prot_S-dermatodea_contig82057.16398.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82057.16398.1
Unique Nameprot_S-dermatodea_contig82057.16398.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length48
Homology
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.150e-23
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SGEDDLEEPIAVRPTSETIMYPAFS+WIRSHRDLPLKLNQWSNVVR
Sbjct:  500 TKSGEDDLEEPIAVRPTSETIMYPAFSRWIRSHRDLPLKLNQWSNVVR 547          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A3S5BM63_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5BM63_9PLAT)

HSP 1 Score: 88.2 bits (217), Expect = 6.900e-22
Identity = 37/48 (77.08%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG  +L EP+A+RPTSETIMYP+F+KWI+SHRDLPLKLNQWSNVVR
Sbjct:   10 TRSGSSELSEPVAIRPTSETIMYPSFAKWIQSHRDLPLKLNQWSNVVR 57          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A7S1WEE7_ALECA (Proline--tRNA ligase (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WEE7_ALECA)

HSP 1 Score: 89.7 bits (221), Expect = 7.000e-22
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG  DL +PIA+RPTSETIMYPAF+KWIRSHRDLPLKLNQW+NVVR
Sbjct:   18 TKSGNSDLAKPIAIRPTSETIMYPAFAKWIRSHRDLPLKLNQWANVVR 65          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A7S2U994_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U994_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.480e-21
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG+ +L +PIAVRPTSETIMYPAFS WI+SHRDLPLKLNQWSNVVR
Sbjct:   53 TRSGDGELAKPIAVRPTSETIMYPAFSDWIKSHRDLPLKLNQWSNVVR 100          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A067FKC4_CITSI (Proline--tRNA ligase (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FKC4_CITSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.370e-21
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SGE DLE PIA+RPTSET+MYP FSKWIR HRDLPLKLNQW NVVR
Sbjct:   69 TKSGESDLEVPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVR 116          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: K0SBF7_THAOC (Proline--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBF7_THAOC)

HSP 1 Score: 93.2 bits (230), Expect = 5.590e-21
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SGEDDL  PIA+RPTSETIMYPAFS WIRSHRDLPLKLNQWSNVVR
Sbjct:  114 TKSGEDDLAAPIAIRPTSETIMYPAFSDWIRSHRDLPLKLNQWSNVVR 161          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A1X6NK56_PORUM (Proline--tRNA ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK56_PORUM)

HSP 1 Score: 93.2 bits (230), Expect = 5.980e-21
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG+ D+E+PIAVRPTSETIMYPAF+KWIRSHRDLPLKLNQWSNVVR
Sbjct:  177 TRSGQTDMEKPIAVRPTSETIMYPAFAKWIRSHRDLPLKLNQWSNVVR 224          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A3P8BRJ7_9TREM (AA_TRNA_LIGASE_II domain-containing protein n=1 Tax=Schistosoma mattheei TaxID=31246 RepID=A0A3P8BRJ7_9TREM)

HSP 1 Score: 87.4 bits (215), Expect = 6.160e-21
Identity = 37/48 (77.08%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG+ DL EPIA+RPTSETIMYP F+KWI+SHRDLPL++NQWSNVVR
Sbjct:   75 TKSGDTDLTEPIAIRPTSETIMYPIFAKWIQSHRDLPLRINQWSNVVR 122          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: UPI00098E2C21 (proline--tRNA ligase, cytoplasmic-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E2C21)

HSP 1 Score: 86.3 bits (212), Expect = 7.270e-21
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            + SG+ +LE PIA+RPTSET+MYP +SKWIRSHRDLPLKLNQW NVVR
Sbjct:   42 TNSGQSELEIPIAIRPTSETVMYPYYSKWIRSHRDLPLKLNQWGNVVR 89          
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Match: A0A2V3IXL6_9FLOR (Proline--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL6_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 8.040e-21
Identity = 42/48 (87.50%), Postives = 47/48 (97.92%), Query Frame = 0
Query:    1 SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR 48
            ++SG+ DLEEPIAVRPTSETIMYPA+SKWIRS+RDLPLKLNQWSNVVR
Sbjct:  155 TKSGKKDLEEPIAVRPTSETIMYPAYSKWIRSYRDLPLKLNQWSNVVR 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82057.16398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI4.150e-2393.75Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A3S5BM63_9PLAT6.900e-2277.08Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
A0A7S1WEE7_ALECA7.000e-2281.25Proline--tRNA ligase (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S2U994_9STRA2.480e-2181.25Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A067FKC4_CITSI4.370e-2181.25Proline--tRNA ligase (Fragment) n=1 Tax=Citrus sin... [more]
K0SBF7_THAOC5.590e-2187.50Proline--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A1X6NK56_PORUM5.980e-2185.42Proline--tRNA ligase n=1 Tax=Porphyra umbilicalis ... [more]
A0A3P8BRJ7_9TREM6.160e-2177.08AA_TRNA_LIGASE_II domain-containing protein n=1 Ta... [more]
UPI00098E2C217.270e-2177.08proline--tRNA ligase, cytoplasmic-like n=1 Tax=Asp... [more]
A0A2V3IXL6_9FLOR8.040e-2187.50Proline--tRNA ligase n=1 Tax=Gracilariopsis chorda... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..48
NoneNo IPR availableGENE3D3.30.930.10coord: 1..48
e-value: 1.5E-15
score: 59.3
NoneNo IPR availablePANTHERPTHR43382:SF2BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASEcoord: 2..48
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 2..48
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 4..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82057contigS-dermatodea_contig82057:129..272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82057.16398.1mRNA_S-dermatodea_contig82057.16398.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82057 129..272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82057.16398.1 ID=prot_S-dermatodea_contig82057.16398.1|Name=mRNA_S-dermatodea_contig82057.16398.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=48bp
SQSGEDDLEEPIAVRPTSETIMYPAFSKWIRSHRDLPLKLNQWSNVVR
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