mRNA_S-dermatodea_contig8211.16408.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig8211.16408.1
Unique Name	mRNA_S-dermatodea_contig8211.16408.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 1.480e-113
Identity = 211/363 (58.13%), Postives = 236/363 (65.01%), Query Frame = 1

Query:    4 PVEELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGRIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGN----NNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLANGVTVEKALAKLKTAATKKARQEQRSRDTRSPVLGDSASPHPDGQRKRGGAGPNSRSPTAAGARNVRDGQIRSRSLTELELXXXXXXGAGVSPKAPRRMREDGGSSGDG---------------SDVTPSARKPRSASNVDSL-------SYGGGEGGSPPRHHM 1011
            PVEEL E+TKAALVK V+FY SDENLPTDAFMKKKVKAGG QGWV LKVI +FPK+KK+SKD+RAIA ALE S+ LVV K  R+RRKTPF FPDK+G +DV SRTV+AVNIP +STVESL  FFS+CGVAE IRVI  S        +N+   IQ P G +RDLYATCQ+STLEEAIRAVNELTDR SWRGG RV LANGVTVEKALAKLK A+ KKA+QEQ+ R                          NSRSP   G RNVRDGQ+RSRSLTELEL        G S +                               +  P+ RKPRS SNVD+L       S GG E GSPPRH M
Sbjct:   83 PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRV-------------------------NSRSPVDRGQRNVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTM 420

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 3.900e-31
Identity = 76/205 (37.07%), Postives = 117/205 (57.07%), Query Frame = 1

Query:   34 AALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVKDGRIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKPKDIQPP-----MGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLANGVTVEKALAKLKTAAT 633
            A +VK V+FY SD NLPTD F+ K+V+    +GWV +++IA+F ++K LSKD++ IA+ALE S  LVV   R+RRK P    D+   ++V  RT +  N+P  +T++SL   FSA G  + +R+ +      N+ P+ I        +   R L+A  ++   E+   AV +LTD N+WR G R  +      ++  A L+T  T
Sbjct:   50 AKIVKQVNFYFSDTNLPTDNFLLKEVRKTP-EGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVSGHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQP-----NSGPRSIAQSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAIEASGESQRPDADLQTDQT 245

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 8.150e-29
Identity = 68/87 (78.16%), Postives = 75/87 (86.21%), Query Frame = 1

Query:    4 PVEELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGRIRRK 261
            PVEEL E+TKAALVK V+FY SDENLPTDAFMKKKVKAGG QGWV LKVI +FPK+KKLSKD+RAIA ALE S+ LVV K  R+RRK
Sbjct: 1164 PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML)

HSP 1 Score: 119 bits (299), Expect = 4.360e-28
Identity = 72/193 (37.31%), Postives = 113/193 (58.55%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKP---KDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 579
            LSE+T+  +V+ V+FY SD NLPTD ++ K +K    +G+V + +I +F K+K+L+K+  A+A+AL +S  LVV +DG+ +RR  P    D   + ++  RTV+A N+P D +++SL   F   G  + +RV       + N     K  +        L+A  +Y TLE+A +AV ELTD+ +WR G  V L
Sbjct:   76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADID---LDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO)

HSP 1 Score: 122 bits (307), Expect = 1.520e-27
Identity = 74/191 (38.74%), Postives = 118/191 (61.78%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIR-SSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 579
            ++EE KA +VK V+FY SD+NLPTD ++ K VK    +G+V + V+A+F K+K L K+   +A+AL  S +LVV +DG+ +RR  P   PD + + +V SRTV+A N+P D ++ES+   F + G  + +R+ +  +  G +      +  M     L+A  ++ T+E+A +AV+ LTD  +WR G RV L
Sbjct:  195 VNEELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKDP-EGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQP--LPDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQTAAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA)

HSP 1 Score: 122 bits (306), Expect = 2.890e-27
Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVI--RSSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 579
            L+EETKA +VK V+FY SD NLPTD ++ K VK    +G+V + V+A+F K+K L K+   +A+ L  S  LVV +DG+ +RR  P    D E   ++ +RTV+A N+P D ++ESL   F   G  + +R+    ++   N    K  +  M     L+A  +Y T+E A +AV ELTD  +WR G RV L
Sbjct:  241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKDS-EGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHPLPEVDLE---EIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRICSPEAANGANATGAKHPKTDMLVSNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: UPI000D1C965E (la-related protein 6C n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C965E)

