prot_S-dermatodea_contig8363.16538.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8363.16538.1
Unique Nameprot_S-dermatodea_contig8363.16538.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length66
Homology
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.180e-34
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0
Query:    2 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGFRTKSVNMDFWALHEVARMTSMGNVKV 64
            CADCDAELTDYGNIWASV+QGCFVCVHCLAVHRSLGFRTKSVNMDFWA+ EVARMTSMGNVKV
Sbjct:    9 CADCDAELTDYGNIWASVDQGCFVCVHCLAVHRSLGFRTKSVNMDFWAVDEVARMTSMGNVKV 71          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.740e-13
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    2 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLG--FRTKSVNMDFWALHEVARMTSMGNVK 63
            C DCDAELTD  NIWASV+ GCFVCV+C  VH  L      KSV MD W   E+  + +MGNV+
Sbjct:  256 CCDCDAELTDLRNIWASVKIGCFVCVNCKQVHELLEPPLPCKSVYMDAWLDDELETVKAMGNVR 319          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: I0YZW3_COCSC (Arf GTPase activating protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW3_COCSC)

HSP 1 Score: 60.8 bits (146), Expect = 2.830e-10
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    2 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGN 61
            CADC+A     G  WASV  GCF+C++C  VHRSLG    + +S  +D W   +VA   SMGN
Sbjct:   31 CADCNAR----GPTWASVNLGCFICLNCSGVHRSLGVHCSKVRSTTLDTWLPEQVAFAQSMGN 89          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A1A0HCY0_9ASCO (Arf GTPase activating protein (Fragment) n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HCY0_9ASCO)

HSP 1 Score: 54.7 bits (130), Expect = 7.010e-8
Identity = 27/66 (40.91%), Postives = 35/66 (53.03%), Query Frame = 0
Query:    1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 63
            SC DC +        WAS   GCF+C+ C  +HRS+G    R KSV++D W   +V  M   GN K
Sbjct:   30 SCVDCKSAQHPR---WASWNLGCFICIRCSGIHRSMGTHISRVKSVDLDVWTDEQVESMIKWGNEK 92          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A2P7YMF3_9ASCO (Arf-GAP domain-containing protein n=3 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YMF3_9ASCO)

HSP 1 Score: 57.0 bits (136), Expect = 7.070e-8
Identity = 30/66 (45.45%), Postives = 36/66 (54.55%), Query Frame = 0
Query:    1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 63
            SCADC    T     WAS   GCFVC+ C  +HRS+G    R KSV++D W   +V  M   GN K
Sbjct:   29 SCADCK---TAQHPRWASWNLGCFVCIRCSGIHRSMGTHISRVKSVDLDAWTDEQVELMLKWGNAK 91          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A0J8B0I0_BETVV (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0I0_BETVV)

HSP 1 Score: 54.7 bits (130), Expect = 7.290e-8
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 0
Query:    1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 64
            +CADC+++       WAS+  GCF+C+ C  +HRS+G    + +SV +D W    V  M   GN KV
Sbjct:   20 TCADCNSKQPR----WASINLGCFICIRCSGIHRSVGVHISKVRSVTLDEWQPAWVDNMEKWGNKKV 82          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: C5M592_CANTT (Uncharacterized protein n=1 Tax=Candida tropicalis (strain ATCC MYA-3404 / T1) TaxID=294747 RepID=C5M592_CANTT)

HSP 1 Score: 56.2 bits (134), Expect = 1.210e-7
Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 0
Query:    1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 63
            SCADC +        WAS   GCF+C+ C  VHRS+G    + KSV++D W   +V  M   GN K
Sbjct:   34 SCADCKSSKNPR---WASWSLGCFICIRCSGVHRSMGTHISKVKSVDLDAWTDDQVENMVRWGNQK 96          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A0H5RBK5_9EUKA (Arf-GAP domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBK5_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.330e-7
Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 0
Query:    2 CADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 64
            CADC  +       WAS+  GCF+C+ C  +HRS+G    + +SV +D W    VA M + GN KV
Sbjct:   21 CADCSTKQPR----WASINIGCFICIRCSGIHRSIGVHISKVRSVTLDEWQPAWVANMENWGNKKV 82          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A5DYQ7_LODEL (Uncharacterized protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DYQ7_LODEL)

HSP 1 Score: 56.2 bits (134), Expect = 1.330e-7
Identity = 27/66 (40.91%), Postives = 36/66 (54.55%), Query Frame = 0
Query:    1 SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVK 63
            SCADC    T     WAS   GCF+C+ C  +HRS+G    + KSV++D W   ++  M   GN K
Sbjct:   38 SCADCK---TTKNPRWASWNLGCFICIRCSGIHRSMGTHISKVKSVDLDAWTDEQIENMVKWGNEK 100          
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Match: A0A1Y2H0J7_9FUNG (Arf-GAP domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H0J7_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 1.540e-7
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
Query:   16 WASVEQGCFVCVHCLAVHRSLGF---RTKSVNMDFWALHEVARMTSMGNVKV 64
            WAS   GCF+C+ C  VHRS+G    + KSV++D W   +V  M   GN KV
Sbjct:   43 WASFNIGCFMCIRCSGVHRSMGTHISKVKSVDLDSWTAEQVENMIKWGNGKV 94          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8363.16538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU92_ECTSI1.180e-3495.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CKZ6_9STRA2.740e-1356.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I0YZW3_COCSC2.830e-1047.62Arf GTPase activating protein n=1 Tax=Coccomyxa su... [more]
A0A1A0HCY0_9ASCO7.010e-840.91Arf GTPase activating protein (Fragment) n=1 Tax=M... [more]
A0A2P7YMF3_9ASCO7.070e-845.45Arf-GAP domain-containing protein n=3 Tax=Metschni... [more]
A0A0J8B0I0_BETVV7.290e-838.81Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
C5M592_CANTT1.210e-742.42Uncharacterized protein n=1 Tax=Candida tropicalis... [more]
A0A0H5RBK5_9EUKA1.330e-740.91Arf-GAP domain-containing protein n=1 Tax=Spongosp... [more]
A5DYQ7_LODEL1.330e-740.91Uncharacterized protein n=1 Tax=Lodderomyces elong... [more]
A0A1Y2H0J7_9FUNG1.540e-746.15Arf-GAP domain-containing protein n=1 Tax=Lobospor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 40..61
score: 33.23
coord: 22..39
score: 43.49
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 2..65
e-value: 5.6E-15
score: 55.4
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..66
score: 15.081
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..66
e-value: 9.4E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR45705FAMILY NOT NAMEDcoord: 1..65
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8363contigS-dermatodea_contig8363:9028..9225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8363.16538.1mRNA_S-dermatodea_contig8363.16538.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8363 9028..9225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8363.16538.1 ID=prot_S-dermatodea_contig8363.16538.1|Name=mRNA_S-dermatodea_contig8363.16538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=66bp
SCADCDAELTDYGNIWASVEQGCFVCVHCLAVHRSLGFRTKSVNMDFWAL
HEVARMTSMGNVKVRS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO