prot_S-dermatodea_contig8443.16615.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8443.16615.1
Unique Nameprot_S-dermatodea_contig8443.16615.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length199
Homology
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: D8LCR8_ECTSI (Pyruvate carboxylase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D8LCR8_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 5.270e-101
Identity = 164/198 (82.83%), Postives = 180/198 (90.91%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLGVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEIDV 198
            MP YKF  EMRQL G++G+ VTE+DL+SHAQYPAVFK+F   REEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQ+PDEEG RSVTFELNGQPRVVR+KDKSVAG + AR KAD +V+GSVGAPMPGVVVG+KV  G+ V QGQPLLVLSAMKMETNVASPADG+VKAL VK+GD+IQGNDLVAEIDV
Sbjct:  955 MPDYKFSKEMRQLVGEHGVAVTEQDLISHAQYPAVFKEFTKFREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQEPDEEGSRSVTFELNGQPRVVRVKDKSVAGSITARGKADDSVVGSVGAPMPGVVVGIKVNPGETVKQGQPLLVLSAMKMETNVASPADGIVKALHVKEGDNIQGNDLVAEIDV 1152          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A6H5L2A7_9PHAE (Pyruvate carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A7_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 6.680e-101
Identity = 163/198 (82.32%), Postives = 178/198 (89.90%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLGVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEIDV 198
            MP Y F  EMRQL G++G+ VTE+DL+SHAQYPAVFK+F   REEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQ+PDEEG RSVTFELNGQPRVVR+KDKSVAG + AR KAD +VIGSVGAPMPGVVVG+KV  G+ V QGQPLLVLSAMKMETNVASPADG+VKAL VK+GD+IQGNDLV EIDV
Sbjct:  732 MPDYDFPKEMRQLVGEHGVAVTEQDLISHAQYPAVFKEFAKFREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQEPDEEGSRSVTFELNGQPRVVRVKDKSVAGSITARGKADDSVIGSVGAPMPGVVVGIKVHPGETVKQGQPLLVLSAMKMETNVASPADGIVKALHVKEGDNIQGNDLVVEIDV 929          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A4D9CY33_9STRA (Pyruvate carboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY33_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.080e-62
Identity = 112/197 (56.85%), Postives = 141/197 (71.57%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLGVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEID 197
            +PP+ F++E + L   YG  + + D+++HAQYP VF  + +  +E+ D+S+LDTRTF+ GMK G E+SVE+EHGK LF+KL SV   D  G R V FELNGQ RV++ KD     +VK RPKAD  + GSVGAPMPG+VV VKVK G  V +GQPLLVLSAMKMET + SPA G VK LLV  GD+I G DLV EI+
Sbjct: 1015 LPPFAFEDEKQGLLDLYGKHIRDVDVMTHAQYPQVFSKYQSFFKEYDDVSVLDTRTFLQGMKLGAEVSVELEHGKTLFVKLNSVGQVDATGHRDVIFELNGQQRVIKTKDTKADVNVKVRPKADLGIPGSVGAPMPGLVVEVKVKVGQAVKKGQPLLVLSAMKMETVLTSPAAGTVKTLLVGAGDNIAGGDLVVEIE 1211          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A835YR17_9STRA (Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR17_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.080e-57
Identity = 106/168 (63.10%), Postives = 129/168 (76.79%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGL-GVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETN 167
            M P+ FD     L  +YG   + E DL+SH QYPAVFK+FM  ++ +GDLS LDTRTFVSGMK GQEI+V+IE GK LFIKL+SV +PD+EG+R V FELNGQ R++++KD SV      R KAD ++IGSVGAPMPGVV+GVKVKTG RV  GQ L+VLSAMKMET+
Sbjct:  989 MAPFDFDAARVGLQQKYGKDNIRELDLMSHVQYPAVFKEFMDVKDTYGDLSKLDTRTFVSGMKIGQEIAVQIEVGKTLFIKLISVSNPDDEGIRQVVFELNGQQRIIKVKDNSVGASATRRGKADPSMIGSVGAPMPGVVLGVKVKTGARVKAGQSLVVLSAMKMETS 1156          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A836CLQ1_9STRA (Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLQ1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.250e-56
Identity = 102/168 (60.71%), Postives = 128/168 (76.19%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLG-VTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETN 167
            M P  FD     L  +YG   + + DL+SH QYPAVFK+FMA++++ GDLS+LDTRTFVSGMK GQE +V+IE GK+LFIKL SV +PD +G+R V FELNGQ R++++KD +V      R KAD +  GSVGAPMPGVV+GVKVK GD+V  GQPL+VLSAMKMET+
Sbjct:  948 MEPCDFDKARSALVKKYGSDHIRDVDLMSHIQYPAVFKEFMAAKDKFGDLSVLDTRTFVSGMKIGQESAVQIEVGKILFIKLQSVSNPDADGIRHVVFELNGQQRIIKVKDNAVGATATHRAKADPSNAGSVGAPMPGVVIGVKVKKGDKVASGQPLVVLSAMKMETS 1115          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: K0S261_THAOC (Pyruvate carboxylase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S261_THAOC)

HSP 1 Score: 201 bits (512), Expect = 2.520e-56
Identity = 102/198 (51.52%), Postives = 137/198 (69.19%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLG-VTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEID 197
            +PPY F +    L  ++G   ++  D++SHA YPAVF +FM ++EE+G +  LDTRTF++GMK GQE+ V +E GK L +KL+SV + D+EGV  + FELNGQPR V +KDKS      A+PKA   V GSVGA MPGVV+  KV  GD + +G PL+++SAMKMET + SP DG VK + V  GD ++G DLV EI+
Sbjct: 1128 LPPYDFASSKTSLEDKWGADKISPHDIMSHALYPAVFDEFMLAKEEYGGVGCLDTRTFLTGMKVGQELDVSLEKGKNLIVKLISVGESDDEGVVHIQFELNGQPRSVHVKDKSSKVAETAKPKALQGVTGSVGASMPGVVLETKVSKGDEIRKGDPLVLMSAMKMETIITSPCDGTVKQVAVTAGDHLEGGDLVVEIE 1325          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A662WMI8_9STRA (Lipoyl-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMI8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 5.470e-54
Identity = 94/199 (47.24%), Postives = 138/199 (69.35%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLG-VTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDE-EGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEID 197
            M PY F+   ++L  +YG   + + D++SHA YP VF+ FM  ++E G +  LDTR+F++G++   E+ +++EHGK +FIKL++V    + +G+R V FELNG+ RV+++KD++      A+PKA  ++ GSVGAPMPGVV+ V+VK G+ V  G PLLVLSAMKMET VASP  G V ++    GD++ G DL+ EID
Sbjct:   10 MEPYDFEAAEKELKEKYGADKIRDLDVISHAIYPDVFEGFMKFKDEFGSMHFLDTRSFLTGLEVDTEVEIQMEHGKTVFIKLIAVGGVSKKDGLRDVIFELNGRQRVIKVKDEAAGVTTTAKPKA-TSMAGSVGAPMPGVVLDVRVKKGEMVKAGSPLLVLSAMKMETVVASPVSGRVVSIHADVGDNMLGGDLLVEID 207          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A2D4BQS3_PYTIN (Putative carboxylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQS3_PYTIN)

HSP 1 Score: 191 bits (485), Expect = 4.110e-53
Identity = 95/198 (47.98%), Postives = 135/198 (68.18%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLGVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDE-EGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEID 197
            MPPY FD   + L  +YG  + + D++SHA YP VF ++M  +E++G +  LDTRTF+SG++ G+E+ + IEHGK +F+KL++V    + +G R V FELNG+ RV+++ D+        +PKA+  V GSVGAPMPGVV+ VKVK G +V  G PL+VLSAMKMET VA+P  G V ++L   GD++   DL+ E D
Sbjct:  617 MPPYDFDAAAKSLRKKYGEQIRDVDVLSHAIYPDVFDNYMKFKEQYGSMHFLDTRTFLSGLEVGREVELTIEHGKTIFLKLIAVGGVSKVDGTRDVIFELNGRQRVIKVTDQEAGVSTVTKPKANTAVAGSVGAPMPGVVLEVKVKPGQQVKAGSPLVVLSAMKMETVVAAPVGGKVTSILANVGDNMLAGDLLVEXD 814          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A2R5GAU7_9STRA (Pyruvate carboxylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAU7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.420e-52
Identity = 98/199 (49.25%), Postives = 136/199 (68.34%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYGLG-VTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDE-EGVRSVTFELNGQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEID 197
            M PY F+    QL  +YG   + E D++SHA YP VF DFM  + E G + + DT TF++G++  QE+++E+EHGK +F+KL++V    + +G R + FE+NG+ RV+R+ D+     +  RPKA A+V GSVGAPMPGVV+ V+VK G+ V  G PLLVLSAMKMET VA+P  G VKA+    GD++ G DL+ EID
Sbjct:  986 MEPYDFEAAQAQLEEKYGADKINELDVMSHALYPDVFDDFMKFKSEFGSMRVFDTHTFLTGLEVDQEVAIELEHGKTVFVKLIAVGGVSQKDGKRDIIFEMNGRQRVIRVADQQAGVSLAERPKAVASVPGSVGAPMPGVVLDVRVKQGEIVKAGTPLLVLSAMKMETVVAAPVSGRVKAIHTNVGDNMLGGDLLVEID 1184          
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Match: A0A1E7FM50_9STRA (Pyruvate carboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FM50_9STRA)

HSP 1 Score: 189 bits (481), Expect = 3.670e-52
Identity = 101/211 (47.87%), Postives = 139/211 (65.88%), Query Frame = 0
Query:    1 MPPYKFDNEMRQLHGQYG--------------LGVTERDLVSHAQYPAVFKDFMASREEHGDLSILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELNGQPRVVRIKDKSVAGDVKA-RPKADATVIGSVGAPMPGVVVGVKVKTGDRVTQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEI 196
            M P+ FDNE ++L  Q+G                + + D++S A YPAVF++FM  + ++G L+ LDTRTF++GMK G+E+ + +E GK L IKL++  +PD++G  ++ FELNG PR V +KDKS+ G+    RPKA     GSVGAPMPGVV+  KVK GD V  G PL+ LSAMKMET VASP  GVV+ ++V  G+ + G DL+ EI
Sbjct: 1061 MAPFDFDNERQKLEEQWGGDKTGGVGGHVRSGQNIRDVDVMSSALYPAVFEEFMTYKRDYGSLNFLDTRTFLTGMKVGEELEISLEPGKHLMIKLVARSEPDQDGHVTIQFELNGTPRTVSVKDKSLGGEAATERPKALKGDDGSVGAPMPGVVLETKVKKGDSVDVGSPLVSLSAMKMETMVASPVKGVVERVVVTAGEEVSGGDLLVEI 1271          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8443.16615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR8_ECTSI5.270e-10182.83Pyruvate carboxylase n=2 Tax=Phaeophyceae TaxID=28... [more]
A0A6H5L2A7_9PHAE6.680e-10182.32Pyruvate carboxylase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A4D9CY33_9STRA7.080e-6256.85Pyruvate carboxylase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A835YR17_9STRA1.080e-5763.10Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID... [more]
A0A836CLQ1_9STRA1.250e-5660.71Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID... [more]
K0S261_THAOC2.520e-5651.52Pyruvate carboxylase (Fragment) n=1 Tax=Thalassios... [more]
A0A662WMI8_9STRA5.470e-5447.24Lipoyl-binding domain-containing protein n=2 Tax=N... [more]
A0A2D4BQS3_PYTIN4.110e-5347.98Putative carboxylase n=1 Tax=Pythium insidiosum Ta... [more]
A0A2R5GAU7_9STRA1.420e-5249.25Pyruvate carboxylase n=1 Tax=Hondaea fermentalgian... [more]
A0A1E7FM50_9STRA3.670e-5247.87Pyruvate carboxylase n=1 Tax=Fragilariopsis cylind... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.100coord: 120..197
e-value: 6.5E-24
score: 85.5
NoneNo IPR availableGENE3D3.10.600.10coord: 57..115
e-value: 3.1E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR43778FAMILY NOT NAMEDcoord: 1..196
NoneNo IPR availableSUPERFAMILY89000post-HMGL domain-likecoord: 2..62
IPR003379Carboxylase, conserved domainPFAMPF02436PYC_OADAcoord: 1..80
e-value: 3.3E-14
score: 53.1
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 131..196
e-value: 8.8E-20
score: 70.3
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 128..197
score: 24.221
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..56
e-value: 2.2E-11
score: 45.2
IPR001882Biotin-binding sitePROSITEPS00188BIOTINcoord: 153..170
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 120..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8443contigS-dermatodea_contig8443:812..7351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8443.16615.1mRNA_S-dermatodea_contig8443.16615.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8443 740..9168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8443.16615.1 ID=prot_S-dermatodea_contig8443.16615.1|Name=mRNA_S-dermatodea_contig8443.16615.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=199bp
MPPYKFDNEMRQLHGQYGLGVTERDLVSHAQYPAVFKDFMASREEHGDLS
ILDTRTFVSGMKTGQEISVEIEHGKVLFIKLMSVQDPDEEGVRSVTFELN
GQPRVVRIKDKSVAGDVKARPKADATVIGSVGAPMPGVVVGVKVKTGDRV
TQGQPLLVLSAMKMETNVASPADGVVKALLVKDGDSIQGNDLVAEIDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003379Carboxylase_cons_dom
IPR000089Biotin_lipoyl
IPR013785Aldolase_TIM
IPR001882Biotin_BS
IPR011053Single_hybrid_motif