prot_S-dermatodea_contig86752.16822.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86752.16822.1
Unique Nameprot_S-dermatodea_contig86752.16822.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length52
Homology
BLAST of mRNA_S-dermatodea_contig86752.16822.1 vs. uniprot
Match: A0A6H5KXC7_9PHAE (Fucosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC7_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 8.180e-6
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   13 QASDFKNPKALARYLLMLTEDDQAYEEYFKWRDDPVEE 50
            +ASDF +P  L ++L ML  +++AYE YFKWRDDP EE
Sbjct:  660 KASDFSSPAELGKHLKMLAANEEAYEAYFKWRDDPEEE 697          
BLAST of mRNA_S-dermatodea_contig86752.16822.1 vs. uniprot
Match: A0A6P4YMF0_BRABE (Fucosyltransferase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YMF0_BRABE)

HSP 1 Score: 49.3 bits (116), Expect = 2.080e-5
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    8 PSNGCQASDFKNPKALARYLLMLTEDDQAYEEYFKWRDDP 47
            P++     DF++PKALARY+  L EDD  Y +YFKWR  P
Sbjct:  328 PNSFIHVDDFESPKALARYIKTLNEDDAKYNQYFKWRTTP 367          
BLAST of mRNA_S-dermatodea_contig86752.16822.1 vs. uniprot
Match: D7G396_ECTSI (Fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G396_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 2.080e-5
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   13 QASDFKNPKALARYLLMLTEDDQAYEEYFKWRDDPVEE 50
            +ASDF +P  L  +L ML  +++AYE YFKWRDDP EE
Sbjct:  364 KASDFSSPADLGNHLKMLAANEEAYEAYFKWRDDPEEE 401          
BLAST of mRNA_S-dermatodea_contig86752.16822.1 vs. uniprot
Match: A0A7R8H1G8_LEPSM (Fucosyltransferase n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8H1G8_LEPSM)

HSP 1 Score: 48.9 bits (115), Expect = 2.830e-5
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0
Query:    8 PSNGCQASDFKNPKALARYLLMLTEDDQAYEEYFKWR 44
            P +     DFKNPKALA YL+ L ++D AY EYFKW+
Sbjct:  250 PHSFINVRDFKNPKALAEYLMYLDKNDTAYSEYFKWK 286          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86752.16822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KXC7_9PHAE8.180e-657.89Fucosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A6P4YMF0_BRABE2.080e-552.50Fucosyltransferase n=1 Tax=Branchiostoma belcheri ... [more]
D7G396_ECTSI2.080e-557.89Fucosyltransferase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7R8H1G8_LEPSM2.830e-556.76Fucosyltransferase n=3 Tax=Lepeophtheirus salmonis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 13..47
e-value: 1.8E-9
score: 37.5
IPR038577GT10-like superfamilyGENE3D3.40.50.11660coord: 3..52
e-value: 4.7E-5
score: 25.4
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 14..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86752contigS-dermatodea_contig86752:485..640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86752.16822.1mRNA_S-dermatodea_contig86752.16822.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86752 485..640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86752.16822.1 ID=prot_S-dermatodea_contig86752.16822.1|Name=mRNA_S-dermatodea_contig86752.16822.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=52bp
NPTQPNSPSNGCQASDFKNPKALARYLLMLTEDDQAYEEYFKWRDDPVEE
EK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10
IPR038577GT10-like_sf