prot_S-dermatodea_contig8614.16764.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE) HSP 1 Score: 270 bits (691), Expect = 3.440e-86 Identity = 152/284 (53.52%), Postives = 201/284 (70.77%), Query Frame = 0
Query: 1 MNTVIEGGKNNKQTTRLQRLQGMTTKETASEVALRA-CFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKG-TVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLLICSCWKPEACRDG--GRRGGARGKGRKTLPEEEQEELGADGEKLAVGPAAVSVAQEVSMEAMKKPFRAMYDERRRLVTPEFMDKYVPKGVTLETLQPVL 280
MNT+IEGG+++K T +LQ+LQGM KE+ASE AL+ F +VRE + LGL ++QE ACLLLR+AED GLFK KK RG A+C AVT +TCR W +TM+++S ++SL+ +NKA K L NL +++ ++RG H IP LC KL +PPF+ +AA+H AQQAS DLV GM P+ VAAAAVLL+CSCW P AC DG RR K RKT ++Q++ +GE V PAAVS A ++ AMK+PFRAMY++R RL T EF+++ K VTLETL+P+L
Sbjct: 80 MNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSLKALNKAVKKL-SNLEIERAPSLRGEHHIPLLCDKLGLPPFVSVAARHAAQQASRWDLVDGMKPSAVAAAAVLLVCSCWNPAACGDGVVDRRSK---KARKT---QQQQQAAVEGETWDVRPAAVSEAGGTTVMAMKRPFRAMYEQRGRLFTVEFLERRAAKEVTLETLKPIL 356
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A520K3T5_9EURY (Transcription initiation factor IIB n=1 Tax=Methanophagales archaeon ANME-1-THS TaxID=2491082 RepID=A0A520K3T5_9EURY) HSP 1 Score: 85.5 bits (210), Expect = 1.130e-15 Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 0
Query: 18 QRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLLICS 186
+R+ G+ + ++ SE L + +A LGLP++I+E A LL R+A L K + + + +AV YITCR +GV RT+++++ + L+ + +A L KNL L TH IP+ C +L + A + ++ + G GP G AAAA+ L +
Sbjct: 84 KRMHGLISMDS-SEKTLSFALGEIDRMASALGLPTNIKEAASLLYRKAVKQNLIKGRSI---EELGSAVLYITCRQYGVPRTLKEVAAVSRMPLKKIRRAYIFLLKNLELRLTPPDPTHYIPRFCSELGLSDATRERAIALMRETRNMAAAKGWGPTGTAAAAIYLAAN 248
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A2V3JLQ8_9EURY (Transcription initiation factor IIB n=2 Tax=Methanomicrobia TaxID=224756 RepID=A0A2V3JLQ8_9EURY) HSP 1 Score: 81.3 bits (199), Expect = 4.040e-14 Identity = 47/168 (27.98%), Postives = 89/168 (52.98%), Query Frame = 0
Query: 16 RLQRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
+L++ Q T +E + + + ++ L LP SI+E A +L R+A L + + + + +A+ YITCR +GV RT+ ++ + +S +++++A + L + L+L +P+ C L + I A + ++ASE +L G GP G+AAAA+ +
Sbjct: 104 KLKKWQQRTHIANTTERSFIFALSEIERMSSALKLPVSIREAASMLYRKAMKKHLIRGRSI---EGITSAILYITCRQYGVPRTLEEVREVSRVSQKEISRAYRFLLRELDLKISPASPIDFVPRFCSMLGLGGDIRAKAIEIIKKASEKELTNGRGPIGIAAAAIYI 268
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A843ECA6_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Methanomethylophilus sp. TaxID=2774294 RepID=A0A843ECA6_9ARCH) HSP 1 Score: 79.3 bits (194), Expect = 1.060e-13 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 0
Query: 24 TTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
T + ++E L + + +A GLP S+++ A L+ R A + L K + + AA Y +CR G+ RT+ ++++ ++ R++ + +HL K L L R I + C L + + A + ++ASE DL+ G+GPAGV AAAV +
Sbjct: 62 TRRTESAERNLAFALSEIDRVATANGLPRSVRDSAGLVYRSAVERNLVKGRPID---VLAAASVYCSCRISGIPRTLDEIAENANIGRRELGRTYRHLSKELGLGLSPARPQDYIGRYCDALKLGTEVRERALSLIRKASENDLLSGLGPAGVTAAAVYI 218
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A662RQX3_9EURY (Transcription initiation factor IIB n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A662RQX3_9EURY) HSP 1 Score: 80.1 bits (196), Expect = 1.090e-13 Identity = 51/183 (27.87%), Postives = 94/183 (51.37%), Query Frame = 0
Query: 1 MNTVIEGGKNNKQTTRLQRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
++TV+ G Q RL++ Q T +E + + + +A L LP +I+E A +L R+A L + + + + +A+ YITCR +GV RT+ ++ + + +++++A + L + LNL +P+ C L + I A + +A+E +L G GP G+AAAA+ +
Sbjct: 94 LSTVVTWGPQG-QGQRLKKWQQRTHIANTTERSFIFALSEIDRMACALRLPVNIREAASMLYRKAMKKRLIRGRSI---EGITSALLYITCRQYGVPRTLEEVREISRVGQKEISRAYRFLLRELNLKISPTSPVDFVPRFCSLLGLGSDIRAKAIEIINKATEAELTNGRGPIGIAAAAIYI 272
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A843DR40_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Methanomethylophilus sp. TaxID=2774294 RepID=A0A843DR40_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 1.090e-13 Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 0
Query: 29 ASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
++E L + + +A GLP S+++ A L+ R A + L K + + AA Y +CR G+ RT+ ++++ ++ R++ + +HL K L L R I + C L + + A + ++ASE DL+ G+GPAGV AAAV +
Sbjct: 11 SAERNLAFALSEIDRVATANGLPRSVRDSAGLVYRSAVERNLVKGRPID---VLAAASVYCSCRISGIPRTLDEIAENANIGRRELGRTYRHLSKELGLGLSPARPQDYIGRYCDALKLGTEVRERALSLIRKASENDLLSGLGPAGVTAAAVYI 162
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A256ZBK9_9ARCH (Transcription initiation factor IIB n=1 Tax=Candidatus Bathyarchaeota archaeon ex4484_231 TaxID=2012512 RepID=A0A256ZBK9_9ARCH) HSP 1 Score: 79.7 bits (195), Expect = 1.500e-13 Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 0
Query: 16 RLQRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAA 180
RL++ Q A E L + + +IA+ L LP SI E A ++ R+A + L + + + + AA YI CR G++RT+ ++SKA ++S R+V ++ + L K L+ V+ + + +L++ + A + AS L L G GP G+AAAA
Sbjct: 109 RLRKWQRRIRVSDAMERNLAFALSEITKIANNLSLPKSIFETASVIYRKAVKERLIRGRSI---QGISAASVYIACRQCGLARTLEEISKASNVSKREVGRSYRFLVKELDYFIPPVKANQYVSKFSNQLTMQGKVEEIANKILTTASNLKLTSGRGPTGIAAAA 270
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A842XII8_9EURY (Transcription initiation factor IIB n=1 Tax=Methanophagales archaeon TaxID=2056316 RepID=A0A842XII8_9EURY) HSP 1 Score: 78.6 bits (192), Expect = 3.220e-13 Identity = 50/166 (30.12%), Postives = 84/166 (50.60%), Query Frame = 0
Query: 18 QRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
+RL+G+ + ++ SE L + +A L LP+ I+E A LL R+A L K + + + +AV YITCR +GV RT++++++ + L+ + +A LFK L + IP+ C +L + A + ++ G GP G AAAA+ L
Sbjct: 84 KRLRGIISMDS-SEKTLAFALGEIDRMASALKLPNDIKEAASLLYRKAVKHNLIKGRSI---EELGSAVLYITCRQYGVPRTLKEIAQVSRMPLKKIRRAYIFLFKKLEIKLAPADPARYIPRFCSELGLSDATRERAIKIMREGRGTAAAKGWGPTGTAAAAIYL 245
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: Q649S4_9ARCH (Transcription initiation factor IIB n=8 Tax=Archaea TaxID=2157 RepID=Q649S4_9ARCH) HSP 1 Score: 78.6 bits (192), Expect = 3.510e-13 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 0
Query: 16 RLQRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
R +RL+G++ +S+ L + +A LGLP++I+E +L R+A GL K + + + +A+ YITCR +GV RT++++++ L+ + +A L + L + IP+ C KL + I A + Q + G GP G AAAA+ +
Sbjct: 89 RTRRLRGISI--DSSDKTLAFALVEIDRMACALGLPNNIKEATSVLYRKAMKRGLIKGRSI---EELVSAMLYITCRQYGVPRTLKEMAEVSRSPLKKIRRAYIFLLRRLEIKLAPADPARYIPRFCSKLGLSAEIREKAMVILQDDDGTGMAKGWGPIGTAAAAIYI 251
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Match: A0A520K523_9EURY (Transcription initiation factor IIB (Fragment) n=1 Tax=Methanophagales archaeon ANME-1-THS TaxID=2491082 RepID=A0A520K523_9EURY) HSP 1 Score: 75.5 bits (184), Expect = 1.280e-12 Identity = 43/168 (25.60%), Postives = 86/168 (51.19%), Query Frame = 0
Query: 16 RLQRLQGMTTKETASEVALRACFARVREIAHGLGLPSSIQEDACLLLRRAEDDGLFKTKKDPRGKAMCAAVTYITCRTWGVSRTMRDLSKAVDLSLRDVNKACKHLFKNLNLDKGTVRGTHLIPQLCGKLSVPPFICIAAQHVAQQASELDLVGGMGPAGVAAAAVLL 183
+L++ Q T +E + + + +A L LP +I+E A +L R+A L + + + + A+ YITCR +GV RT+ ++ + +++++A + L + L+L +P+ C L++ + A + + A++ +L G GP G+AAAA+ +
Sbjct: 10 KLKKWQQRTHIANTTERSFIFALSEIDRMACALKLPMNIREAASMLYRKAMKKRLIRGRSI---EGIATAILYITCRQYGVPRTLEEVRDISRVGQKEISRAYRFLLRELDLKVSPASPVDFVPRFCSLLNLTSDVRAKAIEIIKHAADNELTNGRGPIGIAAAAIYI 174 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8614.16764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig8614.16764.1 ID=prot_S-dermatodea_contig8614.16764.1|Name=mRNA_S-dermatodea_contig8614.16764.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=282bpback to top |