mRNA_S-dermatodea_contig12745.1680.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig12745.1680.1
Unique Name	mRNA_S-dermatodea_contig12745.1680.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.170e-19
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 3

Query:    3 PSRCLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWT-DVTGPATR---HGEQLR--SPRVPCLRFRMVAWYLPTSALADARDRFTGLK----KLTLVGD-LDTRVDKSIWPRG 377
            PSRCLDAF VALN+ACDG  W+ ST+QLQL+S+ FC ACRSVPT  L+ D +TP  +++ D    A R   HG   R  + RVP LR R V W L     +    R TG+     +L ++GD ++  +D+++W  G
Sbjct:   27 PSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQL-----SGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDG 157

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.540e-18
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 3

Query:    6 SRCLDAFIVALNEACDGM--RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRH 206
            S+CLDAF+VALN+ CDG   RW+AST +LQL S+EFCGACR VPT  +R D  TP+ +W+  T P T H
Sbjct:   39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAH 107

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 6.060e-17
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 3

Query:    3 PSRCLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRAD-VNTPKHIWTDVTGPATRHGEQLRSPR-VPCLRFRMVAWYLPTSALADARDRFTGLKKLTLVGDLDTRVDKSIWP 371
            P RCL+AF VALN +CDG  W+ STK+LQLAS++FC  CR VP+  L  +  + P  +W D      R G +  S   VP  R R V W  P   L+D    F  +++  +    DT VD  +WP
Sbjct:    4 PGRCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDICLVFAKVERFLV--RQDTVVDDVVWP 126

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.220e-16
Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 3

Query:    6 SRCLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVT-GPATRHGEQLRSP------RVPCLRFRMVAWYLPTSALADAR-DRFTGLKKLTLVG-DLDTRVDKSIWPRG 377
            S+CL+AF+VAL+  CDG +W+AST+QLQLAS++ C ACR VPT +L  + +TP+++W +   GP  R   + + P      RVP    R V W L    L  AR + +  ++ L   G   D   D   WP G
Sbjct:   10 SQCLEAFVVALDLTCDGEKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWAEAARGPRGRLTGEKKPPAARTRTRVPPFGPRRVMWKLRARELGLARKELWANVQCLLFTGYHNDWVCDGFSWPTG 142

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.460e-15
Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 3

Query:   12 CLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSA-LADARDRFTGLKKLTLVGDLDTRVDKSIWPR 374
            CL+A IVALNE  DG  W+ STK+ QLAS+EFC ACR+  T  L+ D  TP+ +      P   H ++L   RVP LR R V W +PT+A L ++         L  V   +  ++   WPR
Sbjct:   12 CLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPP-HPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPR 132

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.180e-15
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 3

Query:    6 SRCLDAFIVALNEACDGM--RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPAT---RHGEQLRSPRVPCLRFRMVAWYLPTSAL 284
            S CL AFIVALN+ C+G   RW+AST +LQL S+EFCGACR VPT  +R D  TP+ +W+     AT   R  E   S RVP ++   + W L    L
Sbjct:   15 SECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVL 112

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.380e-15
Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 3

Query:   12 CLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSA 281
            CL+A IVALNE CDG  W+ STK+LQLAS++FC ACR+  T  L  D   P+ +      P   H ++L   RVP LR R V W +PT+A
Sbjct:   51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPP-HPKRLCWTRVPRLRSRRVTWNMPTAA 139

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JF56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF56_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.710e-14
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 3

Query:    6 SRCLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRS-PRVPCLRFRMVAWYLPTSALADARDRFTGLKKLTLVGDLDTRVDK 359
            +RCLDAF+VALN++CDG +W+ S   LQLAS+ FC ACR+V    L  D  TP  +W    GP T   E L +  RVP +R R V W L  +   D     + L+++T   D + R+D+
Sbjct:   34 NRCLDAFVVALNQSCDGKKWYTSIAGLQLASLAFCVACRNVLAPCLTVDKGTPLRLWC---GPCTTPLEVLTTVTRVPAIRVREVVWKL--TERKDGIALPSSLRRITFGRDFNQRIDR 147

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BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.510e-14
Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = 3

Query:    3 PSRCLDAFIVALNEACDGMRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDV-TGPATRHGEQLRSPRVPCLRFRMVAWYLPTSALADAR-DRFTGLKKLTLVGDLDTRVDKSI-WP 371
            PSRCLDA I+ALN+A  G  W+ ST QLQLAS+E C +CRS+    L     TP  +W    T   TR  ++    RVP +R R V W LP  AL +   D ++ +   +L    D  + + I WP
Sbjct:    9 PSRCLDALIIALNQASGG-EWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWP 133

[Close]

BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.540e-14
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 3

Query:    6 SRCLDAFIVALNEACDG--MRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIW---TDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSALAD--ARDRFTGLKKLTLVGD--LDTRVDKSIWPRG 377
            +RCLDAF++AL++AC+G   RW+AST +LQL S++ C ACR+     +  D  TP+ +W   T  T P TR      S RVP +R   + W L   AL    A + +T  ++L L+G   + +   + +WPRG
Sbjct:    9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRG 141

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFC0_9PHAE	3.170e-19	44.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0Z9_ECTSI	1.540e-18	59.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FXS2_ECTSI	6.060e-17	40.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G241_ECTSI	3.220e-16	39.85	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JUA5_9PHAE	1.460e-15	40.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLV1_9PHAE	4.180e-15	47.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRF9_9PHAE	4.380e-15	48.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JF56_9PHAE	1.710e-14	42.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FT95_ECTSI	2.510e-14	40.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LIJ3_9PHAE	2.540e-14	38.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12745	contig	S-dermatodea_contig12745:3197..6108 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	1
Model size	2912
Cds size	1815
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12745.1680.1	prot_S-dermatodea_contig12745.1680.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig12745 3253..5067 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924260.080088-UTR-S-dermatodea_contig12745:3196..3252	1622924260.080088-UTR-S-dermatodea_contig12745:3196..3252	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig12745 3197..3252 +
1694079132.1861713-UTR-S-dermatodea_contig12745:3196..3252	1694079132.1861713-UTR-S-dermatodea_contig12745:3196..3252	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig12745 3197..3252 +
1622924260.1056087-UTR-S-dermatodea_contig12745:5067..6108	1622924260.1056087-UTR-S-dermatodea_contig12745:5067..6108	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig12745 5068..6108 +
1694079132.2080064-UTR-S-dermatodea_contig12745:5067..6108	1694079132.2080064-UTR-S-dermatodea_contig12745:5067..6108	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig12745 5068..6108 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924260.0918896-CDS-S-dermatodea_contig12745:3252..5067	1622924260.0918896-CDS-S-dermatodea_contig12745:3252..5067	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12745 3253..5067 +
1694079132.1972868-CDS-S-dermatodea_contig12745:3252..5067	1694079132.1972868-CDS-S-dermatodea_contig12745:3252..5067	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig12745 3253..5067 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig12745:3197..6108+
coding sequence from alignment at S-dermatodea_contig12745:3197..6108+

protein sequence of mRNA_S-dermatodea_contig12745.1680.1

>prot_S-dermatodea_contig12745.1680.1 ID=prot_S-dermatodea_contig12745.1680.1|Name=mRNA_S-dermatodea_contig12745.1680.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=605bp
MRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRH
GEQLRSPRVPCLRFRMVAWYLPTSALADARDRFTGLKKLTLVGDLDTRVD
KSIWPRGLQQLTFGAEFNQPIEDVAWPFSLLHLTFGATFNQPIGRAAWPP
NLQVLRFGLAFNQPIEHLAWPCSLLQLAFPGKFNQPVENVAWPCSLQLLK
FGMNFDQPIDGVTWPASLQQLKFGYCFNQPIDGVTWPASLQQVHLGEYFN
QPIDGVTWPASLQQVHLGHYFNQPIDGVTWSASLQYLKFGDRFNYPIEGI
TWSASLQHLEFGYHFNQPIEGVTWPASLQRLKFGYHFKYPIKGVMWPASL
QRLKFGFHFNYPIDGVTWPASLQQLEFGYVFNQPIDGVTWSSSLQRMEFG
LRFNQPIDGVTWPASLQQLKFGFRFNQPIDGVTWPASFQHLEFGHQFNHP
IDGVTWPALLQYVEFGYCFNQPIYGVTWPASLQQLKFGYRFNQLTDGVTW
PASLQQLDFGGSFNQPIDGVTWPASLQQVHFGEYFNQPIDGVTWSASLQQ
LKFGDHFNYPIDGVTWPASLQRLEFGREFNQPMDDVAWPALLARVRVGED
LIIL*

mRNA from alignment at S-dermatodea_contig12745:3197..6108+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig12745.1680.1 ID=mRNA_S-dermatodea_contig12745.1680.1|Name=mRNA_S-dermatodea_contig12745.1680.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2912bp|location=Sequence derived from alignment at S-dermatodea_contig12745:3197..6108+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTCCCAGTCGATGCCTGGACGCATTCATCGTCGCCCTCAACGAGGCCTGC
GACGGGATGAGATGGTTCGCGTCAACTAAACAACTGCAGCTTGCGTCCGT
GGAGTTCTGCGGGGCCTGCCGAAGCGTACCTACGTTTTCCCTGCGTGCAG
ACGTTAACACACCAAAGCATATATGGACGGATGTAACCGGGCCGGCCACT
CGCCACGGGGAGCAGCTGCGTTCGCCTCGCGTGCCCTGCCTTCGTTTTCG
CATGGTGGCGTGGTATTTGCCTACTTCGGCGCTGGCAGATGCGAGAGATC
GTTTCACGGGCCTGAAGAAGCTAACATTGGTTGGCGACCTGGATACCCGG
GTAGACAAAAGTATATGGCCGCGTGGGCTGCAGCAGCTTACCTTTGGGGC
AGAATTCAACCAGCCGATCGAAGACGTCGCTTGGCCATTTTCGCTGCTGC
ACCTGACCTTTGGGGCAACATTCAACCAGCCAATTGGGAGAGCTGCGTGG
CCTCCGAACCTGCAGGTGCTTCGCTTTGGGCTCGCCTTTAACCAGCCGAT
CGAACACCTCGCTTGGCCGTGTTCTCTGCTGCAGCTTGCCTTTCCGGGAA
AATTTAACCAGCCGGTTGAAAATGTCGCTTGGCCATGTTCGCTGCAGCTC
CTGAAGTTTGGTATGAATTTCGACCAGCCCATCGACGGTGTGACGTGGCC
GGCGTCGCTTCAGCAGCTCAAGTTCGGCTATTGCTTCAACCAGCCGATCG
ACGGTGTAACGTGGCCGGCATCACTTCAGCAGGTTCATTTAGGGGAATAC
TTCAACCAGCCGATCGACGGTGTAACGTGGCCGGCATCACTTCAGCAGGT
TCATTTAGGGCATTACTTCAACCAGCCAATCGACGGTGTAACGTGGTCGG
CATCGCTTCAATATTTGAAGTTCGGCGACCGCTTCAACTATCCGATCGAA
GGTATAACGTGGTCGGCGTCGCTTCAGCACCTGGAGTTCGGCTACCACTT
CAACCAGCCGATCGAAGGTGTAACTTGGCCGGCGTCGCTTCAGCGGCTGA
AGTTCGGGTACCACTTCAAGTATCCGATCAAAGGTGTAATGTGGCCGGCG
TCGCTTCAGCGGCTGAAGTTCGGCTTCCACTTCAACTATCCGATCGACGG
TGTAACGTGGCCGGCGTCGCTTCAGCAGCTAGAGTTCGGCTACGTCTTCA
ACCAGCCGATCGACGGTGTAACCTGGTCGTCGTCGCTTCAACGGATGGAG
TTCGGCTTACGCTTCAACCAGCCGATCGACGGTGTAACGTGGCCGGCGTC
GCTTCAGCAGCTCAAGTTCGGCTTCCGCTTCAACCAGCCGATCGACGGTG
TAACGTGGCCGGCGTCGTTTCAGCACCTGGAGTTCGGCCACCAGTTCAAC
CATCCGATCGACGGTGTAACGTGGCCGGCGTTGCTTCAGTACGTGGAATT
CGGCTATTGCTTCAACCAGCCGATCTACGGTGTAACGTGGCCGGCGTCGC
TTCAGCAGCTCAAGTTCGGCTACCGCTTCAACCAACTGACCGACGGTGTA
ACGTGGCCGGCGTCGCTTCAACAGCTTGACTTTGGCGGAAGCTTTAACCA
GCCGATCGACGGTGTAACGTGGCCGGCATCCCTTCAGCAGGTTCATTTTG
GGGAATACTTCAACCAGCCAATCGACGGTGTAACGTGGTCGGCATCGCTT
CAACAGCTGAAGTTCGGCGACCACTTCAACTATCCGATCGACGGTGTAAC
GTGGCCGGCGTCACTTCAACGTCTGGAGTTCGGCAGGGAGTTCAACCAGC
CGATGGACGACGTGGCATGGCCGGCACTGCTGGCACGCGTTAGGGTTGGT
GAAGATTTAATTATTCTCTAAAATATCTAGGCTCTAAGGCATACATATAC
GAACTGGTGAAGTCCCCTCCTGGGAACTTGACCTGTTTGTATATTCACAT
CCGTGTGACACCGCGGCGTCCACGACACAGGCGTATCATACAGCTGTCCA
GGTAATGCTTTGGCTAGGCTTTCGTTTCGACAATACGGGAATTACTCTTC
GGTCGTGTGATACAAGGACAAAAACATACAGCAATTTGACGCTTCACTGA
GTGGAGGGTCACAGCGAACGGCGCGAGCGGGAAAGGGTAAGAGTCTGAAA
CGTAACCGGTCCCTGTCTTAGTAGCCATCGTAGTGCAATCAGAGAATATT
TGTGTCACCATCACCTACCGAACGACCGCTTGAGCGCACAGGTGGCGGCG
CTCGTTCACGCGTGTATTTCACGTTAAACATTGTGAGCATGTCGGGTTCT
GAATGTAGCGGATTCCTTACCGCTGTGCCGCGAGCACCCAATGACTGCTG
CCTACTAATTATGCATCCGAATGTTTTGCTCGTTATCGGGCTGTAGAGGG
AGAATTCGGGGCAGTCCCCCTCGACACATGCCGACTTATTATGCTTCCAA
ATGTTTTGCTCGTTGTCGGGCTTTATAGGGGAAATTCGGGCTTGCATTAG
TTTACGCTTGCGTTTCGCCAAGAGCGCTCTGCGTGGGCTAGCGATGTATT
TCCTTGTTGTGATGCTGCAAGGGAAGTTGCCTGGCCGGGCTGATCGTCGG
GAGCGTGCTCTTTGATTAATTTCAGTAGTTCGCGGCCTTGGATTGTGCCC
CGGATTGTGGCGGTGGGATATGATTAGACGTAGATATGATGATGGATGCT
GCTGTATTTATGTGTCCTTTGGCGGTGCGAGCAGCATTTCGGATAGTACC
GTAATTAGTTATGTTTCTGTAGCTTAGCATTGCCTACCCATTGTATGATA
TAGTAGAGTGATGTCAGGCAACACCTCTCAGGCAGAAATCCTGTAGCTCG
TGCTTGTAGCACTTCATACAATAGCACATGCATCCTTATTAATTAATACA
AGAGTCAACCAT

Coding sequence (CDS) from alignment at S-dermatodea_contig12745:3197..6108+

>mRNA_S-dermatodea_contig12745.1680.1 ID=mRNA_S-dermatodea_contig12745.1680.1|Name=mRNA_S-dermatodea_contig12745.1680.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3630bp|location=Sequence derived from alignment at S-dermatodea_contig12745:3197..6108+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGATGGTTCGCGTCAACTAAACAACTGCAGCTTGCGTCCGTGGAGTT
CTGCGGGGCCTGCCGAAGCGTACCTACGTTTTCCCTGCGTGCAGACGTTA
ACACACCAAAGCATATATGGACGGATGTAACCGGGCCGGCCACTCGCCAC
GGGGAGCAGCTGCGTTCGCCTCGCGTGCCCTGCCTTCGTTTTCGCATGGT
GGCGTGGTATTTGCCTACTTCGGCGCTGGCAGATGCGAGAGATCGTTTCA
CGGGCCTGAAGAAGCTAACATTGGTTGGCGACCTGGATACCCGGGTAGAC
AAAAGTATATGGCCGCGTGGGCTGCAGCAGCTTACCTTTGGGGCAGAATT
CAACCAGCCGATCGAAGACGTCGCTTGGCCATTTTCGCTGCTGCACCTGA
CCTTTGGGGCAACATTCAACCAGCCAATTGGGAGAGCTGCGTGGCCTCCG
AACCTGCAGGTGCTTCGCTTTGGGCTCGCCTTTAACCAGCCGATCGAACA
CCTCGCTTGGCCGTGTTCTCTGCTGCAGCTTGCCTTTCCGGGAAAATTTA
ACCAGCCGGTTGAAAATGTCGCTTGGCCATGTTCGCTGCAGCTCCTGAAG
TTTGGTATGAATTTCGACCAGCCCATCGACGGTGTGACGTGGCCGGCGTC
GCTTCAGCAGCTCAAGTTCGGCTATTGCTTCAACCAGCCGATCGACGGTG
TAACGTGGCCGGCATCACTTCAGCAGGTTCATTTAGGGGAATACTTCAAC
CAGCCGATCGACGGTGTAACGTGGCCGGCATCACTTCAGCAGGTTCATTT
AGGGCATTACTTCAACCAGCCAATCGACGGTGTAACGTGGTCGGCATCGC
TTCAATATTTGAAGTTCGGCGACCGCTTCAACTATCCGATCGAAGGTATA
ACGTGGTCGGCGTCGCTTCAGCACCTGGAGTTCGGCTACCACTTCAACCA
GCCGATCGAAGGTGTAACTTGGCCGGCGTCGCTTCAGCGGCTGAAGTTCG
GGTACCACTTCAAGTATCCGATCAAAGGTGTAATGTGGCCGGCGTCGCTT
CAGCGGCTGAAGTTCGGCTTCCACTTCAACTATCCGATCGACGGTGTAAC
GTGGCCGGCGTCGCTTCAGCAGCTAGAGTTCGGCTACGTCTTCAACCAGC
CGATCGACGGTGTAACCTGGTCGTCGTCGCTTCAACGGATGGAGTTCGGC
TTACGCTTCAACCAGCCGATCGACGGTGTAACGTGGCCGGCGTCGCTTCA
GCAGCTCAAGTTCGGCTTCCGCTTCAACCAGCCGATCGACGGTGTAACGT
GGCCGGCGTCGTTTCAGCACCTGGAGTTCGGCCACCAGTTCAACCATCCG
ATCGACGGTGTAACGTGGCCGGCGTTGCTTCAGTACGTGGAATTCGGCTA
TTGCTTCAACCAGCCGATCTACGGTGTAACGTGGCCGGCGTCGCTTCAGC
AGCTCAAGTTCGGCTACCGCTTCAACCAACTGACCGACGGTGTAACGTGG
CCGGCGTCGCTTCAACAGCTTGACTTTGGCGGAAGCTTTAACCAGCCGAT
CGACGGTGTAACGTGGCCGGCATCCCTTCAGCAGGTTCATTTTGGGGAAT
ACTTCAACCAGCCAATCGACGGTGTAACGTGGTCGGCATCGCTTCAACAG
CTGAAGTTCGGCGACCACTTCAACTATCCGATCGACGGTGTAACGTGGCC
GGCGTCACTTCAACGTCTGGAGTTCGGCAGGGAGTTCAACCAGCCGATGG
ACGACGTGGCATGGCCGGCACTGCTGGCACGCGTTAGGGTTGGTGAAGAT
TTAATTATTCTCTAAATGAGATGGTTCGCGTCAACTAAACAACTGCAGCT
TGCGTCCGTGGAGTTCTGCGGGGCCTGCCGAAGCGTACCTACGTTTTCCC
TGCGTGCAGACGTTAACACACCAAAGCATATATGGACGGATGTAACCGGG
CCGGCCACTCGCCACGGGGAGCAGCTGCGTTCGCCTCGCGTGCCCTGCCT
TCGTTTTCGCATGGTGGCGTGGTATTTGCCTACTTCGGCGCTGGCAGATG
CGAGAGATCGTTTCACGGGCCTGAAGAAGCTAACATTGGTTGGCGACCTG
GATACCCGGGTAGACAAAAGTATATGGCCGCGTGGGCTGCAGCAGCTTAC
CTTTGGGGCAGAATTCAACCAGCCGATCGAAGACGTCGCTTGGCCATTTT
CGCTGCTGCACCTGACCTTTGGGGCAACATTCAACCAGCCAATTGGGAGA
GCTGCGTGGCCTCCGAACCTGCAGGTGCTTCGCTTTGGGCTCGCCTTTAA
CCAGCCGATCGAACACCTCGCTTGGCCGTGTTCTCTGCTGCAGCTTGCCT
TTCCGGGAAAATTTAACCAGCCGGTTGAAAATGTCGCTTGGCCATGTTCG
CTGCAGCTCCTGAAGTTTGGTATGAATTTCGACCAGCCCATCGACGGTGT
GACGTGGCCGGCGTCGCTTCAGCAGCTCAAGTTCGGCTATTGCTTCAACC
AGCCGATCGACGGTGTAACGTGGCCGGCATCACTTCAGCAGGTTCATTTA
GGGGAATACTTCAACCAGCCGATCGACGGTGTAACGTGGCCGGCATCACT
TCAGCAGGTTCATTTAGGGCATTACTTCAACCAGCCAATCGACGGTGTAA
CGTGGTCGGCATCGCTTCAATATTTGAAGTTCGGCGACCGCTTCAACTAT
CCGATCGAAGGTATAACGTGGTCGGCGTCGCTTCAGCACCTGGAGTTCGG
CTACCACTTCAACCAGCCGATCGAAGGTGTAACTTGGCCGGCGTCGCTTC
AGCGGCTGAAGTTCGGGTACCACTTCAAGTATCCGATCAAAGGTGTAATG
TGGCCGGCGTCGCTTCAGCGGCTGAAGTTCGGCTTCCACTTCAACTATCC
GATCGACGGTGTAACGTGGCCGGCGTCGCTTCAGCAGCTAGAGTTCGGCT
ACGTCTTCAACCAGCCGATCGACGGTGTAACCTGGTCGTCGTCGCTTCAA
CGGATGGAGTTCGGCTTACGCTTCAACCAGCCGATCGACGGTGTAACGTG
GCCGGCGTCGCTTCAGCAGCTCAAGTTCGGCTTCCGCTTCAACCAGCCGA
TCGACGGTGTAACGTGGCCGGCGTCGTTTCAGCACCTGGAGTTCGGCCAC
CAGTTCAACCATCCGATCGACGGTGTAACGTGGCCGGCGTTGCTTCAGTA
CGTGGAATTCGGCTATTGCTTCAACCAGCCGATCTACGGTGTAACGTGGC
CGGCGTCGCTTCAGCAGCTCAAGTTCGGCTACCGCTTCAACCAACTGACC
GACGGTGTAACGTGGCCGGCGTCGCTTCAACAGCTTGACTTTGGCGGAAG
CTTTAACCAGCCGATCGACGGTGTAACGTGGCCGGCATCCCTTCAGCAGG
TTCATTTTGGGGAATACTTCAACCAGCCAATCGACGGTGTAACGTGGTCG
GCATCGCTTCAACAGCTGAAGTTCGGCGACCACTTCAACTATCCGATCGA
CGGTGTAACGTGGCCGGCGTCACTTCAACGTCTGGAGTTCGGCAGGGAGT
TCAACCAGCCGATGGACGACGTGGCATGGCCGGCACTGCTGGCACGCGTT
AGGGTTGGTGAAGATTTAATTATTCTCTAA