mRNA_S-dermatodea_contig85071.16679.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 1.270e-14 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKETVR 159
+GKRFGD+A DW L + IP LR W++RGYKVAIISNQ+GVG GKVD ++
Sbjct: 298 SGKRFGDAADDWQLWNGKIPTVLRKWHDRGYKVAIISNQMGVGTGKVDPRMLK 350
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: A0A7R9FRH0_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FRH0_9CRUS) HSP 1 Score: 55.5 bits (132), Expect = 1.450e-7 Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKETVR 159
+G+ F DW +L+ IP L+ RGYK+A ++NQLGV KGKV +E +R
Sbjct: 162 SGRVFATDRNDWRILYAEIPGKLKELASRGYKLAFLTNQLGVAKGKVGREELR 214
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: UPI000C6FB9C3 (uncharacterized protein F21D5.5 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI000C6FB9C3) HSP 1 Score: 54.7 bits (130), Expect = 2.710e-7 Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKV 141
+G F + DW LL+P +P L+ +Y GYK+ I+SNQ G+G GKV
Sbjct: 213 SGLEFPKDSNDWQLLYPEVPGKLKKFYTEGYKIVILSNQNGLGTGKV 259
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: A0A7D3QVN7_9VIRU (Polynucleotide kinase 3 phosphatase n=1 Tax=Fadolivirus 1 TaxID=2740746 RepID=A0A7D3QVN7_9VIRU) HSP 1 Score: 53.9 bits (128), Expect = 5.020e-7 Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 4 GKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKE 150
GK+FG++ DW + +IP L+ + G+ + IISNQ+G+ KGKVD E
Sbjct: 44 GKKFGETEDDWEIYDKSIPTKLKKLKDDGFNLVIISNQMGISKGKVDVE 92
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: Q6AXV0_RAT (Polynucleotide kinase 3'-phosphatase n=23 Tax=Tetrapoda TaxID=32523 RepID=Q6AXV0_RAT) HSP 1 Score: 53.9 bits (128), Expect = 5.070e-7 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKETVR 159
+GK F S +DW +L+P IP L+ GYK+ I++NQ+G+G+GK+ E +
Sbjct: 180 SGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVILTNQMGIGRGKLPAEVFK 232
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: A0A8C6QZL9_NANGA (Polynucleotide kinase 3'-phosphatase n=9 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6QZL9_NANGA) HSP 1 Score: 52.0 bits (123), Expect = 2.430e-6 Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKV 141
+GK F S +DW +L+P IP L+ Y G K+ I++NQ+G+G+GK+
Sbjct: 180 SGKVFPTSPSDWRILYPEIPKKLQDLYAEGCKLVILTNQMGIGRGKL 226
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: A0A6A7AKP7_9PLEO (DNA kinase/phosphatase Pnk1 n=1 Tax=Ophiobolus disseminans TaxID=1469910 RepID=A0A6A7AKP7_9PLEO) HSP 1 Score: 51.2 bits (121), Expect = 4.530e-6 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKETVR 159
+GK F ATDW H ++P AL+ +E+GY VAI+SNQ G+ K D +TV+
Sbjct: 94 SGKVFSRDATDWKWWHRSVPGALKELHEKGYLVAIVSNQGGISL-KSDPKTVK 145
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: A0A8B7U876_CASCN (Polynucleotide kinase 3'-phosphatase n=3 Tax=Castor canadensis TaxID=51338 RepID=A0A8B7U876_CASCN) HSP 1 Score: 49.3 bits (116), Expect = 2.180e-5 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKE 150
+GK F DW +L+ IP L+ GYK+ I++NQ+G+G+GKV E
Sbjct: 184 SGKVFPTGPNDWRILYTEIPRKLQELCVEGYKLVILTNQMGIGRGKVPAE 233
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Match: UPI0019396931 (bifunctional polynucleotide phosphatase/kinase-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019396931) HSP 1 Score: 48.1 bits (113), Expect = 5.590e-5 Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 1
Query: 1 AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKV 141
+G+ F DW +L+ +P L+ YK+ II+NQLG+GKGK+
Sbjct: 224 SGRTFAKDHNDWKILYAEVPGKLKKLQNDQYKIVIITNQLGIGKGKL 270 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85071.16679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig85071.16679.1 >prot_S-dermatodea_contig85071.16679.1 ID=prot_S-dermatodea_contig85071.16679.1|Name=mRNA_S-dermatodea_contig85071.16679.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=53bp AGKRFGDSATDWTLLHPTIPAALRAWYERGYKVAIISNQLGVGKGKVDKEback to top mRNA from alignment at S-dermatodea_contig85071:255..413- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig85071.16679.1 ID=mRNA_S-dermatodea_contig85071.16679.1|Name=mRNA_S-dermatodea_contig85071.16679.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=159bp|location=Sequence derived from alignment at S-dermatodea_contig85071:255..413- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig85071:255..413- >mRNA_S-dermatodea_contig85071.16679.1 ID=mRNA_S-dermatodea_contig85071.16679.1|Name=mRNA_S-dermatodea_contig85071.16679.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at S-dermatodea_contig85071:255..413- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |