prot_S-dermatodea_contig85922.16750.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig85922.16750.1
Unique Nameprot_S-dermatodea_contig85922.16750.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length53
Homology
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BLAST of mRNA_S-dermatodea_contig85922.16750.1 vs. uniprot
Match: D7FNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNB6_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.350e-22
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 
Query:    1 KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTASPTLVVGSSVGASSAAILGMV 53
            KQGLFQSIGLYSIFGKKLVEHLWLLWELVLT  PTLV+GSSVGASSAAILGMV
Sbjct:  936 KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTGGPTLVLGSSVGASSAAILGMV 988
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BLAST of mRNA_S-dermatodea_contig85922.16750.1 vs. uniprot
Match: A0A6H5KGC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC5_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.350e-22
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0 
Query:    1 KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTASPTLVVGSSVGASSAAILGMV 53
            KQGLFQSIGLYSIFGKKLVEHLWLLWELVLT  PTLV+GSSVGASSAAILGMV
Sbjct: 1117 KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTGGPTLVLGSSVGASSAAILGMV 1169
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BLAST of mRNA_S-dermatodea_contig85922.16750.1 vs. uniprot
Match: A0A835Z9L9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.400e-13
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTASPTLVVGSSVGASSAAILGMV 53
            +QGLFQS+GLYS  G+ L+EHLW +WELV+T +P +VVG +VG+SSA +L MV
Sbjct:  623 RQGLFQSMGLYSACGRGLMEHLWHMWELVITGAPVMVVGPNVGSSSAVVLAMV 675
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85922.16750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNB6_ECTSI3.350e-2294.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGC5_9PHAE3.350e-2294.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9L9_9STRA5.400e-1362.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig85922contigS-dermatodea_contig85922:340..498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig85922.16750.1mRNA_S-dermatodea_contig85922.16750.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig85922 340..498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig85922.16750.1 ID=prot_S-dermatodea_contig85922.16750.1|Name=mRNA_S-dermatodea_contig85922.16750.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=53bp
KQGLFQSIGLYSIFGKKLVEHLWLLWELVLTASPTLVVGSSVGASSAAIL
GMV
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