mRNA_S-dermatodea_contig853.16701.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig853.16701.1
Unique NamemRNA_S-dermatodea_contig853.16701.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 3.000e-67
Identity = 180/301 (59.80%), Postives = 207/301 (68.77%), Query Frame = 1 
Query:  211 LSMACGLLLLAYCSLCGAFLPPPVVTTLRHRGSSLAWARDRRGRGATS-----SAVRMQQ---SDEELQVAVRTLAAQVEDLTAIVRRLAEETGPGAGGAEVAPSATSHNINGSAAGNGAGVPGVTA---AGVKELVSTSAAQQRIERWLSESGGGQTVTASPQAPAVSPVAVASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGYKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDELP 1080
            L++AC L   A+C LCGAF+PP                               SAVRMQQ   SD+ELQVAV  LA QVE+LTA+V +LA E G  AG A+         ING     G+ +P V+     G   LVSTSAAQQRI++WL ESGG     A+    A         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+GYKVKIEW+GAIHEV CDAETT+LEAAMDAGLELP SCMSGSCLTCPGK+VSGSVDQSEGVLEDEQ +AG+LLTCISYP+SD+HFAV++E++LP
Sbjct:   11 LTLACAL---AWCGLCGAFVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVRMQQGSGSDQELQVAVSKLAGQVEELTAMVAQLAAEPGGNAGAAKA--------INGGVVDGGSALPVVSTKAKGGSTPLVSTSAAQQRIDQWLRESGG----EAASAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.430e-40
Identity = 125/248 (50.40%), Postives = 145/248 (58.47%), Query Frame = 1 
Query:  376 SDEELQVAVRTLAAQVEDLTAIVRRLAEETGPGAGGAEVAPSATSHNINGSAAGNGAGVP--------GVTAAGVKE------LVSTSAAQQRIERWLSESGGGQTVTASPQAPAVSPVAVASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGYKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            S +EL  AV  L AQV  LTA+V+ +A      A GA  AP+A           NGA VP        G+ A  V        LV  SAA+ RI+ +L+  G              +P      XXXXXXXXXXXXX      XXXXX     G GY V I+WDGA H V CD ETTVLEAAMDAGL+LPHSCMSGSCLTCPG+L +G V+Q +GVLED+Q  AG +LTC+SYP SDL F VI EDEL
Sbjct:    8 SPQELVKAVEALQAQVTQLTALVKEMAASE---ANGAAAAPAAKI---------NGAAVPLKAPTLQTGLIAGTVASAPPGEILVPVSAAEARIQSFLASQG------------KAAPXXXXXXXXXXXXXXXXXXXAAVPAAXXXXXPEAPPGDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 115 bits (288), Expect = 2.660e-26
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE  G + E+  D E T+L  A+D+GLE+PH C  G C+TCP +L+SGSVDQSEG+L D+  E GY L C SYP+SD H   I EDEL
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A2J6KNW1_LACSA (Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KNW1_LACSA)

HSP 1 Score: 114 bits (285), Expect = 7.360e-26
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE +G   E+  D + T+LE A+D+G+ +PH C  G C+TCP KL+SGSVDQSEG+L D+  E GY L C+SYP+SD H  +I E+EL
Sbjct:   49 YKVAIEHEGETTELEVDPDETILEKALDSGMSVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 140
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A103Y2Z7_CYNCS (Ferredoxin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y2Z7_CYNCS)

HSP 1 Score: 114 bits (284), Expect = 9.460e-26
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE +G   E+  D + T+LE A+D GL++PH C  G C+TCP KL+SGSV+QSEG+L D+  E GY L C+SYP+SD H  +I E+EL
Sbjct:   47 YKVSIEHEGQTTELEVDPDETILEKALDTGLDVPHDCKLGVCMTCPAKLLSGSVNQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 138
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A0B2R7M6_GLYSO (Ferredoxin C 1, chloroplastic n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0B2R7M6_GLYSO)

HSP 1 Score: 113 bits (282), Expect = 1.710e-25
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE DG   EV  + + T+L  A+D+GL +PH C  G C+TCP +L+SGSVDQS+G+L D+  E GY L C +YPQSD H  +I EDEL
Sbjct:   46 YKVVIEHDGESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISGSVDQSDGMLSDDVVERGYALLCAAYPQSDCHIKIIPEDEL 137
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 112 bits (279), Expect = 3.530e-25
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE +G+I E+  D + T+L  A+D GL +PH C  G C+TCP KL+SGSVDQSEG+L D+  + GY L C++YP+SD H   I E+EL
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130
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BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A6P5SE90_PRUAV (Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5SE90_PRUAV)

HSP 1 Score: 112 bits (279), Expect = 4.330e-25
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV +E +G   E+  +A+ T+LE A+++GL +PH C  G C+TCP +L+SG VDQ+EG+L D+  E GY L C+SYPQSD H   I EDEL
Sbjct:   46 YKVVVEHEGLSTELEVEADETILEKALESGLSVPHDCKLGVCMTCPARLLSGKVDQNEGMLSDDVVEGGYTLLCVSYPQSDCHIKTIPEDEL 137
[Close]
BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: A0A1S2YX51_CICAR (ferredoxin C 1, chloroplastic n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YX51_CICAR)

HSP 1 Score: 112 bits (279), Expect = 4.590e-25
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:  796 TGYKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            + YKV IE +G   ++  + + T+L  A+D+GL +PH C  G C+TCP KL+SGSVDQS+G+L D+  E GY L C SYP+SD HF  I EDEL
Sbjct:   46 SSYKVVIEHEGQTTQLEVEPDETILSKALDSGLSVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVERGYALLCASYPRSDCHFRTIPEDEL 139
[Close]
BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Match: K7LMC9_SOYBN (Ferredoxin n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7LMC9_SOYBN)

HSP 1 Score: 111 bits (278), Expect = 5.900e-25
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 1 
Query:  802 YKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDEL 1077
            YKV IE DG   EV  + + T+L  A+D+GL +PH C  G C+TCP +L+SGSVDQS+G+L D+  E GY L C +YPQSD H  +I E+EL
Sbjct:   46 YKVVIEHDGESTEVEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLISGSVDQSDGMLSDDVVERGYALLCAAYPQSDCHIKIIPEEEL 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig853.16701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5N8_ECTSI3.000e-6759.80Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A835YL41_9STRA8.430e-4050.40Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
UPI0010A2FF492.660e-2656.52ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb... [more]
A0A2J6KNW1_LACSA7.360e-2654.35Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6... [more]
A0A103Y2Z7_CYNCS9.460e-2654.35Ferredoxin n=1 Tax=Cynara cardunculus var. scolymu... [more]
A0A0B2R7M6_GLYSO1.710e-2554.35Ferredoxin C 1, chloroplastic n=2 Tax=Glycine subg... [more]
A0A7J7LHT5_9MAGN3.530e-2553.26Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ... [more]
A0A6P5SE90_PRUAV4.330e-2552.17Ferredoxin n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5S... [more]
A0A1S2YX51_CICAR4.590e-2552.13ferredoxin C 1, chloroplastic n=1 Tax=Cicer arieti... [more]
K7LMC9_SOYBN5.900e-2553.26Ferredoxin n=2 Tax=Glycine subgen. Soja TaxID=1462... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig853contigS-dermatodea_contig853:15277..20071 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score112.8
Seed ortholog evalue2.7e-22
Seed eggNOG ortholog102107.XP_008224313.1
KEGG koko:K02639
KEGG Pathwayko00195,map00195
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009642,GO:0009644,GO:0009987,GO:0016491,GO:0022900,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0055114
EggNOG free text desc.Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
EggNOG OGs2RZRG@2759,37VRI@33090,3GITD@35493,4JTZ2@91835,COG0633@1
COG Functional cat.C
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorysignal peptide
Ec32 ortholog description2Fe-2S ferredoxin-type domain
Ec32 orthologEc-12_008550.1
Exons4
Model size2522
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig853.16701.1prot_S-dermatodea_contig853.16701.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig853 15451..18632 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925349.9644227-UTR-S-dermatodea_contig853:15276..154501622925349.9644227-UTR-S-dermatodea_contig853:15276..15450Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig853 15277..15450 +
1694079873.7580042-UTR-S-dermatodea_contig853:15276..154501694079873.7580042-UTR-S-dermatodea_contig853:15276..15450Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig853 15277..15450 +
1622925350.0249233-UTR-S-dermatodea_contig853:18632..200711622925350.0249233-UTR-S-dermatodea_contig853:18632..20071Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig853 18633..20071 +
1694079873.8120165-UTR-S-dermatodea_contig853:18632..200711694079873.8120165-UTR-S-dermatodea_contig853:18632..20071Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig853 18633..20071 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925349.974692-CDS-S-dermatodea_contig853:15450..158661622925349.974692-CDS-S-dermatodea_contig853:15450..15866Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 15451..15866 +
1694079873.7679143-CDS-S-dermatodea_contig853:15450..158661694079873.7679143-CDS-S-dermatodea_contig853:15450..15866Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 15451..15866 +
1622925349.9878023-CDS-S-dermatodea_contig853:17346..175631622925349.9878023-CDS-S-dermatodea_contig853:17346..17563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 17347..17563 +
1694079873.7824068-CDS-S-dermatodea_contig853:17346..175631694079873.7824068-CDS-S-dermatodea_contig853:17346..17563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 17347..17563 +
1622925350.0020561-CDS-S-dermatodea_contig853:17741..179391622925350.0020561-CDS-S-dermatodea_contig853:17741..17939Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 17742..17939 +
1694079873.7940578-CDS-S-dermatodea_contig853:17741..179391694079873.7940578-CDS-S-dermatodea_contig853:17741..17939Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 17742..17939 +
1622925350.0126512-CDS-S-dermatodea_contig853:18554..186321622925350.0126512-CDS-S-dermatodea_contig853:18554..18632Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 18555..18632 +
1694079873.802734-CDS-S-dermatodea_contig853:18554..186321694079873.802734-CDS-S-dermatodea_contig853:18554..18632Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig853 18555..18632 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig853.16701.1

>prot_S-dermatodea_contig853.16701.1 ID=prot_S-dermatodea_contig853.16701.1|Name=mRNA_S-dermatodea_contig853.16701.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=303bp
MMMMQPPSPTRRLSMACGLLLLAYCSLCGAFLPPPVVTTLRHRGSSLAWA
RDRRGRGATSSAVRMQQSDEELQVAVRTLAAQVEDLTAIVRRLAEETGPG
AGGAEVAPSATSHNINGSAAGNGAGVPGVTAAGVKELVSTSAAQQRIERW
LSESGGGQTVTASPQAPAVSPVAVASPAVAEVVATPVAPEVEAPPAEAVP
AAAAPAGTGYKVKIEWDGAIHEVMCDAETTVLEAAMDAGLELPHSCMSGS
CLTCPGKLVSGSVDQSEGVLEDEQTEAGYLLTCISYPQSDLHFAVIEEDE
LP*
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mRNA from alignment at S-dermatodea_contig853:15277..20071+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig853.16701.1 ID=mRNA_S-dermatodea_contig853.16701.1|Name=mRNA_S-dermatodea_contig853.16701.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4795bp|location=Sequence derived from alignment at S-dermatodea_contig853:15277..20071+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTTGCCCTCAACGATCACCGTTCACAGCGCACCAGACACACCCGATCACG
CACCCATCCCCCTGGCTTGCAACTGGACACCACTCGCACTCTAGTACCCT
CCAACCGCTGGTGTGAACGCCCTGGCGCATCGCAACCCATCCAGCACTTT
CTTCACAAGAACAGAGCGTTGTGCATGATGATGATGCAACCACCATCGCC
GACGCGTCGCTTGTCTATGGCCTGCGGCTTGCTTTTGCTCGCCTACTGCA
GTCTGTGTGGAGCGTTCCTCCCGCCTCCTGTCGTAACCACGTTGCGACAC
CGTGGGTCCTCGTTAGCGTGGGCACGCGATCGACGGGGGCGCGGAGCCAC
CTCCAGTGCTGTCCGCATGCAGCAGTCAGACGAGGAACTGCAGGTGGCAG
TTCGGACGCTAGCGGCCCAGGTGGAGGACTTGACCGCCATCGTAAGGCGG
CTGGCCGAGGAGACGGGCCCAGGCGCGGGCGGAGCGGAAGTGGCGCCGTC
TGCTACGAGCCACAACATCAATGGCTCGGCTGCGGGTAACGGGGCAGGCG
TGCCTGGAGTAACAGCTGCCGGGGTCAAGGAGCTTGTGAGGTAAGGGATT
CTGGCTGAACAACGACAGACGACAACAAGCCCCCTTGTGTGTGCTTGTGT
ACTTCATCGTTTCAGCGAGGTCCTGACCTGCGACTCGTGTGCGGCTCTGA
TGGTGTGTACAACAGTACTATGCATAGACACATCTTACATGTCATACCGC
CTTTGCCAGTGTCCGCCTTCCCTTGCTTGTTCTGAATAAAGAAGCTTTGT
ATTTGGTCAGGTCGGCTGCTATCGGACTATCCATGATACATACGGTAGTT
CTAGAGCTATACTTTGGCATCTGCAACACACCGTCGTGTGTACATACACA
TCACATTCATCGAGCTGCGGACCAGGCGTACCGTTACTGACCGCTGGGCA
TGTAAGCTGGGCACATCCTTGGACATGGCCGTCCCTCTCATCGACCCCCA
ACAATTTCCCTCCGTTTTCCCAAGGATAGTCACGGTTTAGAGTGTGGACT
TGTGGGCTTAGCTGAAATTTCCCGAGAAGCAGGGCGGTGGGCCCTATTCG
CCGTTGTGGTATGATATGTACCACTATTTCATTTTTCGACCCGCTAATCA
TCCCGCTTATATGCCTGATTTGTCCCCGGGGCCGCCTCCCTGCCGTGCCC
TTTTGTCTGTGGTCGGTAAGCGATGGTCGTGTTTGTGTGAGCAGTAGTGC
TACCAGTGATGCTTGCGTTTTGTTGGGTCCTTGCATGATGGGAGATGGGG
TTTTGGGTTCTGGTTGCGCACCTGACGGTTACATGCCGAACTGGTACTTT
GGGCTATTGATCTTTGTTCTGGCATATTTCCCAGGGATGTACAAGTATGT
GCAGTGCTGTGAAGGGTGGCCTGTGGTGTGGCGCAGGCTTTGCCCTCTTT
GCTCCGAGGTCAGAGCAAACTACCATACAAGTTTATGTTTTCCCTTCTCC
GCTGATCGGCTACCAAGCCGTCCATCGCTGCATGCATATCGTCTACGGAA
TATACTAACACGTTGCTGTTGCTTTGGTGGGTAGACGTTGCAACAGCTGG
GCAGCATGTATACAAGTACATGTATACAACCAATTGGGTTGCCGATCTGA
TGTACGCAGCCCAAGAACGGAGCGCGTCCGGTTAGCTCTGAATCGTCGGT
GACGACTTATTTTTACCAACCCGCTTTCATCTAGAAAATATGCTGACGAT
ACGAAGAGCGGCACCGTCTGGAGTTGGGCGGCAGCCGTCAACATGTCTCA
AAAGAGCGGGACGCTGTGGGGTGTCCGACGCATGGTGGCGCAACCAGTGG
AGTGGGCGCGGCGTACGCAGGTTCAAGCTGGCGGTTCAGCTCGACCCAAG
CTCGACGGAGCCAAATCCATTTTGGTGTCACGGCAAGAGCCTCTGTTGTG
TATGGCTGGTCAGGCCGAGTCGCTTAACACCCATGCCCGTTATGCATAGC
AACCCTAACAATCGCGTGGACCACGGGCACATTCCCACGGCATACCGCTT
CCTCACTCCCATCCTCGCAGCACGTCGGCAGCCCAGCAGCGGATCGAACG
ATGGCTCAGTGAGTCGGGCGGCGGGCAAACGGTGACGGCCTCACCTCAAG
CGCCAGCGGTTTCGCCGGTCGCGGTGGCCTCCCCTGCAGTCGCAGAAGTG
GTTGCCACCCCGGTCGCGCCTGAGGTCGAGGCCCCCCCGGCTGAGGCCGT
GCCCGCTGCTGCTGCCCCAGCGGGGACCGGTTACAAGGTACGGAACGTTA
GAGCTGTGCCTCTGAATTTCGGTTGGTGCACCCTTTGTGTGACACATACA
GCAGCAGTACATTATGGTGTGTACAGTATGGAAATATCAACTCTGGTACA
AGTATTATGGTGTAACTTACAGGTCTTATGCTCGTTCCCCATGCGATCAC
CCGTTTCTTTCGAAGGTGAAAATCGAATGGGACGGGGCCATCCACGAGGT
TATGTGCGACGCGGAGACGACCGTGCTCGAAGCGGCTATGGATGCTGGCC
TGGAGCTGCCGCACTCGTGCATGTCGGGAAGCTGCCTGACGTGCCCCGGC
AAGCTCGTCAGTGGCTCGGTCGACCAGAGCGAGGGGGTGTTAGAGGACGA
GCAAACAGAAGCGGTGCGCATCTTACCGACGTGTTGGGAGGGTGGGGTGG
ATAAGGGTGGGACGAAGCAATGGACGCCTTTCCTATCATGCTGCTTCGGG
CAAATGTTGAAGCTCTCCCACGAAATCGTCCGTGCGTTCGTGGTGTCCGA
CTCGTTGCTACGAAGTTTTAATCAAAACGTCGTCGTCGGGTTGGGGTAGG
GTTGGGGTAGGGTGCCAGTGCCACAATGAAAACCGCATTGCAACCCCAAA
TGATCATGCTGGTCTCGAGATTGAAATATGACTATTAATACTATGTGTGG
CTTTCCCCCCGCCATTTGTAGGCAGCACACACCAGCAAAGGGCATTCCGG
CGCATGTATGTGTGAAAGCGACACCTCGACCAAGGTGCACTGACCCATGC
CGTGCATAGGCAAAATAGGTTGTGTTCCTTCGACACCACACAACGTCTGT
GCAGCTGCGCCACAACTATGTTCCACTCAACCCCCAAAACGTCGTAGTCT
GGAACGGTTTTACGACGTAACGGTTTGGATATGCCCGCTGCATGTTATCC
ACCTTTTTCTAAGAGCGTGCTGTTTCTCGCTTCCTCAACAACGTCCGCTG
GCCTTCTTGTGTCGTGCTTCTCTGGCAGGGTTACTTGCTGACGTGCATAT
CCTACCCTCAAAGCGACTTGCACTTCGCTGTCATCGAAGAGGACGAGCTG
CCATGACACCGCACGTCAACAATCGTTAGGAACACTAGGACATTACCGCG
CCAAGAAGTCTCGGCAGTGTTAGACGCCTGCATCGACATGTGGGCCGTTG
GTCGTGGACTTGTTGAAAGCGACGTCGTGTGAATCCGAAAATCGCTGCTC
TAAGTTTGCGTCCATGAGGGTTGTGCGGTTGGGCGTACGTGGAAGTGATC
GGTCCGAGTTGCGCGCTCAGCACATGATTCATCTTTGCAAGCTGTTTGTC
ACATGTGGTGAGATCGTTGGGCGCGTCCAGGGGTTTGTTTTCGACCACAT
GTCGGACTGAGAACAGCCAAAGTGAGAGCCTGCCTATTTTCTGCCCGCTT
CTTGGGCATATTTGAATTGAAGTGGTAAGCATTGCTCGTAGGGGTATGTT
ATGTGCTTGTTGCGTGTATCTTTGATTGGGTAGCACGGCGAGCATGCAGA
CGGTGTTCGTATGTTGGTTGCGGTAGCTCGGCTTAACGGAGCGATGTATC
CTAGCATGAATGCATGTTCGTCGATGTTGCCATTTTATTCAGCGCCGGGG
CGCGATGTTACACACTCTTCTCTGCGGCTGGTTAAGTGTGTCGGAATGAG
TCGTCTTAATTGCCTTGGTGTCGACGGCCGTGCCAAGTAAGGAAACGTGG
AGTTCGTTGAAACCACCGTTTTGGGCTTTTTGTCAAACGTGGTGTCTGTA
CAATATCGTCCCTGCTTTGACCCTTGAATATCGCATAATGGCATTGGACG
CCGCGACCTGGTCGCCCGCCATTATTACGAGCTGCTTGTGCATGTATGGT
ACTCGGATCTCGTTTGTTATTCCATTCTGGAAGCGATTCTTGCGTTTTCG
CGCGTCTTGCGTTCGTTTGACTGGCCACCGGTGAGCGTCTTCGACCTACT
ATTAATAGAGAAGCCCTGTCTGTGATACCTTGCACGGTGTTTATCCAGCA
ACCCGTTCATGAAGCATGCGCTGTTGGTCTTATGAAACAAGTTGTTTCAA
CAAGTGGCGAACGGGCTCGCAAACCTCAATAGTAGGGGTAAATTGCAGTA
AAACGTCAGATGCAGCGATGCCCCAGCACACCCCACCCGTGGGCATGCCG
CTCCTGCGAAAATTGAAATGGGGCCATGAGAGTAAAACAGCTGACAGGTG
GTTTCGTGTTTTCGTGGACACCAGTGTGCTTGCCAACACTGCAACACTGG
CATCGCCCATAAAGCACTACCAGGTATGTTCTTAGGGGTTGGCGTCTATG
CTACCAAGGTTGATGCTGCGGACTCTAGTGAACTAGAGACCGCACGAGTA
GCACAGAGAGTCTGAAAACGGCGTGTGACCAATCTATGCAGGCGCGAACA
GTGCAGGCAAAAGCAGCCACGAGGGCTGTCAATAGCACGTTGCGGTGCTG
ACTCAAGTGGGAGGAGGGGGGTGCTGATGCATGCAGGGGGAAGGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig853:15277..20071+

>mRNA_S-dermatodea_contig853.16701.1 ID=mRNA_S-dermatodea_contig853.16701.1|Name=mRNA_S-dermatodea_contig853.16701.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at S-dermatodea_contig853:15277..20071+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATGATGATGCAACCACCATCGCCGACGCGTCGCTTGTCTATGGCCTG
CGGCTTGCTTTTGCTCGCCTACTGCAGTCTGTGTGGAGCGTTCCTCCCGC
CTCCTGTCGTAACCACGTTGCGACACCGTGGGTCCTCGTTAGCGTGGGCA
CGCGATCGACGGGGGCGCGGAGCCACCTCCAGTGCTGTCCGCATGCAGCA
GTCAGACGAGGAACTGCAGGTGGCAGTTCGGACGCTAGCGGCCCAGGTGG
AGGACTTGACCGCCATCGTAAGGCGGCTGGCCGAGGAGACGGGCCCAGGC
GCGGGCGGAGCGGAAGTGGCGCCGTCTGCTACGAGCCACAACATCAATGG
CTCGGCTGCGGGTAACGGGGCAGGCGTGCCTGGAGTAACAGCTGCCGGGG
TCAAGGAGCTTGTGAGATGATGATGATGCAACCACCATCGCCGACGCGTC
GCTTGTCTATGGCCTGCGGCTTGCTTTTGCTCGCCTACTGCAGTCTGTGT
GGAGCGTTCCTCCCGCCTCCTGTCGTAACCACGTTGCGACACCGTGGGTC
CTCGTTAGCGTGGGCACGCGATCGACGGGGGCGCGGAGCCACCTCCAGTG
CTGTCCGCATGCAGCAGTCAGACGAGGAACTGCAGGTGGCAGTTCGGACG
CTAGCGGCCCAGGTGGAGGACTTGACCGCCATCGTAAGGCGGCTGGCCGA
GGAGACGGGCCCAGGCGCGGGCGGAGCGGAAGTGGCGCCGTCTGCTACGA
GCCACAACATCAATGGCTCGGCTGCGGGTAACGGGGCAGGCGTGCCTGGA
GTAACAGCTGCCGGGGTCAAGGAGCTTGTGAGCACGTCGGCAGCCCAGCA
GCGGATCGAACGATGGCTCAGTGAGTCGGGCGGCGGGCAAACGGTGACGG
CCTCACCTCAAGCGCCAGCGGTTTCGCCGGTCGCGGTGGCCTCCCCTGCA
GTCGCAGAAGTGGTTGCCACCCCGGTCGCGCCTGAGGTCGAGGCCCCCCC
GGCTGAGGCCGTGCCCGCTGCTGCTGCCCCAGCGGGGACCGGTTACAAGC
ACGTCGGCAGCCCAGCAGCGGATCGAACGATGGCTCAGTGAGTCGGGCGG
CGGGCAAACGGTGACGGCCTCACCTCAAGCGCCAGCGGTTTCGCCGGTCG
CGGTGGCCTCCCCTGCAGTCGCAGAAGTGGTTGCCACCCCGGTCGCGCCT
GAGGTCGAGGCCCCCCCGGCTGAGGCCGTGCCCGCTGCTGCTGCCCCAGC
GGGGACCGGTTACAAGGTGAAAATCGAATGGGACGGGGCCATCCACGAGG
TTATGTGCGACGCGGAGACGACCGTGCTCGAAGCGGCTATGGATGCTGGC
CTGGAGCTGCCGCACTCGTGCATGTCGGGAAGCTGCCTGACGTGCCCCGG
CAAGCTCGTCAGTGGCTCGGTCGACCAGAGCGAGGGGGTGTTAGAGGACG
AGCAAACAGAAGCGGTGAAAATCGAATGGGACGGGGCCATCCACGAGGTT
ATGTGCGACGCGGAGACGACCGTGCTCGAAGCGGCTATGGATGCTGGCCT
GGAGCTGCCGCACTCGTGCATGTCGGGAAGCTGCCTGACGTGCCCCGGCA
AGCTCGTCAGTGGCTCGGTCGACCAGAGCGAGGGGGTGTTAGAGGACGAG
CAAACAGAAGCGGGTTACTTGCTGACGTGCATATCCTACCCTCAAAGCGA
CTTGCACTTCGCTGTCATCGAAGAGGACGAGCTGCCATGAGGTTACTTGC
TGACGTGCATATCCTACCCTCAAAGCGACTTGCACTTCGCTGTCATCGAA
GAGGACGAGCTGCCATGA
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