HSP 1 Score: 121 bits (303), Expect = 4.540e-27
Identity = 73/193 (37.82%), Postives = 114/193 (59.07%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVV-KDGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKP---KDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVML 579
            LSE+T+A +V+ V+FY SD NLPTD ++ K +K    +G+V + +I +F K+K+L+K+  A+A+AL +S  LVV +DG+ +RR  P    D   + ++  RTV+A N+P D +++SL   F   G  + +RV       + N     K  +        L+A  +Y TLE+A +AV ELTD+ +WR G  V L
Sbjct:  173 LSEDTRAQVVQQVEFYFSDANLPTDNYLMKFIKKDP-EGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADID---LDEIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNNAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 361

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A061SIH4_9CHLO (La-related protein 7 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SIH4_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 4.450e-26
Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDST-VESLMSFFSACGVAETIRVIR-----------SSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRV 573
            +S E  +A++K V+FY  D NLPTD F+ + VK    QGWV+L +IA F ++K L+  +  IA AL+ SE LVV  DG+ +RRK P    D+   ++ +SRTV+A N+P ++  +++L   FS CG    +RV +           +SG+G++   K     +     ++A  ++S+ EEA  A  ELTD +SWR G +V
Sbjct:   53 VSTELASAILKQVEFYFGDTNLPTDEFLLQHVKKSP-QGWVNLNLIARFKRMKALTTSVPTIAEALQNSEFLVVSSDGKAVRRKNPLPKIDE---AEASSRTVVAENLPAEAHGIDALTELFSKCGTVRMVRVCQPGEVKSVLQREASGRGSHGGGKQS---LTVSNQVHALVEFSSAEEAAAACRELTDDSSWRSGLKV 245

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: A0A1Y1HK12_KLENI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK12_KLENI)

HSP 1 Score: 117 bits (294), Expect = 1.750e-25
Identity = 75/196 (38.27%), Postives = 110/196 (56.12%), Query Frame = 1

Query:   13 ELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DGR-IRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGN-NNKPKDIQ------PPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRV 573
            E+SEE +  +VK V+FYLSD+NLPTD F+ K V+    +GWV +K I  F K+K LSK+   IA A+ +S+ LVV  DG+ +RR  P   PD   + D+  RTV+A N+P + T++ + + FS  G    +R+    G  +     +D Q      P +      +A  +  + E A RA  ELTDR +WR G +V
Sbjct:  346 EISEELREKIVKQVEFYLSDQNLPTDNFLMKLVRKDP-EGWVPIKTIGGFNKIKSLSKNHAVIAQAVRSSQQLVVSSDGKKVRRAQP--LPDVN-LFDIQMRTVVAENLPSNPTIQGMEALFSQVGKVNMVRICHPEGANSATQSARDAQAKFKDGPSLLVSTRQHALIEMESFELADRACAELTDRQNWRSGLQV 537

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BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Match: J3L476_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3L476_ORYBR)

HSP 1 Score: 114 bits (285), Expect = 4.220e-25
Identity = 79/193 (40.93%), Postives = 107/193 (55.44%), Query Frame = 1

Query:   16 LSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKVIANFPKLKKLSKDLRAIASALEASEMLVVK-DG-RIRRKTPFTFPDKEGMSDVASRTVLAVNIPPDSTVESLMSFFSACG--VAETIRVIRSSGKGNNNKPKDIQPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLA 582
            L++E    +VK V++Y SDENLPTD F+ K VK    QG+V L VIA+F ++KKLS+DL  I +AL  S  LVV  DG R+RR  P     +  + DV  RTV+  N+P D + ES+ + F   G  V  TI    S G+    K  DI         ++A  +Y T E A +A   L D ++WR G +V LA
Sbjct:   75 LTDELCGRIVKQVEYYFSDENLPTDEFLMKFVKKNK-QGFVPLGVIASFRRMKKLSQDLSLIEAALRTSSKLVVSTDGKRVRRMHPL---QQNELKDVKKRTVVVENLPSDFSEESIHATFETVGKIVKITIHDQHSVGESATIKNHDIM----LSNKVHALVEYETTEAAEKAATTLNDESNWRAGMKVRLA 259

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8211.16408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTW6_ECTSI	1.480e-113	58.13	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A5J4Y4J7_9CHLO	3.900e-31	37.07	La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608...	[more]
A0A6H5JW40_9PHAE	8.150e-29	78.16	HTH La-type RNA-binding domain-containing protein ...	[more]
D8QWC1_SELML	4.360e-28	37.31	Uncharacterized protein (Fragment) n=2 Tax=Selagin...	[more]
A0A2R6XE71_MARPO	1.520e-27	38.74	Uncharacterized protein n=3 Tax=Marchantia polymor...	[more]
A0A2K1LA96_PHYPA	2.890e-27	40.10	Uncharacterized protein n=1 Tax=Physcomitrium pate...	[more]
UPI000D1C965E	4.540e-27	37.82	la-related protein 6C n=2 Tax=Selaginella moellend...	[more]
A0A061SIH4_9CHLO	4.450e-26	37.50	La-related protein 7 n=2 Tax=Tetraselmis sp. GSL01...	[more]
A0A1Y1HK12_KLENI	1.750e-25	38.27	HTH La-type RNA-binding domain-containing protein ...	[more]
J3L476_ORYBR	4.220e-25	40.93	Uncharacterized protein n=1 Tax=Oryza brachyantha ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8211	contig	S-dermatodea_contig8211:64..8508 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	353.2
Seed ortholog evalue	1.3e-94
Seed eggNOG ortholog	2880.D7FTW6
Preferred name	LARP6
KEGG ko	ko:K15191,ko:K18733
GOs	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005844,GO:0006417,GO:0008092,GO:0008150,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010712,GO:0010714,GO:0017022,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032965,GO:0032967,GO:0032991,GO:0034248,GO:0034250,GO:0035613,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0097159,GO:1901363,GO:1902415,GO:1902416,GO:1905214,GO:1905216,GO:1990825,GO:1990904,GO:2000112
EggNOG free text desc.	RNA processing
EggNOG OGs	COG5193@1,KOG1855@2759
COG Functional cat.	JO
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03019,ko03021
Hectar predicted targeting category	other localisation
Ec32 ortholog description	RNA-binding protein Lupus La
Ec32 ortholog	Ec-12_002800.1
Exons	8
Model size	1015
Cds size	1014
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8211.16408.1	prot_S-dermatodea_contig8211.16408.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig8211 64..8508 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig8211:64..8508-
coding sequence from alignment at S-dermatodea_contig8211:64..8508-

protein sequence of mRNA_S-dermatodea_contig8211.16408.1

>prot_S-dermatodea_contig8211.16408.1 ID=prot_S-dermatodea_contig8211.16408.1|Name=mRNA_S-dermatodea_contig8211.16408.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=338bp
APVEELSEETKAALVKLVDFYLSDENLPTDAFMKKKVKAGGVQGWVSLKV
IANFPKLKKLSKDLRAIASALEASEMLVVKDGRIRRKTPFTFPDKEGMSD
VASRTVLAVNIPPDSTVESLMSFFSACGVAETIRVIRSSGKGNNNKPKDI
QPPMGAHRDLYATCQYSTLEEAIRAVNELTDRNSWRGGRRVMLANGVTVE
KALAKLKTAATKKARQEQRSRDTRSPVLGDSASPHPDGQRKRGGAGPNSR
SPTAAGARNVRDGQIRSRSLTELELEANAGGGAGVSPKAPRRMREDGGSS
GDGSDVTPSARKPRSASNVDSLSYGGGEGGSPPRHHM*

mRNA from alignment at S-dermatodea_contig8211:64..8508-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig8211.16408.1 ID=mRNA_S-dermatodea_contig8211.16408.1|Name=mRNA_S-dermatodea_contig8211.16408.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8445bp|location=Sequence derived from alignment at S-dermatodea_contig8211:64..8508- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGCCCGTGGAGGAACTATCGGAAGAGACCAAAGCAGCCCTCGTGAAGCT
GGTGGACTTTTACCTGAGCGACGAGAACCTGCCCACGGACGCTTTCATGA
AGAAGAAGGTCAAGGCCGGCGGAGTGCAAGGTGTGTGTGTGTTCTTTTTT
GTGAGAGCGCGCGCGCGTGTTGTCATCGTGCTGGGATCATGGCGTCGCGA
TGCGCACCGCCGCTTGTACAATCGCGGACATGGATGTTAGTGCTTGTAGC
TCGTTGCCTTGGTGGGTGGGTGGGTCATTGTGGTTGTCCCGAGGTTTTTG
TATCCCGGGCCTTTTCGTCGTGTGAAGGTGTCAAGGAGTGTCGCGCGCTT
CTTTTTTTTCGTTTCTCGAGTGTCGCTATTCATGCAATACATCGGTCAGG
CTCGATTCGCGTTCGCGTCTTATTTTTTTTCCTTCTTCCAGCAATCACCT
GTTTTCCCTTTTCCAAACAGGCCGTTCGTGTGTTAGTTGTACCGCAGGTC
GGGCACCCGTCCATATTCGCGATCGTCGCGCTACGTAAGCGAAATGCTCT
CGAGATGCATGAGAGCTGAGAGCCCGGAGCCTGGCGATGAAGAAATTTTT
AACCTTGTTTATCTTTTAGTATAAATTCTTCCTTGTCCCCAATCTCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCGCGCCCGGG
GCGTCCCTTGCCGATTGAGAGAACAGGCTGGGTGTCGCTCAAGGTTATCG
CCAACTTTCCGAAGCTGAAGAAGCTGTCGAAGGACCTCCGAGCGATCGCG
TCGGCCCTCGAGGCTTCGGAGATGCTGGTGGTGAAAGACGGCCGCATCCG
GCGAAAGGTGTGCCGTGGGTATGGTGTGACCAGTCGATGGATTGTTCCGG
GCGCCCCCTTTATTGCCAGAGCCTGGCAACGCGCGGCTATAGTGCATACC
GTTGCGGAGACTTTTCTACCCATTACTACTATAATAGGGTAGCTACCCTT
CTTGAGGACAGAGTTTCGTATTTTCGGGATTCGTGCTGCCCGCGCCGTTT
TTTTCTCATCGAAACAGCGGCGAACGCACGCGCGCGAGCATCGCATCGAA
CAGCGTGACGTTTGGTGTTGTATGTGTATGATAGCTACAGTATTCACGGG
CAGGAGTTTCTCGAGTGTTGCCGACGATCGAAAACAAGGGTTGGGTTGCG
ATGCTGCTATATGATTTGATGTGATATATTGTATGCATGCGCATGCGTGT
GTCATACCATCCGCGGGGTTAGCGGTGGTGTGTCTTGGGTTTTTGTTTTT
GTCCTTCCACGCCTCGCTGATCTAGCAAACCCCTCGCTTGTTTTTTCGTT
CGTTCGTACACATGGTTGTTTTTGTTGTGTTTCCATGTCGTTCACGCCTC
GCTGATTCCTCGAAACGGGGCGCTCGGGGTTTTTTCTTTTCGTTCGTACG
CATGGTTGTTTTCACTACTGTGTTTTCGTGTCGTCCACGCCTCGCTGATT
CCTCGAAACCCCTCTGGTGTTTTTTTCGTTCGTACACGTGGTTGTTTTCG
TCTTGTCCACGCCTTGCTGATTCCTAGAAGTCCGGTGTTTTTATGTTTTC
TTCTATCGTACACGTGGCTGTTCTCGCCGCAGACGCCGTTCACGTTCCCG
GACAAGGAGGGAATGTCCGACGTGGCCTCCAGGACGGTACTGGTGAGAAA
ATGAAGGGGGAGCATTGGGATACGTATATAGCAGCAAGTAGATTTATGTA
TAAAGCAAAACGTAGTTCACGTGTACACCCCTAACTAAACTCACAGGCAC
ACTTAGTCTATTAGTAGTAAAGTTCCAGGGGAAACCGAAAGTAGGTACGT
CCTATACTCTGCCTGTCGGCAAGGTATAGGTGAAAGGGGGGATGGAAAAG
GTACAGAGAAGTCACTATTAATATTAGTATTAGTGTTTCTTCACCGCGCG
ACAAGAAAAGCACTGTCCCCATATCGTGAGCCATCGTGAATCCCCGCGTA
TGTGTACCGCCGATCAACCAAATTTCTCGCGGGTATATGATATTCACCAG
CGGTTCTGTACGTTTGCTACAGTACATATAGATACAATTTGAAAGTGTGT
ACAGAGTATGTGATTGTTTTCATGCAACAAATTCCCAGCTCCATCCTCGT
GATAATGCCTTCAATTTTTTGTTTCTTTCTCGCGTGTGAAAAGCACCTGC
GACGGTGCAAGACGGTCGGTATCGCGGCGGCTGTCCGGGCAGAGACAAAA
AAGCAGCAAGTAGTGGAGGCCACCGCGTCCGATTAGCCCCGCCCGCGATA
CGAACCCATCATGGCGGTGCCTTGTTTTTTCGATGGTCTGTTTGCCTCGC
ATTACAGTATGATACATGTAAACACCGGTAATTTCCCTCTTTCACATATT
TTTTTAACCTGACGAATGTGTCTCTGCCTCTCTTCCCTTATTTTTTGTCT
TATTCCCTGCGCGTTTTTTTTCTCTTCTTCTTTGATTTTTCCCCCATCTT
GCTCGATGGCCTCGAAACAAAACGCCGTGTAAAATCACCGGTCCGTTCGT
GTGCCGCATCCCGGAAGGCTGTAAACATCCCTCCCGACTCCACGGTGGAG
TCGCTCATGAGTTTTTTTTCGGCCTGCGGCGTGGCGGAGACCATCCGCGT
CATCCGCAGTTCGGGGAAGGGCAACAACAACAAGTGAGTTGTCGTTGCTG
CTGTTGTTCTTGGCTCTTCTTTTCTGTCACACTACTTATACAAAGTGAGC
TGAATTATCTAAAAAATATCCTAAGCCGTGAATCCCGGAGATTGTGGGTG
GTTTATCATGTGATTCAATCCAAGGCAAAACTAACTCCCTGTTGTTGGTG
TTGTTGTGGTATGGTAGTGGTGTGATTGCCTGTTGTTCTCGTATCTCGCT
TTAATTAACGCTAAATTAACTCAAAAGTAATTCCACGGCCCCGACGGTCA
CGAGATCAAACAACCATTGTGATTCATTTCAGCGAGATAAATAAACCGAA
CGGAACATCCTCTACATTCGTTTTTTTGCACGTGCAGCATGATTAGTACT
ATTAATAGCAACACTGGTACAGTACAGGTTGCAGTTTGTAGCAGGTCGAT
TTCCTTCTCGAGGCCATGTGCCTTGTCCCTGTGCGTGCTAAGGCGGGAGG
GAGCCACGATTCACCACCGTCATGTGTCGACTCGGAATCACGTAGGCGGG
CGCAAACGAGAACAGCTACGGTATCTACCTTGAACTGCTGTATGAACACA
TACGGTGTACGCGAGGGAGAGCCTTTTGTTTTATTGTTGCTGCCGAGCGC
GCTGTCCTGGTAGTTCCAGTTCCTGGCAGCTTTGCCGGGGGAGATAACGC
AATAACCTAAAACCGCTCTCGCGTCTTTATAAACCGACCCTGCACGAAAA
ATCTATATCGTCACGCTCAACAATGATACTAGTAAGAGTATAGTCATGGA
ATTTGGAGGCACTCAAAGCTGTTGTTCGTCTTCTTTCTCAGCTACCTATG
CGTATATATCTACATGTATGTACCTGTGTGCCCACGCCAAGCGATTGCTT
TCCAAGGAGTTCGTCAAAAGATTATCGCGCTTGCCCGCTACGACTTATCG
GGGCGTCCGCAACAGCCGTGAGAAGCAAGCCCCGTGTCCGGGTTGAGGGG
CTGCTTTGCCTTTTCTTTTCTTTTTTTGCCAACGGGAGCGACTTGTCCCC
ATCGTTCGTCCGGCACACTTGGCTGCGCTAGCATACTGTATTACCGGCGT
CACTCCCTTCCTAACCTGAGTGTTTCACACGTAACGCCGTTGGCTGCGCT
GCTTGTGTGCGGCGCTTAGGCGTTCGCACGGAGACCAATGAGTCTCTGGT
GCGGGTACGTGGAGCATCGGGACGCCTGCTGAATGTGCGATGTGTATTTT
GTCACCCGGTCTATTGTCCGATCAACCCATGGGTTGTCTTGGTTTGGCGT
CGCACACGCGAAGGTGGCGACTGTCACCAGCAGCTGGTATGGTATTTGTG
AAACGCAGCCTGGTCGGCGAATTCCTGGCATACCGCTCCGTCCTCGCATT
TGTTGGGGGGGCGTGGTCTGTGTCCGTTTGGAGACGACATGCGTTGAACA
CGAGCACTTAAGTACACCCGTTGCCTGAGATGGCGAGAGGTGATGTAGAC
AGAATAGGAAGAACAATAATTGCGCCACCTTTGGCAGAGTAGGAAGGAAC
GATTGGCCATCGGCGGTCAATGGATCCTGCGAGAGCAATGCTCCGTCCGT
GCTCCCTCCCGAGGACGCGCGGCCAATATGACCTGACAGCTAAGGCATGC
GAAACCTGTGTACCCCCCAACCATTCAAAATTGTAATGCTTTCAAAGACA
TGAAGCGAGGGAACATGGTCCCAAGCCACACCCATTGCATGGAGGAGGCT
CACTTGTTGCGCATAAGGCTATTACGGAGGTACATAGTAATAGTAGTATA
ATAGTAATCAGGACCAAATGTCGCGGCCATAAATACGCAACTGTTCCGAC
CAAGAACACCCAGACAAGACCAAAAACTCGTGAAAAAAATATCCAACACG
AGGTCTGGTCTAGCCGACAAGCACCGATCGTGATCGTGAAAACCCAATTG
TGCTCCCGGCCTATTTTGTTTTGCTAAACAAATCTTTGTGACGAATTTGG
AACCTGTTAACTATGGTGTGTTGTATGGTTTATGGTACAAGTGTGTTTGT
CCTCAGCGATCACCCCTTTTTCCCGGACGTTTTGGATGTTCTTATCGCCC
GTGCCACCCGTACCGTCGCGACTATAAGGCCGAAGGACATTCAGCCGCCG
ATGGGAGCGCACCGCGACTTGTACGCGACCTGCCAGTACTCCACCCTCGA
GGAAGCAATCAGGGTAAGCATGGGTCGAAAAAGGAGTGTTATGGGCCGCG
CGGTGACCTCAGGTGTTGCTCGACGCCTAGTGTAACCAGCTCTCGCGGGG
GGCTTCGTATAGTAGTATTTATCTAAATGGTGGTTGTAACTTGGGCTTTT
ATGGAGAGACCCGAGGAGAGCTCGAGCGATTTTGTCCCTGTGCGCAATCG
AGCTAAATCCTTCGCGCTGTGCTTGCAAGTCCTGCGCAATCGTGTTCGCC
GTCGGCTGTGCCTTGTTTTTGAGGGCTCAGTGTTTCGCCGCGCGTGTATA
CAGCATCCTATTTTATTGCCGAGCGGCGCTGGCTGGCGATATGTGATAAG
CCTCCCTGATCACGAGAGAAGCACGTGTACTTCGTATACATACAAGCGGG
TACAAGCGAGGCTCTGCGTGAACGAGGGCTGGCATGCCGCTGTCCCCGCA
CTCGTGGGTGTTGTCCCTTTTATCAGGGGGGTGTGATACTCTCCACTCTG
GCGGTATCCTTACATACTCTACGTATTTTTGCTAAAACTGGGCGCACCCT
TCCCGCCAGCGTGCGATTTAAAAAATATAAAATAAAAATCCCATACAAGT
ACACTCCCCGCATATTTATGGTGAGCAAGCGTTGATGGACTTGTTGTGAC
GGTCTTCGCAGATTCTCAAAAAAAGGTTTGGGTTTTTTTTTTACGGTGCA
GGAAAACCATATATAATTTGCTACCCCCTCCCCCATGTGGTGCGCCCCCG
ACCGCGAATATTTTTCCATAAATCTAGCGCCGCTTTTTTAAGGACCATAG
GTGCTTGCAGCAGTACGTGCGATTTTCAGGACCTTCACTAACATAGGGGT
CACGGCGGTGAATCTGTCCTTGGGTCTTTTACACATCGCCCGTCACACCA
TATGGGAGCTGGTTATACTCGGAAGTCATTTTTTCTAACCCTATGATCAA
CGCGCGATAAAAATCAAAGGTGTTAACCAGGGATAAGAGAGATGGGATGA
TCCCTTGTGGCCACAGATGGACCTCGGAAAAGCAAATCTATCGTATGTGT
GCGAAAAAATATATACGTATGCTTGGGACCCGTTCTCGTCAATCACCGCC
CCACCTTTGGCAATGTAGGAAGGAACGATTGGCCATCGGCGATCAATCGA
TCGATCGAACCTGTGGGAACATTAACAATGCTCCTCCGTTCTCCTCCCGA
GGACACCTGGTCAATGGCCCTAACACCTGCGGTATGCACAACTTGAGGAC
CCACCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCGTTTCATCTTGAC
CTATCCCGACTCAAGGCCGTGAACGAGCTTACCGACCGCAATAGCTGGCG
AGGGGGAAGGAGAGTGATGCTGGCCAATGGAGTCACCGTTGAGAAGGCCC
TGGCCAAGCTCAAGACCGCGGCGACTAAAAAGGCCAGACAGGAGCAGCGA
AGCAGGCGAGAGCGTGGGCGGGATCGAGCCGAGTCGGGTCGGGTCGGGTC
GATTCGCGTTGGGTCGGGTAGGGTAGGGGGGGCGTACTCATGTGTCGCAT
GCCTTAACTGTTAGATCATGATCACGCGTCCTCGAGAGGACAGAGCATTG
TTCCCACAGGATCGTATCGCCGATGGGCAATCGTTCCTTCCTACGCGCAG
CGTAGGAAGGGTAAATTGTAAAGTGTATAGTGCGAGACGTCCGATTATTT
TTTCGGTGACGTGTTTTTCTTGAGCCGGCGTGCAATCGATTTTTGATATG
TATAGCGCCGGCGGCGTTGGACGTAAGAGGCCTGGTCAGCAGTACATGTT
ATGTTCTGACAGCTCTCTACACGTACTGCTTTGCCACTTATGTATCATAT
CATAAATGTACTGTTGTTAAACGGGTATTGCCCAGGATGCCCTTAGATTT
TGCGAGCTACAACGCGCGCTGAATGGGCAAATGGAAGATGTGGCATGCAA
CGGCCCACTGGTCTGCTGTGACCTGACCCACGCCTGCAGCCTACTCGTTG
CCTTGGTCCTCTCACGTCATTACTTGACTTGACGCGTGTTGTACTTGTAT
CATCGCGGCCTCCCGACTTGTTGCAGGGACACCCGGTCGCCCGTCCTCGG
CGATTCAGCGTCTCCGCACCCCGATGGCCAGCGCAAACGGGGTGGTGCAG
GGTGAGAGCCGCGCGTTTGTCGCTAAGCTTGCCACACACGCACTGCGCCT
GCCACACACATGGACTGCTGACGAGCTCTAATCTCGTTGAATCTACACAC
TTTGACAGAATGCTGCCGTTGATTGTAGCGTTGATTGCTTCAACTTGAAC
AGTAATGTCATGGGGCTAAGCGATTCCCAGGCTGCCACTGATAGAAATGT
TGACTGGTATTGAATGCCATGAGGGAAAACGATTTTCCCAGGCTGCCGTT
GATTCCCCCTTAAAGACGCCAAAGGCGATATAGTTACGAACAAGTAACGT
AACGTGCTGTGGGGTTCGTTTTTTTACTGGAGCAATGGGGCTATTTTAGC
CCAGGTCAATCTCCCTAAGAAAAGTCGAGTTATGTATTGAGGCATGTACA
CTATTAATGGTACCATTGTAAGGACCTACGGGTGGTTGTGTTGGCCATGA
AGCGGTAGAAAACTAGAAACAGAACAAGGCAAAAATACCCCGGTTTGTTA
ATCGTTCTCGCAACCCGAGAGAAAACAGTGGCGTTCGAAACCTCCTTACA
TGATGAAGGGATCCCAGCATGTACGCAGTACCGTAGCGAGGGATATATCG
ATTCTACCTGGAGCCACTCTGTCTAAAGGTTATTTCAATGGTGCTATTGC
TTGACGGCTAAACCCAGCATAATACCCTGCGGCACTGCTGTCCACATGTT
TGACTTCATTGTTCAAGCTTAGACCTTACCCCCCCCCTGCCCCTTTCAAA
TGATGATTGCGGCTCGGAGGAGTGTGAAGACCGTGTCAATGTAGTGGTGG
AATGCCCATTGTATGAAAAGGGGAGGGAAGTGTTCATGACTGAGCTGGGG
AATTTGAAGGCTGTGACAGAGAGACTTTTGAAGCATGGGACAGCCAGACG
AAGGCGGTACAAGTAGCAGCTATACGGGGGATAAGAAGTGACCTGAGAAG
GCGAGAAGTGATGTAGACACGATAGGAAAAAATATTTTGCGCCACCTTTG
GCAAAAGTAGGAAGGAACGATTGGCCATCGACGATAGATCGATCGATCCT
GTGGGAACAGTGCTCCGTCCTCTCGAGGACACGTGGTCAATGGTCTAACA
GCTAAGGCATGGAAAACATGAGCCCCCCCCCCCCCCCTCGCGCGCACGTC
CTACTCTTGATCCCACAGGCCAAACTCACGCTCCCCTACCGCAGCAGGAG
CTCGCAACGTCCGCGACGGGCAGATACGCTCACGCTCCCTGACGGAACTA
GAACTAGAGGCCAACGCTGGAGGCGGGGCAGGAGTAAGCCCAAAAGCTCC
CCGCCGAATGCGTGAGGACGGAGGCAGCAGCGGGGATGGCTCGGATGTGA
CCCCGTCAGCGCGCAAGCCGCGCTCCGCGTCCAACGTGGACTCGTTATCT
TACGGGGGCGGGGAGGGCGGGTCCCCCCCTCGGCATCACATGTAA

Coding sequence (CDS) from alignment at S-dermatodea_contig8211:64..8508-

>mRNA_S-dermatodea_contig8211.16408.1 ID=mRNA_S-dermatodea_contig8211.16408.1|Name=mRNA_S-dermatodea_contig8211.16408.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2028bp|location=Sequence derived from alignment at S-dermatodea_contig8211:64..8508- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGCCCGTGGAGGAACTATCGGAAGAGACCAAAGCAGCCCTCGTGAAGCT
GGTGGACTTTTACCTGAGCGACGAGAACCTGCCCACGGACGCTTTCATGA
AGAAGAAGGTCAAGGCCGGCGGAGTGCAAGGCGCCCGTGGAGGAACTATC
GGAAGAGACCAAAGCAGCCCTCGTGAAGCTGGTGGACTTTTACCTGAGCG
ACGAGAACCTGCCCACGGACGCTTTCATGAAGAAGAAGGTCAAGGCCGGC
GGAGTGCAAGGCTGGGTGTCGCTCAAGGTTATCGCCAACTTTCCGAAGCT
GAAGAAGCTGTCGAAGGACCTCCGAGCGATCGCGTCGGCCCTCGAGGCTT
CGGAGATGCTGGTGGTGAAAGACGGCCGCATCCGGCGAAAGGCTGGGTGT
CGCTCAAGGTTATCGCCAACTTTCCGAAGCTGAAGAAGCTGTCGAAGGAC
CTCCGAGCGATCGCGTCGGCCCTCGAGGCTTCGGAGATGCTGGTGGTGAA
AGACGGCCGCATCCGGCGAAAGACGCCGTTCACGTTCCCGGACAAGGAGG
GAATGTCCGACGTGGCCTCCAGGACGGTACTGACGCCGTTCACGTTCCCG
GACAAGGAGGGAATGTCCGACGTGGCCTCCAGGACGGTACTGGCTGTAAA
CATCCCTCCCGACTCCACGGTGGAGTCGCTCATGAGTTTTTTTTCGGCCT
GCGGCGTGGCGGAGACCATCCGCGTCATCCGCAGTTCGGGGAAGGGCAAC
AACAACAAGCTGTAAACATCCCTCCCGACTCCACGGTGGAGTCGCTCATG
AGTTTTTTTTCGGCCTGCGGCGTGGCGGAGACCATCCGCGTCATCCGCAG
TTCGGGGAAGGGCAACAACAACAAGCCGAAGGACATTCAGCCGCCGATGG
GAGCGCACCGCGACTTGTACGCGACCTGCCAGTACTCCACCCTCGAGGAA
GCAATCAGGGCCGAAGGACATTCAGCCGCCGATGGGAGCGCACCGCGACT
TGTACGCGACCTGCCAGTACTCCACCCTCGAGGAAGCAATCAGGGCCGTG
AACGAGCTTACCGACCGCAATAGCTGGCGAGGGGGAAGGAGAGTGATGCT
GGCCAATGGAGTCACCGTTGAGAAGGCCCTGGCCAAGCTCAAGACCGCGG
CGACTAAAAAGGCCAGACAGGAGCAGCGAAGCAGGCCGTGAACGAGCTTA
CCGACCGCAATAGCTGGCGAGGGGGAAGGAGAGTGATGCTGGCCAATGGA
GTCACCGTTGAGAAGGCCCTGGCCAAGCTCAAGACCGCGGCGACTAAAAA
GGCCAGACAGGAGCAGCGAAGCAGGGACACCCGGTCGCCCGTCCTCGGCG
ATTCAGCGTCTCCGCACCCCGATGGCCAGCGCAAACGGGGTGGTGCAGGG
GACACCCGGTCGCCCGTCCTCGGCGATTCAGCGTCTCCGCACCCCGATGG
CCAGCGCAAACGGGGTGGTGCAGGGCCAAACTCACGCTCCCCTACCGCAG
CAGGAGCTCGCAACGTCCGCGACGGGCAGATACGCTCACGCTCCCTGACG
GAACTAGAACTAGAGGCCAACGCTGGAGGCGGGGCAGGAGTAAGCCCAAA
AGCTCCCCGCCGAATGCGTGAGGACGGAGGCAGCAGCGGGGATGGCTCGG
ATGTGACCCCGTCAGCGCGCAAGCCGCGCTCCGCGTCCAACGTGGACTCG
TTATCTTACGGGGGCGGGGAGGGCGGGTCCCCCCCTCGGCATCACATGTA
AGCCAAACTCACGCTCCCCTACCGCAGCAGGAGCTCGCAACGTCCGCGAC
GGGCAGATACGCTCACGCTCCCTGACGGAACTAGAACTAGAGGCCAACGC
TGGAGGCGGGGCAGGAGTAAGCCCAAAAGCTCCCCGCCGAATGCGTGAGG
ACGGAGGCAGCAGCGGGGATGGCTCGGATGTGACCCCGTCAGCGCGCAAG
CCGCGCTCCGCGTCCAACGTGGACTCGTTATCTTACGGGGGCGGGGAGGG
CGGGTCCCCCCCTCGGCATCACATGTAA