mRNA_S-dermatodea_contig8587.16745.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 258 bits (659), Expect = 1.740e-75 Identity = 168/396 (42.42%), Postives = 225/396 (56.82%), Query Frame = 3
Query: 453 LARALVTRYTKSTQMTMRL*DTCRTINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLE-SEPVSGRLVVPLIADLRGSWQMEKEELDKIS--AAHAIDPKARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPSVAPSAT--ASRPV---PAARSGAAGIESGARSSSPSQAQAATATPARTTTSLPPDHFLRE-----AEGEVDAYRQVQG---WAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVELLVGLKTPWEVVEAFN 1592
LAR LV RY KS+QM RL C + + L V+QDVETRWWST M RL+YL +AI++HE++D + LL DW VL L+ P+L PF QK LE ++ V+G + + +A+LR + +L ++ KA +A+ P EAL DF NRWGDG++++E REG RRQPQGF+++QV ATALD R LYG+ E GVW+AVA AA DI A SA AS PV PA G G R S+ A A RE + EV A++ G W +++ V++NPL R+ ++PLLAALARR+LAIP+SQ QSERVFS+AG + TR+++ E VELLV L+ W VV+ +
Sbjct: 159 LARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWK 554
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 223 bits (567), Expect = 2.850e-62 Identity = 152/355 (42.82%), Postives = 206/355 (58.03%), Query Frame = 3
Query: 456 ARALVTRYTKSTQMTMRL*DTCRTINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLE-SEPVSGRLVVPLIADLRGSWQMEKEEL---DKISAAHAIDPKARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAA--SAARPSVAPSATASRPV--PAARSGAAGIESGARSSSPSQAQAATATPART-----TTSLPPDHFLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERV 1481
ARA+V RY +S+QM+ RL + + L V+QDVETRWWS+ M ERL+YL +AI++HE+ D I +L DW VL L+ P+L PF QK LE ++ V+G + VP I +LR + +L D+ + A +A +A+LP EAL DF NRWGDG+ ++E REG RRQPQGF+ +QV ATA+D R LYG+ E VW+AVA A DI A S+ + + SA A++PV P G G AR S+ A AA A A + T + + EV +++ G +I G VY++PL W R +FP LAALARR+LAIP+SQ SERV
Sbjct: 196 ARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGIS-ASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.800e-57 Identity = 159/443 (35.89%), Postives = 215/443 (48.53%), Query Frame = 3
Query: 447 MVLARALVTRYTKSTQMTMRL*DTCRTINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLE-SEPVSGRLVVPLIADLRGSWQMEKEELDKISA-AHAIDPKARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPS---------------------------------------------VAPSATASRPVPAARSGAAGIESG------------------ARSSSPSQAQAATATPARTTTSLPPDHFLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVELLVGLK-TPWEV 1577
+ LAR +VTRYT S+Q + RL C + + V+QDVETRWWST RL+ LRR I HE +D P LL+ DW VL+L+ +L+PF QK LE S+ V+ RLV P IADL+ E L S A +I +A+ ++ C +AL+ D RWGD TDV+ EGPRRQP+GF+KEQV+ATAL R+ LYG+ E VW A A A + + A + +S P+P +E A A A+++ R S+ EVDA++ G A+ ++ G V PL W R AR++P LA+LARR+L IPA Q QSERVFSSAG ++ KTR ++ E V L+V L+ TP E+
Sbjct: 122 LALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIP--------VEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESI--------ISREVDAFKITPGLAVS-WEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNTPPEL 547
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.650e-43 Identity = 96/219 (43.84%), Postives = 124/219 (56.62%), Query Frame = 3
Query: 447 MVLARALVTRYTKSTQMTMRL*DTCRTINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLE-SEPVSGRLVVPLIADLRGSWQMEKEELDKISA-AHAIDPKARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADI 1097
