prot_S-dermatodea_contig8318.16503.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8318.16503.1
Unique Nameprot_S-dermatodea_contig8318.16503.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length175
Homology
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BLAST of mRNA_S-dermatodea_contig8318.16503.1 vs. uniprot
Match: A0A6H5K6L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L4_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 7.190e-5
Identity = 23/28 (82.14%), Postives = 25/28 (89.29%), Query Frame = 0 
Query:    1 GIDEHAGPSLHRVQATGAFQRYRTVAAG 28
            G+D+HAG SLHRVQATGAFQRYR  AAG
Sbjct:   34 GVDDHAGASLHRVQATGAFQRYRAFAAG 61
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8318.16503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K6L4_9PHAE7.190e-582.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8318contigS-dermatodea_contig8318:4344..4868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8318.16503.1mRNA_S-dermatodea_contig8318.16503.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8318 4344..4869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8318.16503.1 ID=prot_S-dermatodea_contig8318.16503.1|Name=mRNA_S-dermatodea_contig8318.16503.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=175bp
GIDEHAGPSLHRVQATGAFQRYRTVAAGGRAEAVNARLSQDPPAPKTTAV
EAGEAFRPRGRSVGIPGSPGDDHDANGAVPSAKGDTNGGDDCEGTGGDSP
GAERGGVGDATAAATAVGDGEAVPAAVEQGASYANEIRRRKWRGAEQELL
PLAPEQRATLKRALSALRETADDGD
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