prot_S-dermatodea_contig8389.16560.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8389.16560.1
Unique Nameprot_S-dermatodea_contig8389.16560.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length332
Homology
BLAST of mRNA_S-dermatodea_contig8389.16560.1 vs. uniprot
Match: D7FQQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ7_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 3.280e-127
Identity = 222/338 (65.68%), Postives = 257/338 (76.04%), Query Frame = 0
Query:    1 MTTAGQRLTAVMEILVKEMVRQSSTRSCAPSSVSIATLRDAKGRRRRPSDQTSTTSLELQRSTGTTCGKSTGGLDAEE----GEILAATGAK-EGQKSPLSMVGGMSTNLLSGGRGDRSAAGETGGGVKERGKTTPLQVGTGGSRSIIGARTDR-QDTTRKVRTSSAKRIHGHSSPPKGGRRSRDAGAVMSKFQFSKDSIRRHQRSRESWIPEDLRMKMMRRSMRVIEENVFENVAQCSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMETSRLRKKQEHVAREKEREYWDPLRKAS 332
            M  AGQRLTAVME+LV+E+ ++   RS APSSVSIA+LRD+KGRRR+  ++  +TSLEL RS G    KS G + A +     +I A +  K  G +S L   GG  ++   GGRG  S   E  G  KER K +PLQ   G SR  +GART+  ++  RK  TSSAKR HGHSSP KG R S  AG V++KFQFSKD+IRR Q S ESWIP+DLRMKM+RR M VI+ENVFE+VA  S+VRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDME SR+RKK+E +AREKEREYWDPLRKA+
Sbjct:    1 MAPAGQRLTAVMEVLVRELAQERIVRSRAPSSVSIASLRDSKGRRRQVGNRHMSTSLELPRSLGANLSKSVGDVAATDTGTFSDISAGSIPKTSGHQSALKAEGGSGSDSPPGGRGGGSTMTEAAGDSKERCKMSPLQGKMGASRKNLGARTEGGREVPRKHHTSSAKRGHGHSSPLKGNRAS-SAGGVLNKFQFSKDAIRRQQMSHESWIPDDLRMKMVRRGMAVIKENVFESVAHGSVVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLAREKEREYWDPLRKAT 337          
BLAST of mRNA_S-dermatodea_contig8389.16560.1 vs. uniprot
Match: A0A836CGB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.040e-27
Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 0
Query:  181 GAVMSKFQFSKDSIRRHQRSRESWIPEDLRMKMMRRSMRVIEENVFENVAQCSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK-------------------------------------VCAFCSQLFHDPLGYRPTWDMETSRLRKKQEHVAREKEREYWDPLR 329
            G   +K       +R+ Q S+ESWIP DLRMKM+RRS+  + ++V E  A   +  K+  +++R+ LEI K QE+FG +  RPCALCEQ FS VNLVLAVP+K                                     VCAFCSQ F +P  YRPT +M+ + L+  +     ++E+ YWDPLR
Sbjct:  224 GEARAKPMVKASDVRKPQLSQESWIPIDLRMKMLRRSISAVADSVSETAAWEKVRTKQAAKNARTSLEIAKEQERFGRECPRPCALCEQVFSSVNLVLAVPYKAIMDVREHWHEKAPHRLGPPKASHNMKRPPQCYNEVRVCAFCSQQFSEPATYRPTQEMKAAALKDAEAKEEADREKAYWDPLR 409          
BLAST of mRNA_S-dermatodea_contig8389.16560.1 vs. uniprot
Match: A0A7S2LA26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA26_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.860e-7
Identity = 53/174 (30.46%), Postives = 81/174 (46.55%), Query Frame = 0
Query:  174 GRRSRDAGAVMSKFQFSKDSIRRHQRSRESWIPEDLRMKMMRRSMRVIEENVFENVAQC-SLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK--------------------------------------VCAFCSQLFHDPLG-YRPTWDMETS 307
            GR+ R   A ++    + +S +R  +SRESWIPEDLR +M++R   V + N +E   +C S   +E +R     LE  +++EK+G + +R C LC++     NLVLAV  K                                      VC FC+QLF +    YRP+W  + +
Sbjct:  229 GRKGRRQSAPINVHLINSNSDQRA-KSRESWIPEDLRRRMLKREFSVAKMN-YETREKCQSSNLRELQRCKSDALEKSRSKEKYGIEIKRNCGLCDRPHLSENLVLAVTLKACLDIRDSWGCKYDPEGSSRVRVNPNLRKAPACYNETRVCVFCAQLFDNQQEKYRPSWQAKVA 400          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8389.16560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQQ7_ECTSI3.280e-12765.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGB7_9STRA1.040e-2739.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2LA26_9STRA2.860e-730.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8389contigS-dermatodea_contig8389:505..3907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8389.16560.1mRNA_S-dermatodea_contig8389.16560.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8389 505..3907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8389.16560.1 ID=prot_S-dermatodea_contig8389.16560.1|Name=mRNA_S-dermatodea_contig8389.16560.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=332bp
MTTAGQRLTAVMEILVKEMVRQSSTRSCAPSSVSIATLRDAKGRRRRPSD
QTSTTSLELQRSTGTTCGKSTGGLDAEEGEILAATGAKEGQKSPLSMVGG
MSTNLLSGGRGDRSAAGETGGGVKERGKTTPLQVGTGGSRSIIGARTDRQ
DTTRKVRTSSAKRIHGHSSPPKGGRRSRDAGAVMSKFQFSKDSIRRHQRS
RESWIPEDLRMKMMRRSMRVIEENVFENVAQCSLVRKEKKRSSRSELEIV
KTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRP
TWDMETSRLRKKQEHVAREKEREYWDPLRKAS
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