+ L R +VTRYT S+Q + RL C + + +V+QDVETRWWST +D IP LL DW VL+L+ P+L PF QK LE S+ V+ LV IADLR E L S A +I +A+ +L C AL+ D RW DGTDV+ EGPRRQP+GF+K+QV+ATALD R+ LYG+ E VW+AVA A +
Sbjct: 110 LALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKV 312
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 152 bits (384), Expect = 8.740e-37 Identity = 126/384 (32.81%), Postives = 180/384 (46.88%), Query Frame = 3
Query: 447 MVLARALVTRYTKSTQMTMRL*DTCRTINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLE-SEPVSGRLVVPLIADLRGSWQMEKEELDKISAAHAIDPKARDALLPCVEALR-VDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPSVAPSATASRPVPAARSGAAGIESGARSSSPSQAQAATATPARTTTSLPPDHFLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVELLVGLKTPWEVVEAFN 1592
+ LAR +VTRY S+Q + RL + + +V+QDVETRWWST RL+ LRR I HE +D IP LL+ DW VL+++ P+ +PF L QK E S+ V+ LV+P IADLR +ELD+ A + A A EA + V F + T V+ +P+GF+K+QV+ATALD R+ LYG+ E VW+AVA A + IE+ A + S +++ P + A V G + +Q ++ R+L IPASQ QSERVFSSAG ++ KTR ++ E VEL++ L+ V+ +N
Sbjct: 166 LALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLR-------DELDE--AVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVA----------------------------IEAKATEDTQSAGASSSLIPVEPAAXXXXXXXXX---XDFAAASAVPG-----------------------DKQQSANASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWN 479
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 123 bits (309), Expect = 6.570e-28 Identity = 96/257 (37.35%), Postives = 131/257 (50.97%), Query Frame = 3
Query: 903 DFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPSVAPSATASRPVPAARSGA---------------------------AGIESGARSSSPSQAQAATATPARTTTSLPPDHFLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVELLVGLKTPWEVVEAFN 1592
DF NRWGDG +++ +EG RRQP GF+ QV+ATALD RT +LYGV +E+ VWK V + A +K A R S +S+ P A GAR+ P + A ++ R TS E+ A++ G + E G+ VY +PL W R FP LA LARR+LAIPA+Q +SER+FS AG+I+ K RN ++ TVELLV L+ W++VE +
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEA--VKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGART--PQLDEGADSSFVRLITSS--------VRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWE 294
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.970e-18 Identity = 54/123 (43.90%), Postives = 80/123 (65.04%), Query Frame = 3
Query: 732 KKLESEPVSGRLVVPLIADLRGSWQMEKEELDKISA-AHAIDPKARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADI 1097
K++ + V+G LVVP I DLR S + ++L ++ + A A A++PC++ALR D+ +RWGDG +++ +EGPRRQP GF+ V+ATALD RT + YGV +E+ VWK V + A I
Sbjct: 191 KRVIQDVVTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKI 313
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 8.990e-18 Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 3
Query: 861 ARDALLPCVEALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAV 1076
AR A++PC++ALR DF NRWGDG +++ +EGPRRQP GF+ QV+ATALD RT +L+GV +E+ VWK V
Sbjct: 158 ARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLV 229
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A409VL32_9AGAR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409VL32_9AGAR) HSP 1 Score: 89.4 bits (220), Expect = 6.330e-15 Identity = 102/372 (27.42%), Postives = 155/372 (41.67%), Query Frame = 3
Query: 525 TINIVSLRVIQDVETRWWSTLCMTERLVYLRRAIE--IHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLESEPVSGRLVVPLIADLRGSWQMEKEELDKISAAHAIDPKARDA----LLP-------------CV--EALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPSVAPSATASRPVPAARSGAAGIESGARSSSPSQAQAAT------ATPARTTTSLPPDH----FLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVEL 1547
T ++ +L V++DV TRW T+ M +R + LR+AIE ET + +L DW L+ + +LEPF K + + S + +P + +W + EL+K +A + + K R+A LL C+ L ++W + + RR + +E V A+ V A E AQ AA T + PVP + +SS PS A + + TP T T PD E E E++ Y QG G PL+W ++NA FP+LA +AR LAIPA+ ERVFS + HI R+ + +ET+ +
Sbjct: 712 TAHLAALMVVRDVATRWNFTVEMGKRGLMLRKAIEKWTFETPECRDMMLSSDDWDTLKKIVDLLEPFLYATKSMST---SSQPTIPFVLP---TWLSLRRELEKAAANNFLPQKIRNAASAGLLKLQKYESLAQRNQHCIIGTVLHPSLRSKWFGNQAPLGASDEERRPYESSAEEIVQHVAM---------VYAEEMREAKAQTAQTAA----------------TENPPVP---------QVLPKSSPPSLAASQSWLASICGTPFTTATPHTPDTPTLTIKEEVEEELNRYFSFQG---------GPAKLEEPLIWWKDNAAAFPILAKMARDFLAIPATSTPVERVFSKSRHICSDLRSSLKAETISM 1034
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Match: A0A409YG47_9AGAR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409YG47_9AGAR) HSP 1 Score: 85.1 bits (209), Expect = 2.170e-14 Identity = 99/366 (27.05%), Postives = 152/366 (41.53%), Query Frame = 3
Query: 549 VIQDVETRWWSTLCMTERLVYLRRAIE--IHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLESEPVSGRLVVPLIADLRGSWQMEKEELDKISAAHAIDPKARDA----LLP-------------CV--EALRVDFENRWGDGTDVMELREGPRRQPQGFRKEQVMATALDARTNMLYGVPANEREGVWKAVAQAAADIKAASAARPSVAPSATASRPVPAARSGAAGIESGARSSSPSQAQAATATPARTTTSLPPDH----FLREAEGEVDAYRQVQGWAIEELQDHGSIVYSNPLVWGRENARQFPLLAALARRLLAIPASQVQSERVFSSAGHIIPKTRNKVSSETVELLVGLKTPW 1571
V++DV TRW T+ M +R + LR+AIE ET + +L DW L + +LEPF L K + + S + +P + +W + EL+K +A + K R+A LL C+ L ++W + + RR + +E V A M+Y E + +A AQ A+ P P +++ + A++S A I TP T T PD E E E+ Y QG G PL+W ++NA FP+LA +AR LAIPA+ ERVFS + HI R+ + +ET+ + + P+
Sbjct: 2 VVRDVATRWNFTVEMGKRGLMLRKAIEKWTFETPECRDMMLSSDDWDTLAKIVDLLEPFLLATKSMST---SSQPTIPFVLP---TWLSLRRELEKAAANSFLPQKIRNAASAGLLKLQKYESLAQKNQHCIIGTVLHPSLRSKWFGNQAPLGASDEERRPYESSAEEIVQHVA------MVYA------EEMKEAKAQTXXXXXTANPPVPQALPKSSSPPSLAASQSWLASI---------------CGTPFTTETPHTPDTPTLTIKEEVEDELKRYFSFQG---------GPAKLEEPLIWWKDNAAAFPILAKMARDFLAIPATSTPVERVFSKSRHICSDLRSSLKAETISMALLSLQPY 325 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8587.16745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8587.16745.1 >prot_S-dermatodea_contig8587.16745.1 ID=prot_S-dermatodea_contig8587.16745.1|Name=mRNA_S-dermatodea_contig8587.16745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=335bp MTERLVYLRRAIEIHETVDGIPSLLEPVDWRVLELLHPVLEPFSLVQKKLback to top mRNA from alignment at S-dermatodea_contig8587:771..2407- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8587.16745.1 ID=mRNA_S-dermatodea_contig8587.16745.1|Name=mRNA_S-dermatodea_contig8587.16745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1637bp|location=Sequence derived from alignment at S-dermatodea_contig8587:771..2407- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8587:771..2407- >mRNA_S-dermatodea_contig8587.16745.1 ID=mRNA_S-dermatodea_contig8587.16745.1|Name=mRNA_S-dermatodea_contig8587.16745.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2010bp|location=Sequence derived from alignment at S-dermatodea_contig8587:771..2407- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |