIYGSRFPDENFA--LKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVEDG-MDLVYKIESYGSSSGKPSKTVKIVDSGEL 211
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC) HSP 1 Score: 231 bits (590), Expect = 2.540e-74 Identity = 115/174 (66.09%), Postives = 133/174 (76.44%), Query Frame = 1
Query: 109 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
VTH+VFFD+++ G+ + RI MGL+G+ VP TV+NFR LCTGE G GK KPLHYK S FHR+IP FMLQGGDFTH TGTGGESIYG KF+DE F L H PG +SMANAGKNTNGSQFFI TV T WLD KHV+FG+V E MD+V +E +GS+ G S VEI DSGEL
Sbjct: 21 VTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLEG-MDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Match: A0A0D2MNZ0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MNZ0_9CHLO) HSP 1 Score: 232 bits (591), Expect = 2.840e-74 Identity = 116/174 (66.67%), Postives = 133/174 (76.44%), Query Frame = 1
Query: 109 VTHRVFFDVSIGGQPSKRITMGLFGNAVPLTVDNFRKLCTGEAGTGKVYKKPLHYKNSIFHRIIPQFMLQGGDFTHETGTGGESIYGGKFDDEAFLPDLMHNKPGVISMANAGKNTNGSQFFICTVPTPWLDNKHVIFGQVEESSMDVVYAIEKMGSRGGTPSARVEITDSGEL 630
VTH+VFFD+ I G+P+ RI MGLFG+ VP TV+NFR LCTGE GTGK KPLH+K S+FHRIIPQFM+QGGDFT GTGGESIYG KF DE F L H PG +SMANAG NTNGSQFFI TV T WLD +HV+FG+V E MDVV +E +GS GTPS +V I DSGE+
Sbjct: 31 VTHKVFFDIEIDGKPAGRIVMGLFGDIVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRIIPQFMIQGGDFTRGDGTGGESIYGEKFADENFK--LKHKAPGYLSMANAGPNTNGSQFFITTVKTAWLDGRHVVFGKVIEG-MDVVLKVEAIGSGSGTPSKKVTIADSGEI 200 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8710.16850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8710.16850.1 >prot_S-dermatodea_contig8710.16850.1 ID=prot_S-dermatodea_contig8710.16850.1|Name=mRNA_S-dermatodea_contig8710.16850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=213bp MARILKSLAVAAVGLFAAASAAGDVTEVGATATNSAVTHRVFFDVSIGGQback to top mRNA from alignment at S-dermatodea_contig8710:5169..8608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8710.16850.1 ID=mRNA_S-dermatodea_contig8710.16850.1|Name=mRNA_S-dermatodea_contig8710.16850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3440bp|location=Sequence derived from alignment at S-dermatodea_contig8710:5169..8608+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8710:5169..8608+ >mRNA_S-dermatodea_contig8710.16850.1 ID=mRNA_S-dermatodea_contig8710.16850.1|Name=mRNA_S-dermatodea_contig8710.16850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at S-dermatodea_contig8710:5169..8608+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |