prot_S-dermatodea_contig82132.16410.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig82132.16410.1
Unique Name	prot_S-dermatodea_contig82132.16410.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	169

Homology

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A060IKX1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Bodanella lauterborni TaxID=246119 RepID=A0A060IKX1_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.310e-95
Identity = 134/154 (87.01%), Postives = 140/154 (90.91%), Query Frame = 0

Query:   16 VDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            VDPSPWPL  A+GVLSMTLGAVM MNNFSGGYRLFCVGI  +L  ++ WWRDVIREAVFEGHHTFAVQ GLRLGMILFIVSE+MFFFAFFWAFFASSLSPVFNIGGVWPP GLEVISPWGLP LNTL+LLSS A VTWAHHAIVGGY TNAIDG
Sbjct:    1 VDPSPWPLTAAMGVLSMTLGAVMFMNNFSGGYRLFCVGILTVLFVMFSWWRDVIREAVFEGHHTFAVQNGLRLGMILFIVSEIMFFFAFFWAFFASSLSPVFNIGGVWPPAGLEVISPWGLPFLNTLLLLSSGASVTWAHHAIVGGYKTNAIDG 154

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A7I6P3F8_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=10 Tax=Dictyotaceae TaxID=2874 RepID=A0A7I6P3F8_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 1.120e-85
Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 0

Query:    9 HRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            HRHPFH+VDPSPWP+V +IG LS+T G VM M+N+SGG +L C+G+  IL  +  WWRD+IREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG    A  G
Sbjct:    7 HRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLCLGVITILYVMITWWRDIIREASFEGQHTSAVQEGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTG 167

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A5K7TM11_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=15 Tax=Chorda TaxID=45033 RepID=A0A5K7TM11_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 9.950e-85
Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 0

Query:    8 IHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            + RHPFH+VDPSPWPLV ++G LS+T G V+ M+N+ GG  L C+G+  IL  ++ WWRDVIREA+FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SS+SPVFNIGGVWPP G+E ISPWGLP LNT++LLSS A VTWAHHAIVGG+   A+ G
Sbjct:    8 VQRHPFHLVDPSPWPLVASLGGLSLTFGGVLFMHNYKGGGELLCLGVITILYVMFTWWRDVIREALFEGQHTLAVQQGLRLGMILFIVSEVMFFFAFFWAFFTSSVSPVFNIGGVWPPTGIEAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEALQG 169

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A0U5B4J4_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U5B4J4_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.320e-84
Identity = 115/160 (71.88%), Postives = 136/160 (85.00%), Query Frame = 0

Query:   10 RHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            RHPFH+VDPSPWPLV A+G LS+T G V+ M+N+SGG +L  +G+ IIL  ++ WWRD+IREA+FEGHHT AVQ+GLR+GMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP GL+ ISPWGLP  NT++L+SS A VTWAHHAIVGG+   A+ G
Sbjct:   10 RHPFHLVDPSPWPLVAALGGLSLTFGGVLFMHNYSGGGKLLSLGVLIILYVMFTWWRDIIREALFEGHHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGLDAISPWGLPFFNTILLISSGASVTWAHHAIVGGFKKEALIG 169

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A499U4C2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Myriogloea sp. NZ TaxID=2185083 RepID=A0A499U4C2_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.260e-84
Identity = 113/164 (68.90%), Postives = 136/164 (82.93%), Query Frame = 0

Query:    6 RTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            + I RHPFH+VDPSPWPLV A+G LS+T G V+ M+N+ GG  L C+G+  +L  ++ WWRDVIREA+FEG HT AVQ+GLR+GMILFI+SEVMFFFAFFWAFFASS+SPVFNIGGVWPP G+  ISPWGLP LNT++LLSS A VTWAHHAIVGG+    ++G
Sbjct:    6 KMIQRHPFHLVDPSPWPLVAALGGLSLTFGGVLFMHNYEGGKELLCLGVLTVLYVMFTWWRDVIREALFEGQHTLAVQQGLRMGMILFIISEVMFFFAFFWAFFASSVSPVFNIGGVWPPTGITAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEGMEG 169

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A0U1V199_SARFS (Cytochrome c oxidase subunit 3 n=199 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V199_SARFS)

HSP 1 Score: 258 bits (658), Expect = 3.200e-84
Identity = 118/169 (69.82%), Postives = 138/169 (81.66%), Query Frame = 0

Query:    1 MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            M +  +T+ RHPFH+VDPSPWP V A+G LS T G V+ M+N+ GG +L C+G+  IL  ++ WWRDVIREA FEG HT AVQ+GLR+GMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP G+E ISPWGLPLLNT+ILLSS A VTW+HHAIVGG+   A+ G
Sbjct:    1 MREQAKTVQRHPFHLVDPSPWPFVAALGGLSSTFGGVLYMHNYDGGGQLLCLGLITILYVMFTWWRDVIREASFEGQHTAAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGIEAISPWGLPLLNTIILLSSGASVTWSHHAIVGGFKREALLG 169

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX76_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=5 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX76_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 3.200e-84
Identity = 117/158 (74.05%), Postives = 133/158 (84.18%), Query Frame = 0

Query:    9 HRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNA 166
            HRHPFH+VDPSPWPLV ++G LS+T G VM M+NFSGG +L  +G+  IL  ++ WWRD+IREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLE+ISPWGLPLLNT++LLSS A VTW HHAIVGG    A
Sbjct:    4 HRHPFHLVDPSPWPLVASLGALSLTFGGVMFMHNFSGGVQLLLLGVITILYVMFAWWRDIIREASFEGQHTGAVQEGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPSGLEIISPWGLPLLNTILLLSSGATVTWCHHAIVGGLKQEA 161

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX66_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=26 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX66_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 4.910e-84
Identity = 120/164 (73.17%), Postives = 133/164 (81.10%), Query Frame = 0

Query:    6 RTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNAIDG 169
            R  HRHPFH+VDPSPWPLV +IG LS+T G VM M+N+ GG +L  +G+  IL  +  WWRD+IREA FEG HT AVQ GLRLGMILFIVSEVMFFFAFFWAFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG    A  G
Sbjct:   11 RVSHRHPFHLVDPSPWPLVASIGALSLTFGGVMFMHNYLGGGQLLLIGVITILYVMITWWRDIIREAAFEGQHTSAVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTG 174

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 5.650e-84
Identity = 119/161 (73.91%), Postives = 135/161 (83.85%), Query Frame = 0

Query:    1 MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGG 161
            MI   +  HRHPFH+VDPSPWP+V +IG LS+T G VM M+N+SGG +L  +G+  IL  +  WWRD+IREA FEGHHT +VQ GLRLGMILFIVSEVMFFFAFFWAFF SSLSPVFNIGGVWPP GL+VISPWGLPLLNT++LLSS A VTWAHHAIVGG
Sbjct:    1 MISQVKVSHRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLSLGVLTILYVMGIWWRDIIREASFEGHHTSSVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPSGLDVISPWGLPLLNTVLLLSSGATVTWAHHAIVGG 161

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BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Match: B2ZX58_DICDH (Cytochrome c oxidase subunit 3 (Fragment) n=25 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX58_DICDH)

HSP 1 Score: 255 bits (652), Expect = 7.020e-84
Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 0

Query:    4 YRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLFCVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCACVTWAHHAIVGGYSTNA 166
            Y + IHRHP+H+VDPSPWPLV +IG LS+T G VM M+N+SGG +L  +G+  +L  ++ WWRDVIREA FEG HT AVQ+GLRLGMILFIVSEVMFFFAF  AFF SSL+PVFNIGGVWPP GLEVISPWGLPLLNT++LLSS A VTWAHHAIVGG    A
Sbjct:    3 YTKVIHRHPYHLVDPSPWPLVASIGALSLTFGGVMFMHNYSGGSQLLLIGVFTVLYVMFTWWRDVIREASFEGQHTEAVQEGLRLGMILFIVSEVMFFFAFXXAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTILLLSSGATVTWAHHAIVGGLKNEA 165

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig82132.16410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A060IKX1_9PHAE	1.310e-95	87.01	Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=...	[more]
A0A7I6P3F8_9PHAE	1.120e-85	74.53	Cytochrome c oxidase subunit 3 (Fragment) n=10 Tax...	[more]
A0A5K7TM11_9PHAE	9.950e-85	70.99	Cytochrome c oxidase subunit 3 (Fragment) n=15 Tax...	[more]
A0A0U5B4J4_9PHAE	1.320e-84	71.88	Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=...	[more]
A0A499U4C2_9PHAE	2.260e-84	68.90	Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=...	[more]
A0A0U1V199_SARFS	3.200e-84	69.82	Cytochrome c oxidase subunit 3 n=199 Tax=Sargassac...	[more]
B2ZX76_9PHAE	3.200e-84	74.05	Cytochrome c oxidase subunit 3 (Fragment) n=5 Tax=...	[more]
B2ZX66_9PHAE	4.910e-84	73.17	Cytochrome c oxidase subunit 3 (Fragment) n=26 Tax...	[more]
A0A4Y5T8S8_9PHAE	5.650e-84	73.91	Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotace...	[more]
B2ZX58_DICDH	7.020e-84	72.39	Cytochrome c oxidase subunit 3 (Fragment) n=25 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013833	Cytochrome c oxidase, subunit III, 4-helical bundle	GENE3D	1.20.120.80		coord: 78..169 e-value: 2.7E-27 score: 97.6
IPR000298	Cytochrome c oxidase subunit III-like	PFAM	PF00510	COX3	coord: 11..168 e-value: 7.6E-63 score: 212.8
IPR000298	Cytochrome c oxidase subunit III-like	PROSITE	PS50253	COX3	coord: 9..169 score: 31.738
None	No IPR available	GENE3D	1.10.287.70		coord: 7..77 e-value: 1.5E-25 score: 91.0
None	No IPR available	PANTHER	PTHR11403:SF7	CYTOCHROME C OXIDASE SUBUNIT 3	coord: 9..167
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 66..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 110..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 134..154
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..109
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 155..169
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..65
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..45
None	No IPR available	TMHMM	TMhelix		coord: 21..40
None	No IPR available	TMHMM	TMhelix		coord: 45..64
None	No IPR available	TMHMM	TMhelix		coord: 130..152
None	No IPR available	TMHMM	TMhelix		coord: 88..110
IPR024791	Cytochrome c oxidase subunit III	PANTHER	PTHR11403	CYTOCHROME C OXIDASE SUBUNIT III	coord: 9..167
IPR035973	Cytochrome c oxidase subunit III-like superfamily	SUPERFAMILY	81452	Cytochrome c oxidase subunit III-like	coord: 8..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig82132	contig	S-dermatodea_contig82132:3..509 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig82132.16410.1	mRNA_S-dermatodea_contig82132.16410.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig82132 3..509 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig82132.16410.1 ID=prot_S-dermatodea_contig82132.16410.1|Name=mRNA_S-dermatodea_contig82132.16410.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=169bp
MIKYRRTIHRHPFHMVDPSPWPLVVAIGVLSMTLGAVMLMNNFSGGYRLF
CVGISIILCAIYCWWRDVIREAVFEGHHTFAVQKGLRLGMILFIVSEVMF
FFAFFWAFFASSLSPVFNIGGVWPPVGLEVISPWGLPLLNTLILLSSCAC
VTWAHHAIVGGYSTNAIDG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013833	Cyt_c_oxidase_su3_a-hlx
IPR000298	Cyt_c_oxidase-like_su3
IPR024791	Cyt_c/ubiquinol_Oxase_su3
IPR035973	Cyt_c_oxidase_su3-like_sf