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Homology
BLAST of mRNA_S-dermatodea_contig8426.16595.1 vs. uniprot
Match: D7FJA1_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA1_ECTSI) HSP 1 Score: 176 bits (445), Expect = 2.380e-46 Identity = 194/228 (85.09%), Postives = 207/228 (90.79%), Query Frame = 1
Query: 511 MCHFPGAILRSGLVFERVAALSLSGQGIGDGDIPASVARLAGGSLRSVDVSKNRLTVVPPGLLELGGVLEELNLGDNEIAEMPPEIANLTGLRSFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELCRIAVNPGLTVVPEGLAFAERLAWVSLAGTGWCARATEKRRR 1194
MC PG +LRSGLVF+RV ALS+ GQGIGDGD+PASV RLAG LR VD+S NRLT VPPGLL LG LE+LNLG+N+IAEMPPEIA L GL FNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LCR+AVNPGLTVVPEGL +AE+LAWVSLAG+ WCARA+EKRRR
Sbjct: 1 MCLLPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAG-VLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDIAEMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRR 227
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Putative Leucine Rich Repeat Protein Kinase |
| Ec32 ortholog | Ec-12_008310.1 |
| Exons | 4 |
| Model size | 1197 |
| Cds size | 1197 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8426.16595.1 >prot_S-dermatodea_contig8426.16595.1 ID=prot_S-dermatodea_contig8426.16595.1|Name=mRNA_S-dermatodea_contig8426.16595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=399bp
SAGGGGGGGAGEGGETKSSNTNTNGNGRFENIPTCSCNSPSTATSAATAA AASAAAVAATALVRRAAHGGTAKAAAAGTPRRGRHDRRSELNGNRRRRSR TREGSGGSVAAGAAASLAGGASVGLASVGLGRKASAGGGSAVNAAAVEAA AAAEVAARGATVVSVTSLRRMCHFPGAILRSGLVFERVAALSLSGQGIGD GDIPASVARLAGGSLRSVDVSKNRLTVVPPGLLELGGVLEELNLGDNEIA EMPPEIANLTGLRSFNMAGNRLTRVPPEVGKLSALRRLGLKGNALVRLPS TIGDLSHLVELYLTGNILEALPNEIVKLRRLKKLQLSFNNLRSLPPGMEG LRGLELCRIAVNPGLTVVPEGLAFAERLAWVSLAGTGWCARATEKRRR* back to topmRNA from alignment at S-dermatodea_contig8426:4254..9051+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8426.16595.1 ID=mRNA_S-dermatodea_contig8426.16595.1|Name=mRNA_S-dermatodea_contig8426.16595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4798bp|location=Sequence derived from alignment at S-dermatodea_contig8426:4254..9051+ (Saccorhiza dermatodea SderLu1190fm monoicous) AGCGCCGGCGGAGGCGGGGGCGGGGGCGCCGGGGAGGGGGGCGAAACAAA
ATCCTCCAACACCAACACCAACGGGAACGGGAGGTTCGAAAACATCCCTA
CTTGCTCCTGCAACTCCCCCTCCACGGCCACCTCCGCGGCTACCGCGGCC
GCCGCATCTGCCGCCGCCGTCGCGGCCACCGCGCTGGTGCGACGAGCCGC
GCACGGCGGGACGGCGAAGGCGGCAGCCGCCGGCACCCCTAGACGAGGCC
GCCACGACCGCCGCTCGGAGCTCAACGGTAACCGCAGACGGCGCTCGAGA
ACCCGGGAGGGGTCGGGCGGCTCCGTGGCGGCGGGGGCTGCCGCGTCTCT
CGCCGGGGGGGCTTCGGTTGGGCTTGCCTCTGTGGGATTGGGGAGGAAGG
CGTCCGCCGGTGGCGGGTCCGCCGTGAATGCCGCGGCAGTGGAAGCTGCG
GCCGCGGCGGAGGTGGCCGCTAGGGGGGCTACGGTCGTGTCGGTGACCTC
GCTGCGTCGCATGTGTCACTTTCCCGGGGCGATCCTGAGGTCTGGGCTGG
TTTTCGAGAGGGTGGCGGCGTTATCGTTGTCGGGGCAGGGGATAGGGGAC
GGGGATATCCCGGCTTCGGTGGCGAGGCTGGCGGGGGGGAGTCTACGGAG
CGTGGACGTTAGCAAGAACAGGCTTACCGTTGTGCCGCCGGGGCTGTTGG
AGCTGGGCGGGGTTTTGGAGGAGCTTAATCTGGGGGACAACGAGATCGCG
GAGATGCCTCCAGAGGTACGTATCATACGGCAAGGCAGACGCTGTAGTTA
GAGCAGGCCTTGTTTTTTCCTTTTTCTTTTGTTGCTGGTGCGTTAAGACA
TTTTGGCAGGTTGTCCCCCTGCGTAGGAGGGTCATACCGGTAGCCAGCTC
CAAGTCCGAGTATGAATGCGATTTCTCTTGGAATGTTTTTGCATTTTTTG
GTTCTGCGACAACCAGGAAATCGAAATACGTTTTAGTTTAGCCAATCGTT
TGCAAGTTCTAGAATCAAAAATTGGAGTGCGACCTTTGCATACACGCCGG
GGAAAGTAGAGAGCGTTTATCATCGGGGACTCGGTTGTCGCTACGGGCTA
TTTATCATCCCCCGAACAGGCAGCACTCCTCTTCATACTTGTTGGAGGCG
CTTTTTAGGATAAGAACTAGCGAATTCCCGCGTGAGGCCACAAGAGTCTG
TGGGAAGGAGTCCGAGGCGTGGTTAACTTATTCATTCTTGCACTGTAGCG
AGGAGACTCGCTTTTTTTTTTTTTCTGGTTCGTGGGAAGACCAGGCCGTT
ATAACTCCGTTCTTGTTCGTGGTTCCGTCTGTCGTTGACGCTCCGTCGGC
AGTGGGAACCCCCAGGATGGATGTGCAGACCGGGGATAGATGTATGGACG
GTCTTGGAAATTTGTTCTCGACACACGTTTTTTTTTTGTGCTGACCCTTG
TTTCGAAGCATGGGGGTGGTCTTGCAATGTTTTACGCTCATCGAACTGAG
CTTGCCGCTGCCGCCGTGCTTGCGCTCGGCCCCCCACCCCGTTTTCGAGC
AGATCGCAAACCTGACCGGCCTGCGGAGTTTCAATATGGCCGGGAATCGC
CTCACGAGGGTCCCTCCCGAGGTCGGGAAGCTGTCGGCGCTTCGCCGGCT
AGGGCTGAAGGGGAACGCCCTCGTGCGGCTGCCGTCGACCATCGGGGATC
TGTCGCATTTGGTAGAGCTGTACCTAACGGGGAACATCCTTGAGGCCCTG
CCCAACGAGGTGGGTTTTTGTTCACGACTGGGTGGCGTGTTTGGTGAGGA
GGGGGGCGGGGGGGGGGGGGTATTCGTGTTTTGCATGCCTTTGCTGTTAA
GACCATTGACCACGCGTCCCCGAGGAGCACTGTTCCCACAGGATCGTTTC
ATTGCCGATGGCCAATCGTTCCTTCCTACTTTGCCAAAGGTGGTGCAATT
TTTATTTATTTTATATCGCGTCTCCCGCAATTTCTTGCCTTCTCGGGCCA
CTTCTTATCCCCCAGTATCATTATTATTATTAATAGTAGTAACCGCCCTC
GTCTAGCTGTCCTCTGCTTCAAAAGCATCTCTTACATCACCATCGTCAAC
ATATCACAGTTTACATCGTTCTACTTTCCTCGATTAAATCATGTACACTT
CTCTCTTCCTTATCCCACAGAGTGGGCACTCGGCCACTGCTGCCAATTCA
TGAGCACGGCGTTCCCACGCGTCCAAACCGCAAGTACATTTTGGGTATGC
ATAGGGGGCCCAAGCGTCCGAGCGTCGTGGCGTCTCAAAACCCCTCGATC
CGCGCCGCACATTTGTTTCAGTTTTAATTTTTTAATTTTTTGTTCTTGCT
TTTCCGTTTCGTTTAATCCTCTTGTTGATCTGTTTGTTTTCGTCGCGTGG
GATATGTATGCATATATATATACGGCGGTCGCCGGCAGATCGTGAAGCTG
CGGCGCTTGAAGAAGCTGCAGCTGTCGTTCAACAACTTGCGCTCGCTTCC
GCCGGGGATGGAGGGCCTCCGTGGCCTGGAGCTGTGCAGGTGTGTGCGGT
CGTGCCCGTTTTTGCGGTGTTGGGAGCACAGGAGGCGTTTTTCGGGTGGG
CTCCCTTCGTGGTCGTTGCGTGGCGGCGGCGTTGGCCGTTGTCTTTACAT
CCCGCTCGTTTGTGGAGGGCAGGTATGTACATGTCATTCCGCCTCAGTTT
GGAACCGATTTCCGTGTTTTTGGGGCCCACCTACCTGAATCTGCCTGCAT
CTGCCTGCATCCGCCTGAATCCGCCTGCACCGTCTTCGCGTCGAACAACT
CTGTACAAGTGCCCAACCCCGGGTTTACCCTAGCCGCAGTGGCGGCAAAG
CGACGCCGTGACACGCTCTGCTTGCACGCACGGCGGCGATGGTGGTTGTG
GTGGTGTGCTTGTGCTCGGGTGTTGACATCCCTAACGGGTGTTGACATCC
CTAACCACCGCGATGCGATAATACCATCCCTACCCGCACTGACGTTTTCT
CGGTTTTCTCGCGAAAAAACGGACTCACACCCGAAAGGGCTGAATAGGTA
GATCCCGACTGCTTCGGACAGTTAGTTCCATGCCCTCTTCTGGTTTACGC
CGTTGCAGGAGTCGTTGGGCCCCCCTGAAAACACAAAATTTCTTGCGCCC
CTCGCCCCCGCCCCCCTCCCGCTCCCTCCCCCCACTCCCCCGCGCGCCCC
CTCCTCCTCGTTGCTTCGCTGGCAAGAAGATCCCCTCGACCCTCGGCCTC
CACGAGTCCAAAGGATTTCGAGCCCTGGCCACCTTCAACGGCGCGTTGCA
TAGATCTAGGCGTTGCGCCGACACTCTCTCGTTGAGAGCAAAATTTATTC
AATCAGGGGCCTTCACATGCCCGGCAATTACCTGCGTCTTTTCACATTTC
CATGCTCACATCCATGTCCATGTCCATGTCCCATGTCCCATGTCCATGTC
CCATGTTTATGTCCCATATCCATCTGGTCCAGAACCGGTTTTCAGTTTGG
CACTCCTGTCTGAACTTTTTGTCTGTCCTAACCTGGACTGGTTCCGCAAT
TGTCATATTTTCTGGACATAATGCTATTAATAGAGGGCCGAACAGGTCAA
AAGAGCTCGCGGTCGTGTGACATTCTCTGTTTTTTTGTATTTGTCCGAGT
TAACCCGCGTGGTTGTGACCGCCGATGGAATTGTCCAACAGCTCTTGCCA
TGAACAGCTCAGCTGCAATTTGTAGCTGCCTGCTCTTGTTGGTTGTTGAC
TCACACCACACAAATATTGTGCCGAAAGTCTCTCTCCTTTTCTTTTTTTT
TCCGCTTGAACGAGCTTTTGGATCTTCATAGGATATGTATTTCCCATTAA
AACACGCATTACCCGAGGATTACACATGCCCGTATCCAGTGCCGGTTTTC
TGGTCGGTCCTGTCCAAATTTATCTTGTCTTCAACAGGGCCTGGTTCAGC
CCTGTCCGAACCTTTAGTTGCCTAGCCGGCACTTGATCGGCGCTGTGAAG
TATTTTAGCCGGTACTGGTTCGACACTGTGAGAAATTCCTGGGCATGTGA
AAACCCTTGATTCGTTCCAGCCAAGCTACAGTATATCAGTGGAGCAAGGC
TCTGCCGATCCGTGTTTGGCATATTTTGGTCTCCCCACCCACCCCTATAC
CCCATCCCCCTACCCCGGCCGCCCCCCGTAAAGGCAATAAAAAAATAAAA
AAACGTACCTTTGTAAAGGGGGCATTTAGACAAACCCTTTTCGTCGGTTG
AAGTATTTCTGGTGTACCGGTACTATAATACGTGGATGATTCCGTGATGT
GTTTTCTCGATTTTCTCGACTTTTCATCCGACCACGAGCGGGATCGGCAA
ACAATTGGCGGGCCGTGCCGGGCCGGTCAGCTGTAAGTGTGGTGATCAAT
CAATCAATCAATCAATCAATCCATGAAGCAGTTAACCAATCAGTCAATCA
ATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAAATCAACTAAA
TTGGAGCAAGATGGCCTAGGCTGTCCGCCCTAAACATACTTTTTTGAGTG
CGAGCTATCCCCATGTATAGAAGTAGTACTGCAACACCTTACAGAAAAGC
AAGTGTATTATAACATGATCATGTCATGACGCCCTACCTTCCGCACGCCG
CGCTTTCTGTCCCTCTGTGTCCAGGATCGCCGTTAACCCCGGGCTGACCG
TTGTGCCGGAGGGGCTGGCCTTTGCGGAGCGTCTGGCGTGGGTGTCCCTC
GCTGGTACTGGGTGGTGCGCACGAGCTACGGAAAAGCGCCGCAGGTGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8426:4254..9051+ >mRNA_S-dermatodea_contig8426.16595.1 ID=mRNA_S-dermatodea_contig8426.16595.1|Name=mRNA_S-dermatodea_contig8426.16595.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2394bp|location=Sequence derived from alignment at S-dermatodea_contig8426:4254..9051+ (Saccorhiza dermatodea SderLu1190fm monoicous) AGCGCCGGCGGAGGCGGGGGCGGGGGCGCCGGGGAGGGGGGCGAAACAAA ATCCTCCAACACCAACACCAACGGGAACGGGAGGTTCGAAAACATCCCTA CTTGCTCCTGCAACTCCCCCTCCACGGCCACCTCCGCGGCTACCGCGGCC GCCGCATCTGCCGCCGCCGTCGCGGCCACCGCGCTGGTGCGACGAGCCGC GCACGGCGGGACGGCGAAGGCGGCAGCCGCCGGCACCCCTAGACGAGGCC GCCACGACCGCCGCTCGGAGCTCAACGGTAACCGCAGACGGCGCTCGAGA ACCCGGGAGGGGTCGGGCGGCTCCGTGGCGGCGGGGGCTGCCGCGTCTCT CGCCGGGGGGGCTTCGGTTGGGCTTGCCTCTGTGGGATTGGGGAGGAAGG CGTCCGCCGGTGGCGGGTCCGCCGTGAATGCCGCGGCAGTGGAAGCTGCG GCCGCGGCGGAGGTGGCCGCTAGGGGGGCTACGGTCGTGTCGGTGACCTC GCTGCGTCGCATGTGTCACTTTCCCGGGGCGATCCTGAGGTCTGGGCTGG TTTTCGAGAGGGTGGCGGCGTTATCGTTGTCGGGGCAGGGGATAGGGGAC GGGGATATCCCGGCTTCGGTGGCGAGGCTGGCGGGGGGGAGTCTACGGAG CGTGGACGTTAGCAAGAACAGGCTTACCGTTGTGCCGCCGGGGCTGTTGG AGCTGGGCGGGGTTTTGGAGGAGCTTAATCTGGGGGACAACGAGATCGCG GAGATGCCTCCAGAGAGCGCCGGCGGAGGCGGGGGCGGGGGCGCCGGGGA GGGGGGCGAAACAAAATCCTCCAACACCAACACCAACGGGAACGGGAGGT TCGAAAACATCCCTACTTGCTCCTGCAACTCCCCCTCCACGGCCACCTCC GCGGCTACCGCGGCCGCCGCATCTGCCGCCGCCGTCGCGGCCACCGCGCT GGTGCGACGAGCCGCGCACGGCGGGACGGCGAAGGCGGCAGCCGCCGGCA CCCCTAGACGAGGCCGCCACGACCGCCGCTCGGAGCTCAACGGTAACCGC AGACGGCGCTCGAGAACCCGGGAGGGGTCGGGCGGCTCCGTGGCGGCGGG GGCTGCCGCGTCTCTCGCCGGGGGGGCTTCGGTTGGGCTTGCCTCTGTGG GATTGGGGAGGAAGGCGTCCGCCGGTGGCGGGTCCGCCGTGAATGCCGCG GCAGTGGAAGCTGCGGCCGCGGCGGAGGTGGCCGCTAGGGGGGCTACGGT CGTGTCGGTGACCTCGCTGCGTCGCATGTGTCACTTTCCCGGGGCGATCC TGAGGTCTGGGCTGGTTTTCGAGAGGGTGGCGGCGTTATCGTTGTCGGGG CAGGGGATAGGGGACGGGGATATCCCGGCTTCGGTGGCGAGGCTGGCGGG GGGGAGTCTACGGAGCGTGGACGTTAGCAAGAACAGGCTTACCGTTGTGC CGCCGGGGCTGTTGGAGCTGGGCGGGGTTTTGGAGGAGCTTAATCTGGGG GACAACGAGATCGCGGAGATGCCTCCAGAGATCGCAAACCTGACCGGCCT GCGGAGTTTCAATATGGCCGGGAATCGCCTCACGAGGGTCCCTCCCGAGG TCGGGAAGCTGTCGGCGCTTCGCCGGCTAGGGCTGAAGGGGAACGCCCTC GTGCGGCTGCCGTCGACCATCGGGGATCTGTCGCATTTGGTAGAGCTGTA CCTAACGGGGAACATCCTTGAGGCCCTGCCCAACGAGATCGCAAACCTGA CCGGCCTGCGGAGTTTCAATATGGCCGGGAATCGCCTCACGAGGGTCCCT CCCGAGGTCGGGAAGCTGTCGGCGCTTCGCCGGCTAGGGCTGAAGGGGAA CGCCCTCGTGCGGCTGCCGTCGACCATCGGGGATCTGTCGCATTTGGTAG AGCTGTACCTAACGGGGAACATCCTTGAGGCCCTGCCCAACGAGATCGTG AAGCTGCGGCGCTTGAAGAAGCTGCAGCTGTCGTTCAACAACTTGCGCTC GCTTCCGCCGGGGATGGAGGGCCTCCGTGGCCTGGAGCTGTGCAGATCGT GAAGCTGCGGCGCTTGAAGAAGCTGCAGCTGTCGTTCAACAACTTGCGCT CGCTTCCGCCGGGGATGGAGGGCCTCCGTGGCCTGGAGCTGTGCAGGATC GCCGTTAACCCCGGGCTGACCGTTGTGCCGGAGGGGCTGGCCTTTGCGGA GCGTCTGGCGTGGGTGTCCCTCGCTGGTACTGGGTGGTGCGCACGAGCTA CGGAAAAGCGCCGCAGGTGAGATCGCCGTTAACCCCGGGCTGACCGTTGT GCCGGAGGGGCTGGCCTTTGCGGAGCGTCTGGCGTGGGTGTCCCTCGCTG GTACTGGGTGGTGCGCACGAGCTACGGAAAAGCGCCGCAGGTGA back to top
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