prot_S-dermatodea_contig8211.16408.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI) HSP 1 Score: 348 bits (893), Expect = 1.480e-113 Identity = 211/363 (58.13%), Postives = 236/363 (65.01%), Query Frame = 0
Query: 2 PVEELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGRIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGN----NNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLANGVTVEKALAKLKTAATKKARQEQRSRDTRSPVLGDSASPHPDGQRKRGGAGPNSRSPTAAGARNVRDGQIRSRSLTELELXXXXXXGAGVSPKAPRRMREDGGSSGDG---------------SDVTPSARKPRSASNVDSL-------SYGGGEGGSPPRHHM 337
PVEEL E+TKAALVK V+FY SDENLPTDAFMKKKVKAGG QGWV LKVI +FPK+KK+SKD+RAIA ALE S+ LVV K R+RRKTPF FPDK+G +DV SRTV+AVNIP +STVESL FFS+CGVAE IRVI S +N+ IQ P G +RDLYATCQ+STLEEAIRAVNELTDR SWRGG RV LANGVTVEKALAKLK A+ KKA+QEQ+ R NSRSP G RNVRDGQ+RSRSLTELEL G S + + P+ RKPRS SNVD+L S GG E GSPPRH M
Sbjct: 83 PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRV-------------------------NSRSPVDRGQRNVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTM 420
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO) HSP 1 Score: 129 bits (325), Expect = 3.900e-31 Identity = 76/205 (37.07%), Postives = 117/205 (57.07%), Query Frame = 0
Query: 12 AALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVKDGRIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKPKDIQPP-----MGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLANGVTVEKALAKLKTAAT 211
A +VK V+FY SD NLPTD F+ K+V+ +GWV +++IA+F ++K LSKD++ IA+ALE S LVV R+RRK P D+ ++V RT + N+P +T++SL FSA G + +R+ + N+ P+ I + R L+A ++ E+ AV +LTD N+WR G R + ++ A L+T T
Sbjct: 50 AKIVKQVNFYFSDTNLPTDNFLLKEVRKTP-EGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVSGHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQP-----NSGPRSIAQSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAIEASGESQRPDADLQTDQT 245
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE) HSP 1 Score: 127 bits (320), Expect = 8.150e-29 Identity = 68/87 (78.16%), Postives = 75/87 (86.21%), Query Frame = 0
Query: 2 PVEELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGRIRRK 87
PVEEL E+TKAALVK V+FY SDENLPTDAFMKKKVKAGG QGWV LKVI +FPK+KKLSKD+RAIA ALE S+ LVV K R+RRK
Sbjct: 1164 PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML) HSP 1 Score: 119 bits (299), Expect = 4.360e-28 Identity = 72/193 (37.31%), Postives = 113/193 (58.55%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKP---KDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 193
LSE+T+ +V+ V+FY SD NLPTD ++ K +K +G+V + +I +F K+K+L+K+ A+A+AL +S LVV +DG+ +RR P D + ++ RTV+A N+P D +++SL F G + +RV + N K + L+A +Y TLE+A +AV ELTD+ +WR G V L
Sbjct: 76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADID---LDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO) HSP 1 Score: 122 bits (307), Expect = 1.520e-27 Identity = 74/191 (38.74%), Postives = 118/191 (61.78%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIR-SSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 193
++EE KA +VK V+FY SD+NLPTD ++ K VK +G+V + V+A+F K+K L K+ +A+AL S +LVV +DG+ +RR P PD + + +V SRTV+A N+P D ++ES+ F + G + +R+ + + G + + M L+A ++ T+E+A +AV+ LTD +WR G RV L
Sbjct: 195 VNEELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKDP-EGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQP--LPDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQTAAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA) HSP 1 Score: 122 bits (306), Expect = 2.890e-27 Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVI--RSSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 193
L+EETKA +VK V+FY SD NLPTD ++ K VK +G+V + V+A+F K+K L K+ +A+ L S LVV +DG+ +RR P D E ++ +RTV+A N+P D ++ESL F G + +R+ ++ N K + M L+A +Y T+E A +AV ELTD +WR G RV L
Sbjct: 241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKDS-EGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHPLPEVDLE---EIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRICSPEAANGANATGAKHPKTDMLVSNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: UPI000D1C965E (la-related protein 6C n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C965E) HSP 1 Score: 121 bits (303), Expect = 4.540e-27 Identity = 73/193 (37.82%), Postives = 114/193 (59.07%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKP---KDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 193
LSE+T+A +V+ V+FY SD NLPTD ++ K +K +G+V + +I +F K+K+L+K+ A+A+AL +S LVV +DG+ +RR P D + ++ RTV+A N+P D +++SL F G + +RV + N K + L+A +Y TLE+A +AV ELTD+ +WR G V L
Sbjct: 173 LSEDTRAQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADID---LDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 361
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A061SIH4_9CHLO (La-related protein 7 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SIH4_9CHLO) HSP 1 Score: 118 bits (295), Expect = 4.450e-26 Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDST-VESLMSFFSACGVAETIRVIR-----------SSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRV 191
+S E +A++K V+FY D NLPTD F+ + VK QGWV+L +IA F ++K L+ + IA AL+ SE LVV DG+ +RRK P D+ ++ +SRTV+A N+P ++ +++L FS CG +RV + +SG+G++ K + ++A ++S+ EEA A ELTD +SWR G +V
Sbjct: 53 VSTELASAILKQVEFYFGDTNLPTDEFLLQHVKKSP-QGWVNLNLIARFKRMKALTTSVPTIAEALQNSEFLVVSSDGKAVRRKNPLPKIDE---AEASSRTVVAENLPAEAHGIDALTELFSKCGTVRMVRVCQPGEVKSVLQREASGRGSHGGGKQS---LTVSNQVHALVEFSSAEEAAAACRELTDDSSWRSGLKV 245
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A1Y1HK12_KLENI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK12_KLENI) HSP 1 Score: 117 bits (294), Expect = 1.750e-25 Identity = 75/196 (38.27%), Postives = 110/196 (56.12%), Query Frame = 0
Query: 5 ELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGN-NNKPKDIQ------PPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRV 191
E+SEE + +VK V+FYLSD+NLPTD F+ K V+ +GWV +K I F K+K LSK+ IA A+ +S+ LVV DG+ +RR P PD + D+ RTV+A N+P + T++ + + FS G +R+ G + +D Q P + +A + + E A RA ELTDR +WR G +V
Sbjct: 346 EISEELREKIVKQVEFYLSDQNLPTDNFLMKLVRKDP-EGWVPIKTIGGFNKIKSLSKNHAVIAQAVRSSQQLVVSSDGKKVRRAQP--LPDVN-LFDIQMRTVVAENLPSNPTIQGMEALFSQVGKVNMVRICHPEGANSATQSARDAQAKFKDGPSLLVSTRQHALIEMESFELADRACAELTDRQNWRSGLQV 537
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: J3L476_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3L476_ORYBR) HSP 1 Score: 114 bits (285), Expect = 4.220e-25 Identity = 79/193 (40.93%), Postives = 107/193 (55.44%), Query Frame = 0
Query: 6 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DG-RIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACG--VAETIRVIRSSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLA 194
L++E +VK V++Y SDENLPTD F+ K VK QG+V L VIA+F ++KKLS+DL I +AL S LVV DG R+RR P + + DV RTV+ N+P D + ES+ + F G V TI S G+ K DI ++A +Y T E A +A L D ++WR G +V LA
Sbjct: 75 LTDELCGRIVKQVEYYFSDENLPTDEFLMKFVKKNK-QGFVPLGVIASFRRMKKLSQDLSLIEAALRTSSKLVVSTDGKRVRRMHPL---QQNELKDVKKRTVVVENLPSDFSEESIHATFETVGKIVKITIHDQHSVGESATIKNHDIM----LSNKVHALVEYETTEAAEKAATTLNDESNWRAGMKVRLA 259 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig8211.16408.1 ID=prot_S-dermatodea_contig8211.16408.1|Name=mRNA_S-dermatodea_contig8211.16408.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=338bpback to top |