prot_S-dermatodea_contig86722.16816.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86722.16816.1
Unique Nameprot_S-dermatodea_contig86722.16816.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length38
Homology
BLAST of mRNA_S-dermatodea_contig86722.16816.1 vs. uniprot
Match: D8LMR4_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR4_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.140e-13
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 MEKCYIINAPWVFYALWKGLAPLMSVNTAKKVQV 34
            MEKCYIINAPWVFYALWKGL PLMS  TAKKVQ+
Sbjct:  367 MEKCYIINAPWVFYALWKGLQPLMSAGTAKKVQM 400          
BLAST of mRNA_S-dermatodea_contig86722.16816.1 vs. uniprot
Match: A0A6H5JNT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT5_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.440e-12
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MEKCYIINAPWVFYALWKGLAPLMSVNTAKKVQV 34
            MEKCYIINAPWVFYALWKGL PLMS  TA KVQ+
Sbjct:  449 MEKCYIINAPWVFYALWKGLQPLMSAGTANKVQM 482          
BLAST of mRNA_S-dermatodea_contig86722.16816.1 vs. uniprot
Match: A0A835YKX5_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.320e-7
Identity = 17/34 (50.00%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MEKCYIINAPWVFYALWKGLAPLMSVNTAKKVQV 34
            M+ C+++NAPW+F+A++KG+ PLMS +T  KV++
Sbjct:   33 MDTCFLVNAPWIFFAVFKGVKPLMSAHTVAKVKL 66          
BLAST of mRNA_S-dermatodea_contig86722.16816.1 vs. uniprot
Match: A0A7S3USY2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USY2_HETAK)

HSP 1 Score: 48.9 bits (115), Expect = 1.460e-5
Identity = 17/34 (50.00%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    1 MEKCYIINAPWVFYALWKGLAPLMSVNTAKKVQV 34
            M +C I+NAPWVF+ LW+ + P++S ++A KV+V
Sbjct:   42 MHRCIIVNAPWVFFTLWRVIKPMLSEHSANKVKV 75          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86722.16816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMR4_ECTSI5.140e-1388.24CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNT5_9PHAE2.440e-1285.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKX5_9STRA2.320e-750.00CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3USY2_HETAK1.460e-550.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 1..37
e-value: 6.6E-9
score: 37.2
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 2..34
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 1..34
e-value: 3.5E-6
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86722contigS-dermatodea_contig86722:165..278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86722.16816.1mRNA_S-dermatodea_contig86722.16816.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86722 156..278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86722.16816.1 ID=prot_S-dermatodea_contig86722.16816.1|Name=mRNA_S-dermatodea_contig86722.16816.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=38bp
MEKCYIINAPWVFYALWKGLAPLMSVNTAKKVQVGAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf
IPR001251CRAL-TRIO_dom