prot_S-dermatodea_contig830.16486.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig830.16486.1
Unique Nameprot_S-dermatodea_contig830.16486.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length101
Homology
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BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Match: A0A6H5L0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.410e-11
Identity = 39/56 (69.64%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:   48 SHHVLQATPGDRAFKP--LPNLAQAEFPKLRDEPYDLVVLGSGPGGEAAAVQAARL 101
            S HVL+      A K   LP+LAQ EFP L D+PYDLVVLGSGPGGEAAAVQAARL
Sbjct:   34 SEHVLERKKHVLAAKRDVLPDLAQQEFPPLPDKPYDLVVLGSGPGGEAAAVQAARL 89
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BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Match: A0A7S1TRI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRI9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.640e-7
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:   64 LPNLAQAEFPKLR--DEPYDLVVLGSGPGGEAAAVQAARL 101
            LP+L+Q +FP +   DEPYDLVV+GSGPGGEAAA +AA+L
Sbjct:   74 LPDLSQKDFPPVPPDDEPYDLVVIGSGPGGEAAATRAAQL 113
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BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Match: A0A7S2Y1R6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1R6_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.320e-6
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:   64 LPNLAQAEFPKLRDEPYDLVVLGSGPGGEAAAVQAARL 101
            LP+L+QA FP+ R EPYDL+V+G GPGGEAAAV AA+L
Sbjct:   44 LPDLSQASFPE-RYEPYDLLVIGCGPGGEAAAVNAAKL 80
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BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Match: A0A7R9U251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U251_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.560e-5
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   64 LPNLAQAEFPKLR--DEPYDLVVLGSGPGGEAAAVQAARL 101
            LP+L+Q +FP +   DEP+DLVV+GSGPGGEAAA +AA L
Sbjct:   73 LPDLSQKDFPPVPPDDEPFDLVVVGSGPGGEAAAARAAAL 112
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BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Match: A0A836CAQ8_9STRA (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ8_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.110e-5
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:   64 LPNLAQAEFPKLRDEPYDLVVLGSGPGGEAAAVQAARL 101
            L +L+Q+ FP + ++ YDLVVLGSGPGGEA A +AA+L
Sbjct:    4 LRDLSQSAFPDVPEDGYDLVVLGSGPGGEAIATRAAQL 41
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig830.16486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L0D3_9PHAE2.410e-1169.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TRI9_9STRA2.640e-767.50Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2Y1R6_9STRA3.320e-671.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U251_9STRA1.560e-565.00Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A836CAQ8_9STRA3.110e-560.53Pyr_redox_2 domain-containing protein (Fragment) n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 74..101
e-value: 2.3E-5
score: 26.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig830contigS-dermatodea_contig830:4698..8627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig830.16486.1mRNA_S-dermatodea_contig830.16486.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig830 4698..8689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig830.16486.1 ID=prot_S-dermatodea_contig830.16486.1|Name=mRNA_S-dermatodea_contig830.16486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp
MRKFVLFLSLAELSIAFRPLAHSGGRPTRPQQSQDPATSSSSSTRPGSHH
VLQATPGDRAFKPLPNLAQAEFPKLRDEPYDLVVLGSGPGGEAAAVQAAR
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf