mRNA_S-dermatodea_contig852.16693.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A6H5KD56_9PHAE (SufE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 3.350e-131 Identity = 231/320 (72.19%), Postives = 257/320 (80.31%), Query Frame = 1
Query: 100 MSARRVVLSAASLASSICSVGQAFVTPQ-ALQQGGAFSP-RIASHPRRAVPAPT-----RQGRV-AHRMSTSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDGLVYFKSDSDAMITKGLAGLL-SMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXX--EGGKMAARISEKLQKLEPLGLAIEDESGGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEEAGV 1026
M AR +LS A L++S+CSVG++FVTP A+ GGAFS R A R PA R GR A MSTST+LK+LGLTPELERLTKVFRSCP KMRQMQLLHL QMG+ +DPA TEENKVLGCLSTVYVAAE KDGL+Y+ +DSDAMITKG A LL +MGLSGN+ EAIQTVKPEFI+VAGLQASL AGRNNGFINMLRTMK KALALGGESA+RAA+E A PAAE E G MA+R++EKLQKLEPL L IEDESGGEESKF IK+VSKSFEGL LLKRHR VYGL+ADEMKIVHAV+L T TPEEAG+
Sbjct: 1 MVARAAILSVA-LSTSVCSVGESFVTPNVAVVPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A836CLM4_9STRA (Cysteine desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA) HSP 1 Score: 232 bits (591), Expect = 8.120e-67 Identity = 144/259 (55.60%), Postives = 165/259 (63.71%), Query Frame = 1
Query: 280 MSTSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEG---------GK-MAARISEKLQKLEPLGLAIEDESGGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEEAGV 1026
MST+ ++ELGLT ELERL K FRS P+ KMR QLL +A G L F T +NKV GCLSTV+V A+ K G VYF+ DSDA +TKGL +L GLSGN A IQ+VKPEFI+VAGLQ SLT GRNNGFINML TMK KAL XXX EG GK M I KLQ L P+ L +EDES +E KF I VVS +FEGL L+KRH+LV+ IADEMK VHAV L T TP E G+
Sbjct: 61 MSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGKPMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: M2XAG5_GALSU (Cysteine desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU) HSP 1 Score: 190 bits (482), Expect = 4.800e-51 Identity = 117/258 (45.35%), Postives = 153/258 (59.30%), Query Frame = 1
Query: 301 KELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALA----LGGESALRAAVEHAMPAAEXXXXXXE--GGKMAARISEKLQKLEPLGLAIEDES------------GGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKI-VHAVSLVTNTPEE 1017
K+LGLTPEL RL K F + P+ K+R QLL+LAQ E L + T ENKV GCLSTV+V + + ++FK DSDA +TKGL LL GL+G T E I+ + PEF+ VAGL SLT GRNNGF+NML+TMK KA L G S +P + E G + + I EKLQKL+P L + D+S E+ F++ VVS +F GL L+KRH+LVY L+ E+K +HA+ + TP E
Sbjct: 66 KKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETASGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSE 323
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A8J5XHT0_DIALT (SufE domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT) HSP 1 Score: 183 bits (464), Expect = 6.620e-49 Identity = 121/272 (44.49%), Postives = 159/272 (58.46%), Query Frame = 1
Query: 262 GRVAHR---MSTSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEA-KDGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEGGKMAAR---ISEKLQKLEPLGLAIEDESG------------GEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMK-IVHAVSLVTNTPEE 1017
GRVAH MS S LGLTPELE++ +VF+ P+ K+R QLL LAQ + +D ENKV GCLSTV+V A A G +++ DSDAM+TKGL LL+ GLSG+TA+ I V P+FI+ AG+ ASLT GRNNG +NML MK KA AL G A+ + A P+A EGG I + L KL+P + + D S E+ F ++VVS F GL L++RH+L+Y L+A+EM VHA+ + T E
Sbjct: 27 GRVAHAGMLMSAS-----LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGV-AVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITARTTAE 292
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A7S1T9Y1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD) HSP 1 Score: 181 bits (459), Expect = 3.760e-48 Identity = 116/258 (44.96%), Postives = 151/258 (58.53%), Query Frame = 1
Query: 277 RMSTSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAK-DGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEGGKMAARISEKLQKLEPLGLAIEDES-----------GGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKI-VHAVSLVTNTP 1011
R+ EL LGLTPELERLT+ F P+ KMR QLL +AQ ++D + MT ENKV GCLSTVYV A DG V+ DSDA +TKGL LL GL G T E I+ V PEFI+ +GL SLT GRNNGF+NML +KAKA A +S + P E + G + RI++KL L+P L I D+S E+ F+I++ S +FE L ++RHR++Y L+A E+ VHA+ + TP
Sbjct: 40 RVRVRCELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARACI-DSPVEVLSATPDPVVERNIPP-DAGPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTP 295
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A7S4I3L9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L9_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.560e-47 Identity = 120/270 (44.44%), Postives = 153/270 (56.67%), Query Frame = 1
Query: 289 STELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAA------EAKDGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRA-----AVEHAMP--AAEXXXXXXEGGKMAARISEKLQK-LEPLGLAIEDES----------GGEES---KFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEE 1017
+T LGLTPEL R+T F S P+ KMR QLL +A A+ P M ENKV GCLSTVYV A E + +V F +SD ++TKGL LL GLSG TAE +Q V PEFI A + SLT GRNNGF+NML MK KA +GG A A +VE AA EG M + KL L+P + + D S G EES F+I +V+++F+GL L+KRH+LVY L+ D M+ +HA+ +V TP+E
Sbjct: 76 ATTADPLGLTPELRRMTDAFASIPDEKMRYKQLLFMANQLPAISPDAMVPENKVPGCLSTVYVDAVMERDEERGEDVVKFLGESDGLLTKGLVALLVRGLSGCTAEEVQRVNPEFIHEAKISQSLTPGRNNGFLNMLAVMKKKAAEIGGPEAAAAGDDAGSVEEGEDEVAATLTFEEVEGKPMYNAMMAKLTTMLKPTSIELVDNSDQHAGHAGSKGWEESGESHFSINIVAEAFDGLSLVKRHQLVYMLLGDIMQKIHALQIVARTPDE 345
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A7S3Q629_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.450e-47 Identity = 113/271 (41.70%), Postives = 157/271 (57.93%), Query Frame = 1
Query: 280 MSTSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDG-----LVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALAL-------GGESALRAAVEHAMPAAEXXXXXXEGGKMAARISEKLQKLEPLGLAIEDESGGE-------------ESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEE 1017
M+ ++E++ LGLTPELE++TK F S P+ K+R QLL++A + LDP M ENKV GCLSTVYV A+D ++ F DSD +TKGL LL G+SG TAE IQ V PEFI A + SLT GRNNGF+NML MKAKA + GGE A A E + + + G M + E L KL+P+ L + D+S ES F + +V++ F+G+ L+KRH+L+Y ++ + M +HA+S+ P +
Sbjct: 50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEA-DADTEGVISSFDEIA----GKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQ 315
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A1Z5K9T0_FISSO (SufE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO) HSP 1 Score: 176 bits (447), Expect = 8.660e-47 Identity = 109/250 (43.60%), Postives = 144/250 (57.60%), Query Frame = 1
Query: 313 LTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYV---AAEAKDGLVY--FKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEGGKMAARISEKLQKLEPLGLAIED----------ESGGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEE 1017
LTPEL ++ F S + K+R QLL++A +DP+ ENKV GCLSTVYV A + DG++ F DSD ++TKGL LL GLSGNTAE IQ V P FI+ G+ ASLT GRNNGF+NML MK KA L A + P+ + M I + LQ L+P+ L +ED S E+ FN+++V+ +FEGL L+KRH+LVY L+ D M +HA+ + TPEE
Sbjct: 24 LTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKA------KQLEANYQATGPSESATTTAGDEKPMYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEE 267
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A7S2ZLB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD) HSP 1 Score: 174 bits (442), Expect = 7.680e-46 Identity = 109/259 (42.08%), Postives = 143/259 (55.21%), Query Frame = 1
Query: 283 STSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDGL--VYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEGGKMAARISEKLQKLEPLGLAIEDES--------GGEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKI----VHAVSLVTNTPEE 1017
+ E+ L LTP LE++ + P+SK+R QLLH A ++P TE NKV GCLSTV+V AE VYFK DSDA +TKGL +L GLSG+TA I+ V P+FIK +GL SLT GRNNGFINML+ MK KA L E+A + G A I L +L P+ L +ED S G+E+ IKVVS++FE + L+ RH+++Y L+ M VHA+ + T P E
Sbjct: 32 AADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVPGKPRATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Match: A0A4D9DCV6_9STRA (SufE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA) HSP 1 Score: 172 bits (437), Expect = 6.640e-45 Identity = 110/258 (42.64%), Postives = 149/258 (57.75%), Query Frame = 1
Query: 283 STSTELKELGLTPELERLTKVFRSCPNSKMRQMQLLHLAQMGEALDPAFMTEENKVLGCLSTVYVAAEAKDGLVYFKSDSDAMITKGLAGLLSMGLSGNTAEAIQTVKPEFIKVAGLQASLTAGRNNGFINMLRTMKAKALALGGESALRAAVEHAMPAAEXXXXXXEGGKMAARISEKLQKLEPLGLAIEDESG-----------GEESKFNIKVVSKSFEGLGLLKRHRLVYGLIADEMKIVHAVSLVTNTPEEAG 1023
ST + LGLTP L +++ F+ + + R LL LA + + ENKV GCLSTVYV A +DG VYF+ DSDA +TKGL LL G+SG +AE IQ VKPEFIK AG+ ASLT GRNNGF+NML +K KA+ + E A+ E M I+ L+P L ++D+S G ES F++++V+ FEGL L++RH+LVY ++A EM+ +HA+S+ TP EAG
Sbjct: 58 STDIDESSLGLTPRLFEVSRAFQLM-DERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDIARPVYSSCMKKLIN----FLKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig852.16693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig852.16693.1 >prot_S-dermatodea_contig852.16693.1 ID=prot_S-dermatodea_contig852.16693.1|Name=mRNA_S-dermatodea_contig852.16693.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=328bp MQHSTCLATADRRAPLFIMSARRVVLSAASLASSICSVGQAFVTPQALQQback to top mRNA from alignment at S-dermatodea_contig852:20975..24810- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig852.16693.1 ID=mRNA_S-dermatodea_contig852.16693.1|Name=mRNA_S-dermatodea_contig852.16693.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3836bp|location=Sequence derived from alignment at S-dermatodea_contig852:20975..24810- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig852:20975..24810- >mRNA_S-dermatodea_contig852.16693.1 ID=mRNA_S-dermatodea_contig852.16693.1|Name=mRNA_S-dermatodea_contig852.16693.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at S-dermatodea_contig852:20975..24810- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |