mRNA_S-dermatodea_contig841.16581.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: D7G0Y8_ECTSI (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y8_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.310e-118 Identity = 176/239 (73.64%), Postives = 199/239 (83.26%), Query Frame = 1
Query: 4 SGADVFLASFEPTFSDYLNETVGEVY-SVGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMTDQDLVPEWPLQAMPHVPADLVKAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLR 717
+G + FL SFEPTFS YLN+TVGEVY VGFIAVPLAFD+VWDAVS+A+VDFLFLNP SASCME FGVS++LSLRN RQG EL FGGV+ITAANR+DITE+AH++DK+VEGVS++GLGAFQLQWGLL+D G NLM D EVR AYNQKKIVYDVI EN DVGFVRTDMVERMDAA DLVPEWPLQA+ HVP+DL K V+ AL+ +N TH AA SG YSTWD PLSY+ LR
Sbjct: 16 TGTEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDDVWDAVSSASVDFLFLNPGSASCMESEFGVSAILSLRNFRQGNELNLFGGVVITAANRSDITEVAHLQDKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKIVYDVINENVDVGFVRTDMVERMDAA--------DLVPEWPLQALSHVPSDLAKEVVGALLLINETHEAAVSGGYSTWDVPLSYADLR 246
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A7S3YSR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSR5_9EUKA) HSP 1 Score: 268 bits (686), Expect = 4.140e-80 Identity = 144/317 (45.43%), Postives = 207/317 (65.30%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYS--VGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMT---------------------DQDLVPEWPLQAMPHVPAD--LVKAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLRLVK--LGILDYDAR----QCLESENVYGAIVCPTGFFKLSEEIVDSQCSDLASEH 864
GA F F PTF DYLN+ VG +++ + F ++PL F + V +DF++ NPS+ SC++ FG S+VL+LRNLR+G EL +FGG++ T AN +IT+++ +KDK VE VSI+GLGA Q+QW L+ + G+NLMVDP++VR A+NQKKIV+DV + DVGFVRTDM+E MDA GE +++ L PEW L A+PH+ +D +V+ V+ ALM N++ + + YSTW PLSY LR ++ LG + D +C+ S+++YGAIVCP+G+FKL+ EIV+ QC+ L SE+
Sbjct: 55 GAADFEKRFSPTFRDYLNQEVGPLFNPPITFESLPLNFSSTFTRVEAGTIDFVYTNPSAFSCLDSEFGASAVLTLRNLRRGQELTQFGGIIFTRANNTNITQLSDLKDKKVEAVSISGLGAAQMQWRLMTEKGMNLMVDPAQVRFAFNQKKIVHDVRRGDVDVGFVRTDMIEGMDANGETSLSYFKVIHKQNITYEGSPFPFQISTRLYPEWSLGALPHMNSDYKVVEEVINALMRTNSSSNCSKAAGYSTWQHPLSYMPLREMQQALGWIQQDPVTSNWKCMRSDDLYGAIVCPSGYFKLAREIVEQQCNVLGSEY 371
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA) HSP 1 Score: 257 bits (657), Expect = 1.470e-75 Identity = 141/311 (45.34%), Postives = 194/311 (62.38%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYS--VGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEIN---------------------MTDQDLVPEWPLQAMPHVPADLV--KAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLRLVKLG---ILDYDA---RQCLESENVYGAIVCPTGFFKLSEEIVDSQCS 846
G F A F PTFS YL ETVG ++ + F ++ L F + V A+VDF++ NPS+ SC+E F VS++++LRN RQG EL FGG++ T ++ +I IA ++ KIVE VSI+GLGA Q+QW LL+D G +LM P +VR A+NQKKIV DV+ NADVGFVRTDM+E M + GE+N ++ +L PEW L +PHV D + + V ALM+++ H AA +G YSTW PPLSY L ++ I+ + R C+ S N+Y AIVCP G+FKLS+++V SQC+
Sbjct: 48 GPTDFHARFSPTFSTYLTETVGPQFNPPIRFESIALDFSSTFTQVEQASVDFIYTNPSAFSCLESEFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKGYSLMTLPKQVRFAFNQKKIVLDVLNGNADVGFVRTDMIEGMASKGEVNISSFKVIHQQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSERVAFALMDIHKDHWAAKNGTYSTWQPPLSYMRLNEMQEDLNWIIKNETTGKRMCIRSSNLYDAIVCPDGYFKLSQDVVSSQCN 358
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A7S4CND3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CND3_9EUGL) HSP 1 Score: 214 bits (546), Expect = 2.230e-66 Identity = 102/182 (56.04%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYSVGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMTD 552
GA F+ +EPT++ YLNETVG+ ++ F AVP+ F E +D V + A+DF++ NPS+ SC+E +GV+ ++SLRN R+G+ L +FGG + T +NR DI I ++DKIVE VSITGLGA Q+QW L+ + G+N +VDP++V A+NQKKIV DVIA NADVGFVRTDM E MD+AGEIN++D
Sbjct: 7 GAADFMKRWEPTYATYLNETVGKALNISFEAVPMNFAETFDLVGSKAIDFIYTNPSAFSCVESEYGVAPIVSLRNFRKGFTLNQFGGTIFTRSNRTDINTIHDLRDKIVEAVSITGLGACQMQWRLMIEKGINFLVDPAQVVFAFNQKKIVRDVIAGNADVGFVRTDMAEGMDSAGEINISD 188
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A7S1T0N3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0N3_9CHLO) HSP 1 Score: 223 bits (568), Expect = 5.120e-66 Identity = 124/303 (40.92%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYSVG-FIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMTDQDLV------------------PEWPLQAMPHVPADLVKAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLRLVKLGILDYDARQCLESENVYGAIVCPTGFFKLSEEIVDSQCSDLAS 858
G + A + TFS YL T G F V L FD ++A + VD L++NPS SC+E +FG + +L N R+GY+L F G + T ++R DI + +K KIVE VSI+GLGA QLQW L NGV+ ++DP +VR +YNQ+ IV DVIA +ADVG VRTD+ E M A G IN+TD ++ PEWPL ++PH ++++ VM A+++L + H AA G YS W P+SY + + + +C+ SE+ Y AIVCP KL E V C+D A+
Sbjct: 45 GEETLFAQWNATFSTYLTATAGAALGGRTFQLVYLDFDTAYEAAQHGCVDILYVNPSMYSCLELQFGAAVFATLINFRRGYDLDRFYGTIFTRSDREDIRTVEDLKGKIVEAVSISGLGACQLQWHELLLNGVDFLIDPKQVRFSYNQELIVQDVIAGHADVGMVRTDLAEGMAAEGLINITDIRVINQKDDTDFPFPYSTRLAAPEWPLASLPHTSIEVIEEVMYAVLQLESDHEAAVQGLYSGWRLPVSYLGMHQMMSKLNWIQNGECIRSEDTYDAIVCPEHHVKLPREKVAEACADQAA 347
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: D7G0S2_ECTSI (Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S2_ECTSI) HSP 1 Score: 192 bits (487), Expect = 3.520e-58 Identity = 96/154 (62.34%), Postives = 116/154 (75.32%), Query Frame = 1
Query: 409 MVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMTDQDLVPEWPLQAMPHVPADLVKAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLRL--VKLGILDYDARQCLESENVYGAIVCPTGFFKLSEEIVDSQCSDLASEH 864
M D EVR YNQ+KIVYDVI N DVGFVRTDMV+ MDAA DLVPEWPLQA PHVP+DLVK V+ ALM +N TH AA SG YSTWD PLSY+ LR V+LG+LD + C++SENVYGA+VCP GFFK++E + DS+C++L S++
Sbjct: 1 MADTEEVRFTYNQEKIVYDVINGNIDVGFVRTDMVQLMDAA--------DLVPEWPLQAFPHVPSDLVKEVVRALMLINETHEAAVSGGYSTWDVPLSYADLRTLQVQLGVLDSEQGHCIQSENVYGAVVCPEGFFKIAENLFDSKCTELGSKY 146
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: F2UDV5_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDV5_SALR5) HSP 1 Score: 199 bits (507), Expect = 2.740e-54 Identity = 117/310 (37.74%), Postives = 175/310 (56.45%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYS--VGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEI------------NMTDQD----------LVPEWPLQAMPHVPADLVKAVMVALMELNNTHPAATSGAYSTWDPPLSYSSLRLVK--LGILDYDAR---QCLESENVYGAIVCPTGFFKLSEEIVDSQCSD 849
G D F F+ FS YL T G ++ V F A+P+AF + ++VS +DF + NP+ SC+E ++ +L++RN R G+EL F GV+ TAA+R DI + V+ K + GVS+T LG FQ+Q+G+L G+ LM D + V + N ++ V+DV+ AD+GFVRTD +E M A+G I ++T + L PEWP A P V + +AVM AL LN + P + G Y+ W P SY SLR ++ LG+L+ + +C + E++Y ++VCP GF S E D+ C +
Sbjct: 42 GVDYFEEHFKEGFSTYLTNTAGRTFNPPVTFNAIPVAFSDFVNSVSKGELDFTYCNPTLFSCIESGEEMAPLLTVRNFRLGHELTVFAGVIFTAASRDDINTLEDVRGKRLSGVSMTSLGGFQMQYGMLHVAGIELMTDFAMVAFSSNHRQTVHDVLEGAADIGFVRTDTIEGMIASGAIEADSLKVLNARESLTPEGTKFPFVHSTPLYPEWPFGAHPSVDWQVQEAVMKALQSLNASSPTSVQGQYAEWQPGFSYISLRNLQEELGLLEETSTGRFECRQGEDLYSSLVCPVGFVLKSREEFDTACEE 351
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A813FKL4_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FKL4_POLGL) HSP 1 Score: 191 bits (484), Expect = 3.330e-51 Identity = 110/303 (36.30%), Postives = 167/303 (55.12%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYSVGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAG--------EINMTDQD---------LVPEWPLQAMPHVPADLVKAVMVALMELNNTHP------AATSGAYSTWDPPLSYSSLRLVKLGILDYDA--RQCLESENVYGAIVCPTGFFKLSEEIVDSQ 840
G +VF F PTF YL + + + F+A+PL FD+ +D V + +DF++ NP++ +CM F +++V SL N R+G L +F GV+ AN ++ +++ V VSI+GLGA QLQ L G N+M D + NQ + V DV + ADVGFVRTDM++ + A+G +N D PEWP+ A+ HVP D+ + V+ ALM+L+ P A G++STW PP++Y L + I YD R+CL + +VY A+ CP+G+ K S+++ Q
Sbjct: 59 GDEVFNQKFGPTFQTYLTTVLNASHGLEFVALPLNFDQNFDYVGASELDFIYSNPAAYTCMMVEFDLTTVASLMNFRKGNSLDKFAGVMFALANASEFNNTQDLRNARVSAVSISGLGAMQLQQAELLKQGFNIMTDTKRLTFTGNQGQTVQDVQSGYADVGFVRTDMIDSLVASGLTQWEYFKVLNEIPDDTFPFKRSTGFTPEWPIGALGHVPNDVKELVLRALMDLDRDSPNPLLSEPAIQGSFSTWVPPMNYLGLLSMLESISYYDPSQRKCLRNSDVYQAVACPSGYVKQSQDVAFCQ 361
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A813LHZ3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LHZ3_POLGL) HSP 1 Score: 185 bits (470), Expect = 2.240e-50 Identity = 108/303 (35.64%), Postives = 163/303 (53.80%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYSVGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAAGEINMT-----------------DQDLVPEWPLQAMPHVPADLVKAVMVALMELNNTHP------AATSGAYSTWDPPLSYSSLRLVKLGILDYDA--RQCLESENVYGAIVCPTGFFKLSEEIVDSQ 840
GA F SF PTF YL + + + F+A+PL FD+ +D V + +DF++ NP++ +CM F +++V S+ N R+G L +F GV+ AN ++ +++ V VSI+GLGA QLQ L + G N+M D + NQ KIV DV + ADVGFVRTD++ A+G + PEWP+ A+ HVP ++ + V ALM+L+ P A +G +STW PP++Y L + I YD R+CL + +VY AI CP+G+ S+++ Q
Sbjct: 66 GAAAFNKSFGPTFQTYLTTVLNASHGLEFVALPLNFDQNFDYVRASELDFIYSNPAAYTCMMVEFKLTTVASMMNFRKGNSLDKFAGVIFARANASEFNNTQDLRNARVSAVSISGLGAMQLQQAELLEQGFNIMTDVKRLTFTGNQNKIVQDVQSGYADVGFVRTDLISGNVASGLTKWEYFKVLNEIPDGTFPFKRSTNFTPEWPIGALGHVPNEVKELVGRALMDLDRNSPNPLLSEPAINGGFSTWVPPMNYMDLLSMLESISYYDPSQRKCLRNSDVYQAIACPSGYVTQSQDVAFCQ 368
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Match: A0A812RNW9_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RNW9_9DINO) HSP 1 Score: 186 bits (471), Expect = 1.900e-49 Identity = 114/300 (38.00%), Postives = 167/300 (55.67%), Query Frame = 1
Query: 7 GADVFLASFEPTFSDYLNETVGEVYSVGFIAVPLAFDEVWDAVSNAAVDFLFLNPSSASCMERRFGVSSVLSLRNLRQGYELGEFGGVLITAANRADITEIAHVKDKIVEGVSITGLGAFQLQWGLLEDNGVNLMVDPSEVRLAYNQKKIVYDVIAENADVGFVRTDMVERMDAA-----------GEINMTD------QDLVPEWPLQAMPHVPADLVKAVMVALMELNNTHP------AATSGAYSTWDPPLSYSSL--RLVKLGILDYDARQCLESENVYGAIVCPTGFFKLSEEIV 831
GA F S PTF DYL + Y + F ++PL F++ ++ V VDF++ NP++ +CM F + +V SL N R+G LG+F GV+ T + T + +++ IVE VSI+GLGA QLQ L G+++M D + A+NQ KIV DV ADVGFVRTD+++R AA G+I TD D PEWP+ A+PHV A++ + V +LM L+ P A +G +++W P++Y L L + D D ++CL S + Y AI CP+GF K + + V
Sbjct: 513 GAAAFETSLGPTFKDYLTRRLNASYGLEFESIPLDFNQNFEFVGAGQVDFIYSNPAAYTCMAVEFNLRTVASLINYRKGNALGQFAGVIFTRHDSPFHT-VDDLRNAIVEAVSISGLGAMQLQQAELLSQGLDIMTDVPRLVFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAANKTKWEYFRVIGQIADTDFPFARSTDFTPEWPIGALPHVHAEVTELVARSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGLLDMLRSIQYYDQDRKKCLRSSDEYEAINCPSGFVKKARDKV 811 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig841.16581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig841.16581.1 >prot_S-dermatodea_contig841.16581.1 ID=prot_S-dermatodea_contig841.16581.1|Name=mRNA_S-dermatodea_contig841.16581.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=288bp FSGADVFLASFEPTFSDYLNETVGEVYSVGFIAVPLAFDEVWDAVSNAAVback to top mRNA from alignment at S-dermatodea_contig841:17758..20598- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig841.16581.1 ID=mRNA_S-dermatodea_contig841.16581.1|Name=mRNA_S-dermatodea_contig841.16581.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2841bp|location=Sequence derived from alignment at S-dermatodea_contig841:17758..20598- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig841:17758..20598- >mRNA_S-dermatodea_contig841.16581.1 ID=mRNA_S-dermatodea_contig841.16581.1|Name=mRNA_S-dermatodea_contig841.16581.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at S-dermatodea_contig841:17758..20598- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |