mRNA_S-dermatodea_contig8238.16429.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8238.16429.1
Unique NamemRNA_S-dermatodea_contig8238.16429.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6H5L6M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M3_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.600e-88
Identity = 165/233 (70.82%), Postives = 174/233 (74.68%), Query Frame = 1
Query:   31 IATTTLLVFVRCCRGY-YVSP-CMLPASSTL--------------LRRCSTSSPSFLQGRSPTRSLSTSLSAAR---APMVGPAPPPAAPTAPLFDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD-HGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            IA  TLLV     RGY YV+P CML   S                L RCS+ S          +   TSL+  R   APM+GP  PPA P   L+DADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD   VRTVEGELETALWKAGAIADSNYGDL KIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT +GMSQYGKDKLNE+LPDDIRCFSVSKVPKSFRGR+ECTLR
Sbjct:   11 IAIKTLLVGRCFVRGYAYVAPSCMLSRFSQQRHRQLQSAGLSILPLNRCSSGS----------KRGGTSLTGVRKPRAPMIGPELPPAPPPPTLYDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTDAQNVRTVEGELETALWKAGAIADSNYGDLNKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTAAGMSQYGKDKLNENLPDDIRCFSVSKVPKSFRGREECTLR 233          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: D8LDS4_ECTSI (Pseudouridylate synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS4_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.030e-85
Identity = 138/154 (89.61%), Postives = 142/154 (92.21%), Query Frame = 1
Query:  211 MVGPAPPPAAPTAPLFDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD-HGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            M+GP  PPA P   L+DADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD   VRTVEGELETALWKAGAIADSNYGDL KIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT +GMSQYGKDKLNE LPDDIRCFSVSKVPKSFRGR+ECTLR
Sbjct:    1 MIGPELPPAPPPPTLYDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTDAQNVRTVEGELETALWKAGAIADSNYGDLNKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTATGMSQYGKDKLNEKLPDDIRCFSVSKVPKSFRGREECTLR 154          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A835YLA7_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.630e-39
Identity = 81/148 (54.73%), Postives = 96/148 (64.86%), Query Frame = 1
Query:  268 GNELSKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSR--------------TDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            G E     KRKVA+V+GYVGT F G Q   + GVRTVE E+ETAL+ AG I +SNYGDL+KIGW RTSR              TDKGVHA+KTV  AKLL+ Q  F  +G++   K  +N  LP D+R FSV KVPK FRGR EC+ R
Sbjct:    7 GEEKGGVAKRKVALVLGYVGTDFSGLQIDRNSGVRTVESEMETALFNAGVIKESNYGDLSKIGWSRTSRIPLDGFVNIAYASRTDKGVHAAKTVVVAKLLVDQTQFCAAGLNAPLKAAINACLPPDLRVFSVCKVPKGFRGRGECSWR 154          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6A5AFW9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFW9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.220e-34
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 1
Query:  271 NELSKPTKRKVAIVVGYVGTAFHGWQ-QSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT-ESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            +E  K  K KVA+V GY GT +HG Q Q     V T+E E+  AL+KAG I +SNYGD++KIGW R+SRTDKGVHAS  V + KLL+  +     SG   +   ++N HLP DIR F+ +KV +SFR R++C LR
Sbjct:   31 DEPGKKRKVKVALVTGYTGTGYHGVQIQENAVDVPTIEHEVRAALFKAGCILESNYGDMSKIGWSRSSRTDKGVHASSIVLSGKLLVQDDRIDPRSGRIAHLPAEINAHLPADIRVFTATKVHQSFRAREDCILR 165          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A1V9Y8S5_9STRA (Ubiquitin fusion degradation protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8S5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.080e-33
Identity = 68/131 (51.91%), Postives = 90/131 (68.70%), Query Frame = 1
Query:  280 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYG-KDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            +K  K K A+V GY+GT FHG Q    + V T+E EL  AL+ AG I++SNY D+ KIGW R+SRTDKGVHAS  V +AKLL+ +++  ES     G  + LN+HLPD IR F+ +KV +SFR R++C LR
Sbjct:   18 AKKRKVKAALVSGYLGTGFHGVQLQEHNNVPTIEQELRNALFAAGCISESNYADMAKIGWSRSSRTDKGVHASCIVFSAKLLVDEDSIDESTGRLIGLPEALNKHLPDTIRMFTATKVHRSFRAREDCLLR 148          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A067C0B2_SAPPC (PseudoU_synth_1 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0B2_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 8.440e-33
Identity = 68/131 (51.91%), Postives = 90/131 (68.70%), Query Frame = 1
Query:  280 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYG-KDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            +K  K KVA+V GY+GT +HG Q    +GV TVE E+  AL+KAG I +SN  DL+KIGW R+SRTDKGVHAS  V +AKLL+  ++  E+     G  + +N HLP  IR F+ +KV +SFR R++CTLR
Sbjct:   19 AKKRKVKVALVSGYLGTGYHGVQLQDTNGVPTVENEVRAALFKAGCILESNLADLSKIGWSRSSRTDKGVHASCIVFSAKLLVDSDSINETDGRLRGLPEAINAHLPPSIRMFTATKVHQSFRAREDCTLR 149          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6G0WDH2_9STRA (PseudoU_synth_1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDH2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.880e-32
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 1
Query:  271 NELSKPTKRKVAI--VVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            NE  +  KRKV +  V+GY GT +HG Q    + V T+E E+ +AL+KAG I +SNYGD++KIGW R+SRTDKGVHA+  V +AKLL+ +E   + +G      + +N HLP++IR F+ +KV +SFR R+EC +R
Sbjct:   27 NEFKEDKKRKVKVGLVMGYTGTGYHGVQIQEKNDVPTIEHEVRSALFKAGCILESNYGDMSKIGWSRSSRTDKGVHATSIVVSAKLLVHEERIDKKTGRIAQLVEDINVHLPENIRVFTATKVHQSFRAREECIMR 162          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A024U417_9STRA (tRNA pseudouridine(38-40) synthase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U417_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.900e-31
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1
Query:  274 ELSKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            E  K  K KVA+V GY GT +HG Q   +  V TVE  +  AL+KAG I +SNYGD++KIGW R+SRTDKGVHAS  V + KLL+        SG   +  D++N +LP DIR F+ +KV +SFR R++C LR
Sbjct:   31 ESGKKRKVKVALVTGYTGTGYHGVQIQENVNVPTVEHAVREALFKAGCILESNYGDMSKIGWSRSSRTDKGVHASSIVLSGKLLVHGNRIDPVSGRIAHLPDQINAYLPQDIRVFTATKVHQSFRAREDCILR 163          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A485KC76_9STRA (Aste57867_2617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC76_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.780e-31
Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 1
Query:  280 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            +K  K KV +V GY GT +HG Q   +  V T+E ++  AL+KAG I +SNY D++KIGW R+SRTDKGVHA+  V +AKLL+ ++     +G   +  D++N HLPD +R FS +KV +SFR R+EC LR
Sbjct:   20 AKKRKVKVGLVTGYTGTGYHGVQIQENGDVPTIEYDVREALFKAGCILESNYADMSKIGWSRSSRTDKGVHATAIVLSAKLLVHEDRIDPVTGRIAHLVDEVNAHLPDAVRVFSATKVHQSFRAREECILR 150          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A1V9Z3D6_9STRA (Ubiquitin fusion degradation protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3D6_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.890e-31
Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 1
Query:  280 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTES-GMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 669
            +K  K KVA+V GY+GT FHG Q    +GV TVE  L +AL+KAG I DSN+ D+ KIGW R+SRTDKGVHAS  V + KLL+  ++  E+ G  +   + +N HLP+ +R F+ +KV +SFR R++C LR
Sbjct: 1118 AKKRKVKVALVSGYLGTGFHGVQLQDRNGVPTVEDTLRSALFKAGCIRDSNFDDMNKIGWSRSSRTDKGVHASIIVFSGKLLVDDDSIDEATGRLRGLPETINAHLPETVRIFTATKVHQSFRAREDCLLR 1248          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6M3_9PHAE1.600e-8870.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDS4_ECTSI2.030e-8589.61Pseudouridylate synthase, putative n=1 Tax=Ectocar... [more]
A0A835YLA7_9STRA8.630e-3954.73Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6A5AFW9_9STRA1.220e-3450.37Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1V9Y8S5_9STRA3.080e-3351.91Ubiquitin fusion degradation protein n=1 Tax=Thrau... [more]
A0A067C0B2_SAPPC8.440e-3351.91PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A6G0WDH2_9STRA1.880e-3248.53PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A024U417_9STRA1.900e-3150.38tRNA pseudouridine(38-40) synthase n=1 Tax=Aphanom... [more]
A0A485KC76_9STRA2.780e-3148.85Aste57867_2617 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9Z3D6_9STRA2.890e-3150.38Ubiquitin fusion degradation protein n=1 Tax=Achly... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8238contigS-dermatodea_contig8238:163..1928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.9
Seed ortholog evalue2.1e-72
Seed eggNOG ortholog2880.D8LDS4
Preferred namePUS1
KEGG koko:K06173,ko:K14016,ko:K20674
KEGG Pathwayko04141,ko04624,map04141,map04624
KEGG ModuleM00400,M00403
GOsGO:0000049,GO:0000959,GO:0000963,GO:0001522,GO:0002153,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003727,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009891,GO:0009893,GO:0009982,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0019219,GO:0019222,GO:0030374,GO:0031119,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0070525,GO:0070900,GO:0070902,GO:0071704,GO:0080090,GO:0090304,GO:0090646,GO:0097159,GO:0106029,GO:0140053,GO:0140098,GO:0140101,GO:0140110,GO:1900864,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990481,GO:2000112,GO:2001141
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0101@1,KOG2553@2759
EC5.4.99.12
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03016
Hectar predicted targeting categorysignal peptide
Exons2
Model size669
Cds size669
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925330.4055796-CDS-S-dermatodea_contig8238:162..3671622925330.4055796-CDS-S-dermatodea_contig8238:162..367Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 163..367 -
1694079860.047337-CDS-S-dermatodea_contig8238:162..3671694079860.047337-CDS-S-dermatodea_contig8238:162..367Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 163..367 -
1622925330.4200964-CDS-S-dermatodea_contig8238:1464..19281622925330.4200964-CDS-S-dermatodea_contig8238:1464..1928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 1465..1928 -
1694079860.0629253-CDS-S-dermatodea_contig8238:1464..19281694079860.0629253-CDS-S-dermatodea_contig8238:1464..1928Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8238 1465..1928 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8238.16429.1prot_S-dermatodea_contig8238.16429.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8238 163..1928 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8238.16429.1

>prot_S-dermatodea_contig8238.16429.1 ID=prot_S-dermatodea_contig8238.16429.1|Name=mRNA_S-dermatodea_contig8238.16429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=223bp
MLVDRRPYCLIATTTLLVFVRCCRGYYVSPCMLPASSTLLRRCSTSSPSF
LQGRSPTRSLSTSLSAARAPMVGPAPPPAAPTAPLFDADGNELSKPTKRK
VAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTK
IGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPD
DIRCFSVSKVPKSFRGRDECTLR
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mRNA from alignment at S-dermatodea_contig8238:163..1928-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8238.16429.1 ID=mRNA_S-dermatodea_contig8238.16429.1|Name=mRNA_S-dermatodea_contig8238.16429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1766bp|location=Sequence derived from alignment at S-dermatodea_contig8238:163..1928- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTTGTGGACCGGAGGCCATACTGCCTAATTGCGACCACCACGCTCTT GGTATTCGTTCGTTGCTGTCGTGGCTACTACGTCTCACCGTGCATGCTCC CTGCATCCTCGACGCTTCTGAGACGTTGTTCAACCTCATCACCATCATTC CTGCAGGGGCGAAGCCCCACGCGCAGCCTCAGCACCTCGCTATCTGCAGC GCGAGCTCCCATGGTAGGCCCCGCCCCCCCTCCAGCTGCGCCAACTGCGC CGCTCTTCGATGCCGATGGCAACGAGCTTAGTAAGCCCACGAAACGCAAG GTGGCCATCGTTGTGGGCTACGTCGGGACCGCGTTTCATGGCTGGCAGCA GAGCACTGACCATGGAGTGAGGACTGTGGAGGGGGAGCTAGAGACGGCCC TGTGGAAGGCTGGAGCGATCGCCGACAGCAACTACGGCGACCTGACGAAG ATCGGCTGGGGCAGGTGAGGAAGCGAGCTCTGCGCTTCTGTTCTTTTGGC TGCGAGGGGTTTTGTCTTACGGAGGTTTTTATCTTGTGGTGTCTGTTGAC GTTCTTCCCAAGGAAGGTTGGGTTGATGTACCACTATCATTGTATCTATA CAGTACATAGCCTATAACCCTACCCTTACGATATGCATAGATAGCTCCAG CATGTTGTACATTTACGTGCATGTTCTACTTTATACCGACACTGCCGCAC AGTTTGGGTGGCGATGTGCAGCGGCAGTCGCAGCCTTTCATGAGTCGCCA GACGGACAAGGCTGTGCGTATTGGTCAGTTTGGTCGGGCTTGGGGCGTGT GCGATTTGTAGGCAGCGTCGATGATGGCTCTCGGGGGGCTTGGGTCAAAG ACGTGCTTTGCGGTCGTCGATCATGCACGGATGGAGGCATCGATCGATGC GATCCCCTGCTGGGCGAAAGTCCCGTGAGCAGCTTGTGCTTTGTTGGGGT TTGTCCTGTGATGGCAGGCAGTATATTGTCACTCGTTCATTCTTCTTGGA ACATGATTCCTGGTTCATGACCAAGCGAAAAGGGTTTGGGCAGAAATGCT CGGTGTTCGACGTTATCGCGGTCCTGCCCTCGGTCAATGGCTTTATGAAC CCCATTGCCTTGATGCTCCTGTAGCTCTCCTCTTGAAGCCCAACGGACGC TTGCTTTGTGGCGCGAACCGCACGCTAAACCCAACACGGCCACCCGCGCT GTCATCAACTCGGACCATACGCAAAAGCACGAAAGAGACCTCTCGCGACT CGCGACCGCAGTTGACCGGGGGGCCGTCATCTACTGAAATTCTGCCATCA TATATTTATGTTCCTCCGTGGCGACGGAGCCCGCTGCATACCGCAAAAAA CGCAGAAACCTTTGTACAAGTACACAGGTTAAAAAGCTCTGTACAAGTAT TGACATTATATCGTATGACTCTTTTATCGCACGGTCTGATTAAATCCTCC GTCTGATTAAATCCTCCCTCTGATTAAATCCTGCGTGAAATCAACAGCAC TTGCGACTCGTCTCCACCTTCTCCCGCAAAAAAAAATACACACACACACA CACACACGCAGAACGAGCCGGACCGATAAGGGCGTGCACGCCTCCAAGAC GGTGGCGGCGGCCAAGCTGCTACTGCCGCAGGAAACCTTCACCGAATCTG GGATGTCGCAGTACGGCAAGGACAAGCTTAACGAGCACCTGCCCGACGAT ATCCGGTGCTTCAGCGTGTCAAAGGTGCCCAAGTCGTTCCGTGGCCGGGA CGAGTGCACGCTCAGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8238:163..1928-

>mRNA_S-dermatodea_contig8238.16429.1 ID=mRNA_S-dermatodea_contig8238.16429.1|Name=mRNA_S-dermatodea_contig8238.16429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at S-dermatodea_contig8238:163..1928- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTTGTGGACCGGAGGCCATACTGCCTAATTGCGACCACCACGCTCTT
GGTATTCGTTCGTTGCTGTCGTGGCTACTACGTCTCACCGTGCATGCTCC
CTGCATCCTCGACGCTTCTGAGACGTTGTTCAACCTCATCACCATCATTC
CTGCAGGGGCGAAGCCCCACGCGCAGCCTCAGCACCTCGCTATCTGCAGC
GCGAGCTCCCATGGTAGGCCCCGCCCCCCCTCCAGCTGCGCCAACTGCGC
CGCTCTTCGATGCCGATGGCAACGAGCTTAGTAAGCCCACGAAACGCAAG
GTGGCCATCGTTGTGGGCTACGTCGGGACCGCGTTTCATGGCTGGCAGCA
GAGCACTGACCATGGAGTGAGGACTGTGGAGGGGGAGCTAGAGACGGCCC
TGTGGAAGGCTGGAGCGATCGCCGACAGCAACTACGGCGACCTGACGAAG
ATCGGCTGGGGCAGATGCTTGTGGACCGGAGGCCATACTGCCTAATTGCG
ACCACCACGCTCTTGGTATTCGTTCGTTGCTGTCGTGGCTACTACGTCTC
ACCGTGCATGCTCCCTGCATCCTCGACGCTTCTGAGACGTTGTTCAACCT
CATCACCATCATTCCTGCAGGGGCGAAGCCCCACGCGCAGCCTCAGCACC
TCGCTATCTGCAGCGCGAGCTCCCATGGTAGGCCCCGCCCCCCCTCCAGC
TGCGCCAACTGCGCCGCTCTTCGATGCCGATGGCAACGAGCTTAGTAAGC
CCACGAAACGCAAGGTGGCCATCGTTGTGGGCTACGTCGGGACCGCGTTT
CATGGCTGGCAGCAGAGCACTGACCATGGAGTGAGGACTGTGGAGGGGGA
GCTAGAGACGGCCCTGTGGAAGGCTGGAGCGATCGCCGACAGCAACTACG
GCGACCTGACGAAGATCGGCTGGGGCAGAACGAGCCGGACCGATAAGGGC
GTGCACGCCTCCAAGACGGTGGCGGCGGCCAAGCTGCTACTGCCGCAGGA
AACCTTCACCGAATCTGGGATGTCGCAGTACGGCAAGGACAAGCTTAACG
AGCACCTGCCCGACGATATCCGGTGCTTCAGCGTGTCAAAGGTGCCCAAG
TCGTTCCGTGGCCGGGACGAGTGCACGCTCAGGAACGAGCCGGACCGATA
AGGGCGTGCACGCCTCCAAGACGGTGGCGGCGGCCAAGCTGCTACTGCCG
CAGGAAACCTTCACCGAATCTGGGATGTCGCAGTACGGCAAGGACAAGCT
TAACGAGCACCTGCCCGACGATATCCGGTGCTTCAGCGTGTCAAAGGTGC
CCAAGTCGTTCCGTGGCCGGGACGAGTGCACGCTCAGG
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