prot_S-dermatodea_contig8625.16772.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8625.16772.1
Unique Nameprot_S-dermatodea_contig8625.16772.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length519
Homology
BLAST of mRNA_S-dermatodea_contig8625.16772.1 vs. uniprot
Match: D8LJ78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ78_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 3.000e-67
Identity = 181/436 (41.51%), Postives = 242/436 (55.50%), Query Frame = 0
Query:   27 ASKKAAQKLTNFRAYLHKSSVAACFVDLLEMTNDGIMTESGLYPSSQYRKSRNLRRGGF------IPPRGSRSPQGPSSGQSMLPDGPVARKSEGSQISPPSKTSRPHRRRPSTAIETHTRSLAE--VPDLPLTSRVPTRFAPRANCVRGGR---GRTSRAGNGLGLEGGLAAGVTALEIQRTHWAEDD-----GDWT-----------QGAVVRADDVTACPEINQSRPETE-------------GDGVLAR-RTTKASQWGTCGVPTP---KAAWGEATKGLSTTVSNVALTKSALHKAKELPHESDGRMAKASRVRNKLIEGERRRAEEVLVKNDNRKQAALGAAALEASQRGLMEAIMVVIATKRIWTAFSKLSAQYIEETSRTRAAQVIQRAYKAHSSRRVFKVLLSIRRLHVKLHIGICIRRKRLATTKI 418
            A+KKAAQKLTNFR YLHKSSVA CFVDLL+MT++G+MTE+GLYPSS+Y++SRN+R+ G        PP G   P      Q+ L  GP   ++E  + +        H RRPSTA+ETH+  LA     D PL++RV            G R     +    N    E    +  T L+I+RT W E       G W            QG +V A   T  PE N    E E             GD    R  T+  +   T   P P   + AWG+A + LS++V+ VA  K+A  +A  + + S  R A+A+ VR  LIEGE  RA+  L KN+NRK+ A  AAAL ASQRGL+EAI +V+ATKR+W    KLS           AA V+QRAYKA+++RR+FKVLL+IRR+H++L+IG+ IRRK++  + +
Sbjct:   15 ATKKAAQKLTNFRGYLHKSSVAGCFVDLLQMTDEGVMTEAGLYPSSRYKQSRNMRQSGLGTSSRSRPPTGLNGPNKNDKSQAPL-QGPSNNQAEDQRKNQRQPRGH-HGRRPSTALETHSAPLAAQLTRDAPLSARVGLSAGNSFAEAAGSRILSASSPSCHNNNKSEDIAGSRATILDIRRTQWVEGGSKQGVGGWLEADTAGQSQQHQGQLVGAVSATG-PETNDDAEEGEKEGRNGGGHDENGGDHPGGRCNTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRA--MINSSHDRRARAASVRAGLIEGELLRAQAALAKNENRKRRATEAAALAASQRGLLEAISLVVATKRLWAGSLKLSQDREHLVHLGIAATVVQRAYKAYTNRRMFKVLLAIRRVHLRLYIGMNIRRKQMVRSAV 445          
BLAST of mRNA_S-dermatodea_contig8625.16772.1 vs. uniprot
Match: A0A6H5JCP1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP1_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.130e-51
Identity = 89/126 (70.63%), Postives = 113/126 (89.68%), Query Frame = 0
Query:  388 VFKVLLSIRRLHVKLHIGICIRRKRLATTKIRWFLATGSGGAKARPRMVMRAFMYHVRRCQRAAKDWLACRAASIEAIGYLWERVEAETRRALGNELDRAKRVWMKRTLQTGQDSQMHGQWRELKV 513
            +FKVLLSIRR+H++L++G+ IRRK++A TK++WFLATGSGG KARPR V+RAFMY VRRCQRAA++WLACRAA+IEA+  LW+R+E+E RR LG+ELDRAKRVW+K  L+TG+DS +HGQWRELK 
Sbjct:    1 MFKVLLSIRRVHLRLYMGMNIRRKQMAVTKMQWFLATGSGGPKARPRKVIRAFMYQVRRCQRAAREWLACRAATIEAVCRLWDRIESEIRRGLGDELDRAKRVWVKNALRTGEDSHIHGQWRELKA 126          
BLAST of mRNA_S-dermatodea_contig8625.16772.1 vs. uniprot
Match: A0A6H5JK95_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK95_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.300e-34
Identity = 150/403 (37.22%), Postives = 199/403 (49.38%), Query Frame = 0
Query:   27 ASKKAAQKLTNFRAYLHKSSVAACFVDLLEMTNDGIMTESGLYPSSQYRKSRNLRRGGFIPPRGSRS-PQGPSSGQ-----SMLP-DGPVARKSEGSQISPPSKTSRP----HRRRPSTAIETHTRSLAEVP--DLPLTSRVPTRFAPRANCVRGGR--GRTSRAGNGLGLEGGLAAGVTALEIQRTHWAEDD-----GDWT-----------QGAVVRADDVTACPEINQSRPETEGDGVLAR--------------RTTKASQWGTCGVPTP---KAAWGEATKGLSTTVSNVALTKSALHKAKELPHESDGRMAKASRVRNKLIEGERRRAEEVLVKNDNRKQAALGAAALEASQRGLMEAIMVVIATKRIWTAFSKLSAQYIEETSRTRAAQVIQRAYK 381
            A+KKAAQKL NFR          C       T  G+MTE+GLYPSS+Y++SRN+R+ G      SRS P    +G+     S  P  GP       +Q+   SK  R     H RRPSTA+ET +  LA  P  D PL++RV            G R  G +S   +    E    +  T L+I+RT W E +     G W            QG  V A   T  PE N    E + +G                  +T+  +   T   P P   + AWG+A + LS++V+ VA  K+A  +A  + + S  R A+A+ VR  LIEGE  RA+E L KN+NRK+ A  AAAL ASQRGL+EAI +V+ATKR+W +  KLS    +      AA V+QRAYK
Sbjct:   21 ATKKAAQKLANFR---------GC-----SSTASGVMTEAGLYPSSRYKQSRNMRQSGLGSSSRSRSRPPTRLNGRRKNDKSQAPLQGP-----SNNQVGDQSKNQRQQRGHHGRRPSTALETPSAPLAAQPTRDAPLSARVGLSAGNSFAEAAGARTLGASSPTCDNNKSEDIAGSRATILDIRRTQWVEGESKQGVGGWLEADTAGRSQQHQGQRVGAVSATG-PETNDGAEEGDKEGRNGXXXXXXXXXXXXGRCKTSSTTSTSTADSPKPFSRRVAWGKAMRELSSSVTKVAHMKTAADRA--MINSSHERRARAASVRAGLIEGELLRAQEALAKNENRKRQATEAAALAASQRGLLEAITLVVATKRLWASSLKLSQDREDLAHLGVAATVVQRAYK 401          
BLAST of mRNA_S-dermatodea_contig8625.16772.1 vs. uniprot
Match: D8LJ77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ77_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.990e-14
Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  461 SIEAIGYLWERVEAETRRALGNELDRAKRVWMKRTLQTGQDSQMHGQWRELKVR 514
            SIEA+  LW+R+E+E RR LG+ELDRAKRVWMK  L+TG+DS +HGQWRELK +
Sbjct:   34 SIEAVCRLWDRIESEIRRGLGDELDRAKRVWMKNALRTGEDSHIHGQWRELKAK 87          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8625.16772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ78_ECTSI3.000e-6741.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCP1_9PHAE1.130e-5170.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JK95_9PHAE3.300e-3437.22Reverse transcriptase domain-containing protein n=... [more]
D8LJ77_ECTSI2.990e-1468.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 369..397
score: 7.272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8625contigS-dermatodea_contig8625:589..6829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8625.16772.1mRNA_S-dermatodea_contig8625.16772.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8625 589..6829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8625.16772.1 ID=prot_S-dermatodea_contig8625.16772.1|Name=mRNA_S-dermatodea_contig8625.16772.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=519bp
QVQLTLRSLNGPEVNAGTTRGAEAPAASKKAAQKLTNFRAYLHKSSVAAC
FVDLLEMTNDGIMTESGLYPSSQYRKSRNLRRGGFIPPRGSRSPQGPSSG
QSMLPDGPVARKSEGSQISPPSKTSRPHRRRPSTAIETHTRSLAEVPDLP
LTSRVPTRFAPRANCVRGGRGRTSRAGNGLGLEGGLAAGVTALEIQRTHW
AEDDGDWTQGAVVRADDVTACPEINQSRPETEGDGVLARRTTKASQWGTC
GVPTPKAAWGEATKGLSTTVSNVALTKSALHKAKELPHESDGRMAKASRV
RNKLIEGERRRAEEVLVKNDNRKQAALGAAALEASQRGLMEAIMVVIATK
RIWTAFSKLSAQYIEETSRTRAAQVIQRAYKAHSSRRVFKVLLSIRRLHV
KLHIGICIRRKRLATTKIRWFLATGSGGAKARPRMVMRAFMYHVRRCQRA
AKDWLACRAASIEAIGYLWERVEAETRRALGNELDRAKRVWMKRTLQTGQ
DSQMHGQWRELKVRNLPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS