prot_S-dermatodea_contig86237.16770.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig86237.16770.1
Unique Nameprot_S-dermatodea_contig86237.16770.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length80
Homology
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BLAST of mRNA_S-dermatodea_contig86237.16770.1 vs. uniprot
Match: A0A6H5JRI0_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI0_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 4.080e-39
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0 
Query:    1 MLSAFHLFHHYQWCGSVASFKFPPGKLPAVCLACLLAATKAEDCNAKLDTLLQQMRALEPILPPLEGIFPLGQRPMPKEV 80
            ML+AFHLFHHYQWCGSV+SFKF P KLPAVCLACLLAATKAEDCNAKL+ +LQQM+ LEPILPPLEGIFPLGQRP  KEV
Sbjct:  405 MLTAFHLFHHYQWCGSVSSFKFSPPKLPAVCLACLLAATKAEDCNAKLEVMLQQMKQLEPILPPLEGIFPLGQRPTSKEV 484
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BLAST of mRNA_S-dermatodea_contig86237.16770.1 vs. uniprot
Match: D7FYQ1_ECTSI (CID domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ1_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 4.870e-38
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0 
Query:    1 MLSAFHLFHHYQWCGSVASFKFPPGKLPAVCLACLLAATKAEDCNAKLDTLLQQMRALEPILPPLEGIFPLGQRPMPKEV 80
            ML+AFHLFHHYQWCG V+SFKF P KLPAVCLACLLAATKAEDCNAKL+ +L QMR LEPILPPLEGIFPLGQRP  KEV
Sbjct:  401 MLTAFHLFHHYQWCGLVSSFKFSPPKLPAVCLACLLAATKAEDCNAKLEVMLHQMRQLEPILPPLEGIFPLGQRPTSKEV 480
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BLAST of mRNA_S-dermatodea_contig86237.16770.1 vs. uniprot
Match: A0A836CAK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 9.660e-9
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:    1 MLSAFHLFHHYQWCGSVASFKFPPGKLPAVCLACLLAATKAEDCNAKLDTLLQQMRALEPILPP 64
            MLSAFH FHH+ W    A   +P   LPAVCLACL  A KAED   ++D L+     ++  LPP
Sbjct:   24 MLSAFHFFHHFHWVSLDAGQMWPATDLPAVCLACLHLAGKAEDTAFRIDYLMDIADQMKMALPP 87
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig86237.16770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRI0_9PHAE4.080e-3986.25CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYQ1_ECTSI4.870e-3885.00CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CAK0_9STRA9.660e-948.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig86237contigS-dermatodea_contig86237:354..593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig86237.16770.1mRNA_S-dermatodea_contig86237.16770.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig86237 336..593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig86237.16770.1 ID=prot_S-dermatodea_contig86237.16770.1|Name=mRNA_S-dermatodea_contig86237.16770.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=80bp
MLSAFHLFHHYQWCGSVASFKFPPGKLPAVCLACLLAATKAEDCNAKLDT
LLQQMRALEPILPPLEGIFPLGQRPMPKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf