prot_S-dermatodea_contig12745.1680.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12745.1680.1
Unique Nameprot_S-dermatodea_contig12745.1680.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length605
Homology
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D8LSQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ7_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 3.300e-11
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 0
Query:    6 STKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQL-RSPRVPCLRFRMVAWYLPTSALADARD--RFTGLKKLTLVG 93
            ST  LQLAS++FC ACRS  T  LR D +TP+H+W   +GP  R   ++ R+ RVP L  R V W LP S L    D  + + L+ L+ VG
Sbjct:    2 STTALQLASLQFCVACRSASTVRLRIDTDTPRHLWAKDSGPQARRSARVCRASRVPALHAREVLWILPASMLNATSDSLKLSNLQLLSFVG 92          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 7.190e-10
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRH 50
            RW+AST +LQL S+EFCGACR VPT  +R D  TP+ +W+  T P T H
Sbjct:   59 RWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAH 107          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.290e-9
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    3 WFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSA-LADARDRFTGLKKLTLVGDLDTRVDKSIWPR 106
            W+ STK+LQLAS+EFC ACR+  T  L  DV  P+ +     GP  +H ++L   RVP LR R V W +PT+A L         L  L      +  ++   WPR
Sbjct:   53 WYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPP-QHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPR 156          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.210e-9
Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    3 WFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSA-LADARDRFTGLKKLTLVGDLDTRVDKSIWPR 106
            W+ STK+ QLAS+EFC ACR+  T  L+ D  TP+ +      P   H ++L   RVP LR R V W +PT+A L ++         L  V   +  ++   WPR
Sbjct:   29 WYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPP-HPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPR 132          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 6.420e-9
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    3 WFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWT-DVTGPATR---HGEQLR--SPRVPCLRFRMVAWYLPTSALADARDRFTGLK----KLTLVGD-LDTRVDKSIWPRG 107
            W+ ST+QLQL+S+ FC ACRSVPT  L+ D +TP  +++ D    A R   HG   R  + RVP LR R V W L     +    R TG+     +L ++GD ++  +D+++W  G
Sbjct:   47 WYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQL-----SGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDG 157          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 6.680e-9
Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPAT---RHGEQLRSPRVPCLRFRMVAWYLPTSAL 76
            RW+AST +LQL S+EFCGACR VPT  +R D  TP+ +W+     AT   R  E   S RVP ++   + W L    L
Sbjct:   35 RWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVL 112          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.990e-9
Identity = 40/96 (41.67%), Postives = 50/96 (52.08%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSP---------RVPCLRFRMVAWYLPTSALADA-RDRFTGLK 87
            +W+ ST QLQLASVEFC ACRSV T  L  +  TP+H+W D     +                  RVP  R R V W LP S L++A +D F  L+
Sbjct:   12 QWYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLE 107          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.160e-9
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPT-SALADARDR-FTGLKKLTLVGDLDT-RVDKSIWPRG 107
            RW+ ST QLQLAS+EFCGACRS P   +  D  TP  +W+   G A        S RVP ++   + W  PT S L  A    +T L+ L L   L T  +D  +WP+G
Sbjct:   27 RWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS--LGQANPTAGT--STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQG 131          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.400e-8
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRHGEQLRSPRVPCLRFRMVAWYLPTSALADARDRFTGLKKLTLV---GDLDTRVDKSIWP 105
            RW+ STK+LQLAS+EFC ACR      L+ D  TP+++   V  P        R+ RVP LR R V W +PT+   + R     LK +  +   G  +  ++  +WP
Sbjct:   33 RWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRT-RVPRLRARRVKWNMPTAT--ELRTLMFALKDVNCLRFGGVFNGSLEAVVWP 136          
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.610e-8
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
Query:    2 RWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTG--PATRHGEQLRS------PRVPCLRFRMVAWYLPTSAL--ADARDRFTGLKKLTLVGDL 95
            RWF ST  +QLAS+EFC A RS+PT +L  D   P+ +W       P++  G ++R        RVP +R   + W L    L  + A + +TGLK L L GD+
Sbjct:    4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDV 107          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12745.1680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSQ7_ECTSI3.300e-1145.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Z9_ECTSI7.190e-1057.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ4_9PHAE4.290e-939.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE5.210e-937.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFC0_9PHAE6.420e-938.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLV1_9PHAE6.680e-944.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG83_9PHAE6.990e-941.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE8.160e-941.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE1.400e-836.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL88_9PHAE1.610e-838.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 189..595
e-value: 7.2E-8
score: 33.2
IPR008615FNIPPFAMPF05725FNIPcoord: 315..356
e-value: 5.6E-7
score: 29.6
coord: 139..180
e-value: 9.7E-5
score: 22.5
coord: 271..313
e-value: 1.7E-5
score: 24.9
coord: 469..511
e-value: 3.7E-5
score: 23.8
coord: 425..468
e-value: 8.5E-5
score: 22.6
coord: 183..226
e-value: 8.0E-6
score: 25.9
coord: 535..576
e-value: 9.9E-6
score: 25.6
coord: 381..422
e-value: 1.4E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 101..183
coord: 236..338
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 369..471
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 393..494
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 149..251
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 338..427
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 501..581
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 434..537
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 501..581
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 434..537
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 369..471
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 101..183
coord: 236..338
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 338..427
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 393..494
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 149..251
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 190..509

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12745contigS-dermatodea_contig12745:3253..5067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12745.1680.1mRNA_S-dermatodea_contig12745.1680.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12745 3197..6108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12745.1680.1 ID=prot_S-dermatodea_contig12745.1680.1|Name=mRNA_S-dermatodea_contig12745.1680.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=605bp
MRWFASTKQLQLASVEFCGACRSVPTFSLRADVNTPKHIWTDVTGPATRH
GEQLRSPRVPCLRFRMVAWYLPTSALADARDRFTGLKKLTLVGDLDTRVD
KSIWPRGLQQLTFGAEFNQPIEDVAWPFSLLHLTFGATFNQPIGRAAWPP
NLQVLRFGLAFNQPIEHLAWPCSLLQLAFPGKFNQPVENVAWPCSLQLLK
FGMNFDQPIDGVTWPASLQQLKFGYCFNQPIDGVTWPASLQQVHLGEYFN
QPIDGVTWPASLQQVHLGHYFNQPIDGVTWSASLQYLKFGDRFNYPIEGI
TWSASLQHLEFGYHFNQPIEGVTWPASLQRLKFGYHFKYPIKGVMWPASL
QRLKFGFHFNYPIDGVTWPASLQQLEFGYVFNQPIDGVTWSSSLQRMEFG
LRFNQPIDGVTWPASLQQLKFGFRFNQPIDGVTWPASFQHLEFGHQFNHP
IDGVTWPALLQYVEFGYCFNQPIYGVTWPASLQQLKFGYRFNQLTDGVTW
PASLQQLDFGGSFNQPIDGVTWPASLQQVHFGEYFNQPIDGVTWSASLQQ
LKFGDHFNYPIDGVTWPASLQRLEFGREFNQPMDDVAWPALLARVRVGED
LIIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP