mRNA_S-dermatodea_contig82132.16410.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A060IKX1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Bodanella lauterborni TaxID=246119 RepID=A0A060IKX1_9PHAE) HSP 1 Score: 285 bits (729), Expect = 1.310e-95 Identity = 134/154 (87.01%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 46 VDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
VDPSPWPL A+GVLSMTLGAVM MNNFSGGYRLFCVGI +L ++ WWRDVIREAVFEGHHTFAVQ GLRLGMILFIVSE+MFFFAFFWAFFASSLSPVFNIGGVWPP GLEVISPWGLP LNTL+LLSS A VTWAHHAIVGGY TNAIDG
Sbjct: 1 VDPSPWPLTAAMGVLSMTLGAVMFMNNFSGGYRLFCVGILTVLFVMFSWWRDVIREAVFEGHHTFAVQNGLRLGMILFIVSEIMFFFAFFWAFFASSLSPVFNIGGVWPPAGLEVISPWGLPFLNTLLLLSSGASVTWAHHAIVGGYKTNAIDG 154
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A7I6P3F8_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=10 Tax=Dictyotaceae TaxID=2874 RepID=A0A7I6P3F8_9PHAE) HSP 1 Score: 260 bits (664), Expect = 1.120e-85 Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 25 HRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
HRHPFH+VDPSPWP+V +IG LS+T G VM M+N+SGG +L C+G+ IL + WWRD+IREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG A G
Sbjct: 7 HRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLCLGVITILYVMITWWRDIIREASFEGQHTSAVQEGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTG 167
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A5K7TM11_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=15 Tax=Chorda TaxID=45033 RepID=A0A5K7TM11_9PHAE) HSP 1 Score: 258 bits (659), Expect = 9.950e-85 Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 1
Query: 22 IHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
+ RHPFH+VDPSPWPLV ++G LS+T G V+ M+N+ GG L C+G+ IL ++ WWRDVIREA+FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SS+SPVFNIGGVWPP G+E ISPWGLP LNT++LLSS A VTWAHHAIVGG+ A+ G
Sbjct: 8 VQRHPFHLVDPSPWPLVASLGGLSLTFGGVLFMHNYKGGGELLCLGVITILYVMFTWWRDVIREALFEGQHTLAVQQGLRLGMILFIVSEVMFFFAFFWAFFTSSVSPVFNIGGVWPPTGIEAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEALQG 169
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A0U5B4J4_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U5B4J4_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.320e-84 Identity = 115/160 (71.88%), Postives = 136/160 (85.00%), Query Frame = 1
Query: 28 RHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
RHPFH+VDPSPWPLV A+G LS+T G V+ M+N+SGG +L +G+ IIL ++ WWRD+IREA+FEGHHT AVQ+GLR+GMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP GL+ ISPWGLP NT++L+SS A VTWAHHAIVGG+ A+ G
Sbjct: 10 RHPFHLVDPSPWPLVAALGGLSLTFGGVLFMHNYSGGGKLLSLGVLIILYVMFTWWRDIIREALFEGHHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGLDAISPWGLPFFNTILLISSGASVTWAHHAIVGGFKKEALIG 169
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A499U4C2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Myriogloea sp. NZ TaxID=2185083 RepID=A0A499U4C2_9PHAE) HSP 1 Score: 257 bits (656), Expect = 2.260e-84 Identity = 113/164 (68.90%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 16 RTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
+ I RHPFH+VDPSPWPLV A+G LS+T G V+ M+N+ GG L C+G+ +L ++ WWRDVIREA+FEG HT AVQ+GLR+GMILFI+SEVMFFFAFFWAFFASS+SPVFNIGGVWPP G+ ISPWGLP LNT++LLSS A VTWAHHAIVGG+ ++G
Sbjct: 6 KMIQRHPFHLVDPSPWPLVAALGGLSLTFGGVLFMHNYEGGKELLCLGVLTVLYVMFTWWRDVIREALFEGQHTLAVQQGLRMGMILFIISEVMFFFAFFWAFFASSVSPVFNIGGVWPPTGITAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEGMEG 169
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A0U1V199_SARFS (Cytochrome c oxidase subunit 3 n=199 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V199_SARFS) HSP 1 Score: 258 bits (658), Expect = 3.200e-84 Identity = 118/169 (69.82%), Postives = 138/169 (81.66%), Query Frame = 1
Query: 1 MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
M + +T+ RHPFH+VDPSPWP V A+G LS T G V+ M+N+ GG +L C+G+ IL ++ WWRDVIREA FEG HT AVQ+GLR+GMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP G+E ISPWGLPLLNT+ILLSS A VTW+HHAIVGG+ A+ G
Sbjct: 1 MREQAKTVQRHPFHLVDPSPWPFVAALGGLSSTFGGVLYMHNYDGGGQLLCLGLITILYVMFTWWRDVIREASFEGQHTAAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGIEAISPWGLPLLNTIILLSSGASVTWSHHAIVGGFKREALLG 169
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX76_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=5 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX76_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.200e-84 Identity = 117/158 (74.05%), Postives = 133/158 (84.18%), Query Frame = 1
Query: 25 HRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNA 498
HRHPFH+VDPSPWPLV ++G LS+T G VM M+NFSGG +L +G+ IL ++ WWRD+IREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLE+ISPWGLPLLNT++LLSS A VTW HHAIVGG A
Sbjct: 4 HRHPFHLVDPSPWPLVASLGALSLTFGGVMFMHNFSGGVQLLLLGVITILYVMFAWWRDIIREASFEGQHTGAVQEGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPSGLEIISPWGLPLLNTILLLSSGATVTWCHHAIVGGLKQEA 161
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX66_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=26 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX66_9PHAE) HSP 1 Score: 256 bits (655), Expect = 4.910e-84 Identity = 120/164 (73.17%), Postives = 133/164 (81.10%), Query Frame = 1
Query: 16 RTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 507
R HRHPFH+VDPSPWPLV +IG LS+T G VM M+N+ GG +L +G+ IL + WWRD+IREA FEG HT AVQ GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG A G
Sbjct: 11 RVSHRHPFHLVDPSPWPLVASIGALSLTFGGVMFMHNYLGGGQLLLIGVITILYVMITWWRDIIREAAFEGQHTSAVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTG 174
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE) HSP 1 Score: 257 bits (656), Expect = 5.650e-84 Identity = 119/161 (73.91%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGG 483
MI + HRHPFH+VDPSPWP+V +IG LS+T G VM M+N+SGG +L +G+ IL + WWRD+IREA FEGHHT +VQ GLRLGMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP GL+VISPWGLPLLNT++LLSS A VTWAHHAIVGG
Sbjct: 1 MISQVKVSHRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLSLGVLTILYVMGIWWRDIIREASFEGHHTSSVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPSGLDVISPWGLPLLNTVLLLSSGATVTWAHHAIVGG 161
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX58_DICDH (Cytochrome c oxidase subunit 3 (Fragment) n=25 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX58_DICDH) HSP 1 Score: 255 bits (652), Expect = 7.020e-84 Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 1
Query: 10 YRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNA 498
Y + IHRHP+H+VDPSPWPLV +IG LS+T G VM M+N+SGG +L +G+ +L ++ WWRDVIREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAF AFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG A
Sbjct: 3 YTKVIHRHPYHLVDPSPWPLVASIGALSLTFGGVMFMHNYSGGSQLLLIGVFTVLYVMFTWWRDVIREASFEGQHTEAVQEGLRLGMILFIVSEVMFFFAFXXAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTILLLSSGATVTWAHHAIVGGLKNEA 165 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig82132.16410.1 >prot_S-dermatodea_contig82132.16410.1 ID=prot_S-dermatodea_contig82132.16410.1|Name=mRNA_S-dermatodea_contig82132.16410.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=169bp MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFback to top mRNA from alignment at S-dermatodea_contig82132:3..509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig82132.16410.1 ID=mRNA_S-dermatodea_contig82132.16410.1|Name=mRNA_S-dermatodea_contig82132.16410.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=507bp|location=Sequence derived from alignment at S-dermatodea_contig82132:3..509- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig82132:3..509- >mRNA_S-dermatodea_contig82132.16410.1 ID=mRNA_S-dermatodea_contig82132.16410.1|Name=mRNA_S-dermatodea_contig82132.16410.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at S-dermatodea_contig82132:3..509- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |