prot_S-dermatodea_contig853.16699.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: D7G5N9_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N9_ECTSI) HSP 1 Score: 233 bits (594), Expect = 6.710e-78 Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
MLFCPTDG+LLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKI LKKKAVDDIMGG+DAWANVDKTQ TCPFCNNKEAFFLMVQLRSADEPMTCFYKCT CKQRWKE
Sbjct: 1 MLFCPTDGSLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIALKKKAVDDIMGGDDAWANVDKTQTTCPFCNNKEAFFLMVQLRSADEPMTCFYKCTNCKQRWKE 108
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A836CB68_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB68_9STRA) HSP 1 Score: 145 bits (365), Expect = 6.350e-43 Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNN----KEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
MLFCPT GNLLMVE+ +G RF CQTCPY+HP+ K+T+ + L++K VDD++GG DAW NVDK C C + KEA+F QLRSADEPMT FYKC C RW E
Sbjct: 1 MLFCPTCGNLLMVEAATRGGQRFACQTCPYVHPLGQGGKVTKALTLQRKEVDDVLGGADAWVNVDKAPVACADCKDPGKGKEAYFFQAQLRSADEPMTVFYKCVDCGFRWNE 112
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A024UTD8_9STRA (DNA-directed RNA polymerase subunit n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UTD8_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.550e-41 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
M FCPT GNLLMVE G RFCCQTCPYI+ + + K+ K+ L++K VDD++GG++AW NVD+T CPFC + +A+F+ +Q+RSADEP T FYKCT CK++W +
Sbjct: 1 MHFCPTCGNLLMVEPDSDGM-RFCCQTCPYIYKI--NQKVETKVPLQRKKVDDVLGGDEAWENVDQTDTRCPFCEHTKAYFMQIQIRSADEPSTTFYKCTGCKKQWND 105
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: W7TK62_9STRA (DNA-directed RNA polymerase subunit n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK62_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.050e-40 Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRW 106
M FCP NLL+VE G Q + RFCCQTCPYI + + KI++ + LK+K VDD++GGEDAWA D+T CPFC++ EAFF+ +Q+RSADEPMT FY+CT C RW
Sbjct: 1 MKFCPICSNLLLVELGEQNF-RFCCQTCPYISVI--TKKISKTMKLKRKEVDDVLGGEDAWAAADRTTTACPFCDSMEAFFVQMQIRSADEPMTTFYRCTLCANRW 103
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A058ZBP1_FONAL (DNA-directed RNA polymerase subunit n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZBP1_FONAL) HSP 1 Score: 136 bits (343), Expect = 1.300e-39 Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQ--GWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
MLFCP GN+L+V S G +F CQTCPY+H ++ KI+ +I+LK+K VDD++GGE +W NVD T+ CP C+N+ A+F+ +Q+RSADEPM+ FYKCTKC +W+E
Sbjct: 1 MLFCPGCGNVLLVNSDASDIGDFQFACQTCPYVHSIKR--KISSRIILKRKEVDDVLGGEGSWDNVDSTEVPCPKCDNRRAYFMQIQIRSADEPMSTFYKCTKCAAQWRE 108
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A1Y1IMC9_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMC9_KLENI) HSP 1 Score: 134 bits (338), Expect = 7.490e-39 Identity = 60/110 (54.55%), Postives = 80/110 (72.73%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTK--CKQRWKE 108
M FCPT NLL+VE G G R+ CQTCPY++ ++ K+ K+ L +K VDD++GGE+AW NVDKT+ATCP C EA+F+ +Q+RSADEPM+ FYKC K C +W+E
Sbjct: 1 MDFCPTCANLLLVEGGNMGELRYFCQTCPYVYTIKA--KMKNKLPLARKEVDDVLGGEEAWRNVDKTEATCPKCRYGEAYFMQIQIRSADEPMSTFYKCCKPECSHQWRE 108
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A7S0RJ62_9CHLO (DNA-directed RNA polymerase subunit n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJ62_9CHLO) HSP 1 Score: 134 bits (337), Expect = 1.000e-38 Identity = 59/108 (54.63%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
M FCPT G LLMVE R+ CQTCPY++ ++ KI ++ VL+ K VDD++GG++AWANVD+T+ +CP C++ +A+F+ VQ RSADEPMT FYKC KC RWK+
Sbjct: 2 MTFCPTCGTLLMVEYCELTRLRYACQTCPYVYMIDR--KIVKEHVLETKEVDDVLGGDEAWANVDRTEVSCPKCDHGQAYFMQVQTRSADEPMTIFYKCCKCANRWKD 107
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A077ZVQ1_STYLE (DNA-directed RNA polymerase subunit n=2 Tax=Oxytrichidae TaxID=57506 RepID=A0A077ZVQ1_STYLE) HSP 1 Score: 133 bits (334), Expect = 2.780e-38 Identity = 57/108 (52.78%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
MLFCPT NLL++E + RF C+TCPY+ +E + +K+ L++K VDD++GG++AW NVD+ +A CP CNNK A+F+ +Q+RSADEPMT FYKCT+C +W+E
Sbjct: 1 MLFCPTCANLLLIEKTHSDF-RFFCKTCPYVFVVEQN--FEKKMQLERKEVDDVLGGKEAWENVDQIEAQCPKCNNKRAYFMQIQIRSADEPMTTFYKCTQCSYQWRE 105
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A6G0XP80_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP80_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.380e-38 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQ---------------ATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
M FCPT GNLLMVE G RFCCQTCPYI+ +E K+ +K+ L++K VDD++GG+ AW NVD+T+ A CPFC + +A+F+ +Q+RSADEP T FYKC CK++W +
Sbjct: 1 MHFCPTCGNLLMVEPDTDGM-RFCCQTCPYIYKIE--SKVQKKVPLQRKQVDDVLGGDQAWENVDQTESLTSFVALYLMFSSVARCPFCQHDKAYFMQIQIRSADEPSTTFYKCVACKKQWND 120
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Match: A0A7S0PIB0_CAFRO (DNA-directed RNA polymerase subunit n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PIB0_CAFRO) HSP 1 Score: 132 bits (332), Expect = 8.300e-38 Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 0
Query: 1 MLFCPTDGNLLMVESGPQGWTRFCCQTCPYIHPMEPSDKITRKIVLKKKAVDDIMGGEDAWANVDKTQATCPFCNNKEAFFLMVQLRSADEPMTCFYKCTKCKQRWKE 108
MLFCPT GN+L++E G T+F C TCPYI + + KIT+ I L++K VDD++GG AW NVD+T A CP C ++ A+F+ +Q+RSADEPMT FYKC C RW +
Sbjct: 16 MLFCPTCGNMLLIEGG--AGTKFFCTTCPYIQRV--TTKITKSITLERKTVDDVLGGAAAWENVDQTDALCPACGHRRAYFMQLQIRSADEPMTTFYKCVACSGRWND 119 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig853.16699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig853.16699.1 ID=prot_S-dermatodea_contig853.16699.1|Name=mRNA_S-dermatodea_contig853.16699.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=109bpback to top |