prot_S-dermatodea_contig82.16394.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82.16394.1
Unique Nameprot_S-dermatodea_contig82.16394.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length201
Homology
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 8.210e-104
Identity = 145/176 (82.39%), Postives = 158/176 (89.77%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEPSETST 199
            EYVKT+  D+V  KA VHG HNLFLMG+SIIMPG II GELQ IRIGRYCV+GE TVIRPAYR+E E S+LKCRFTPLSVG+HTYIGKSCV+ESAGIGCNVRI+DGCVLGRNSFVRDNCHLL GTVLPEGAVVPPFTVL GCPA++VSVLHEST S+WTEDA+NFYETFEPS   T
Sbjct:    8 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVT 183          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV)

HSP 1 Score: 156 bits (395), Expect = 7.520e-45
Identity = 73/169 (43.20%), Postives = 112/169 (66.27%), Query Frame = 0
Query:   25 YVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQA-IRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETF 192
            Y+KT A + VS  A +HGS ++ + GKS++ PGA++ G+L A +R+GRYC +G+ +V+RP     P+G+    R  P S+GNHT IG+ CV+E+A +G +V + DGCVLG+ S ++D C +  GTVL   AVVPPF+++ G P +VV  + ES A+   + ++  Y  F
Sbjct:   21 YIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPPSASLPDGTE---RRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEMPESAAAEIPDRSLGEYAAF 186          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB)

HSP 1 Score: 149 bits (376), Expect = 3.440e-42
Identity = 70/173 (40.46%), Postives = 115/173 (66.47%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEPSE 196
            E+++T + + VS  + + GS N+ L GKS+++PG+II G+L A+RIGRYCVI +  V+RPAY+  P+G +    +  LS+G+  Y+GK  V+E+A IG +V I +G ++ + + + D C +L G V+PE AV+PPF++ GG PA ++  L E+   +  E A   YE++ P++
Sbjct:   10 EWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKALPKGLN----YFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVPAK 178          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.960e-40
Identity = 70/170 (41.18%), Postives = 109/170 (64.12%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFE 193
            E+++T   +LVS K ++   + + + GK+I+M G II G+L  + +GRYC +G  T+IRPA ++  E +     F  + +G++T IG+ C+IE+A IG NV+     VLG+ S VRD C L +GTVL  GAVVPPF+V+ GCP +V S L E++   ++  A + Y+ F+
Sbjct:   11 EFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALKISEEPT-----FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFK 175          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.320e-38
Identity = 71/184 (38.59%), Postives = 109/184 (59.24%), Query Frame = 0
Query:   25 YVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRP-AYRVEPEGSHLKC-------------RFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVS--VLHESTASMWTEDAINFYETF 192
            YVKT A + VS KA +HG+ N+ + GKSI+ P   I G+ Q +RIGRYC IGE +++RP +Y+   + SH                +F PL VG+HT IGK CVIE+A +G +V I D CV+ +   ++D C++  GTV+ +  V+PPF+ + GCP  ++   ++ ES  +   +D +  +  F
Sbjct:   47 YVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEF 230          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH)

HSP 1 Score: 139 bits (350), Expect = 2.960e-38
Identity = 65/171 (38.01%), Postives = 106/171 (61.99%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEP 194
            +Y++T + + VS ++ + GS N+ + GK+I+M G +I G+L  +RIGR+C+I    VIRPA++   +G      F PL +G+H  I ++ V+ +A +G  V I   CV+GR + ++D C + + T+LP  AVVPPFT+  G P K+ S L + T  + T+  +N+Y  F P
Sbjct:   12 QYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFKRFSKG----VAFFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A0N4UAM7_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UAM7_DRAME)

HSP 1 Score: 139 bits (349), Expect = 4.700e-38
Identity = 64/170 (37.65%), Postives = 107/170 (62.94%), Query Frame = 0
Query:   23 REYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETF 192
            +E+V+T   + V+ K+++ GS N+ L GKSI+M   I+ G++ +IR G+YCV+GE TVIRP+Y+   +G      F P+ +G+H +I   C+I +A IG  V I  G ++GR+  ++D   +L    +P  AV+PPF+++ G P  ++  L EST ++ T+   +FY+ F
Sbjct:   11 QEFVETATGNKVNKKSRLFGSQNIVLNGKSILMKDCILRGDMNSIRAGKYCVVGERTVIRPSYKRFSKG----LTFFPVHIGDHVFIENDCIIMAAQIGAFVHIGSGAIVGRSVIIKDCVQVLPNAFVPHDAVIPPFSIVSGNPGTIIGELPESTQNLMTQATRSFYDNF 176          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A0K0JQM9_BRUMA (BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 RepID=A0A0K0JQM9_BRUMA)

HSP 1 Score: 135 bits (339), Expect = 1.340e-36
Identity = 65/171 (38.01%), Postives = 101/171 (59.06%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEP 194
            EYV+T   + V+ K+++ GS N+ L GKS +M   I+ G++  IR GRYCV+GE T+IRP+Y+   +G      F P+ +G+H +IG  C++ +A IG  V          +  ++    +L  TV+P  AV+PPF+++GG P  V+  L EST  + T+   NFY+ F P
Sbjct:    8 EYVETATGNKVNRKSRLFGSQNIVLNGKSTLMKDCILRGDMHNIRTGRYCVVGERTIIRPSYKRFSKG----LTFFPVHIGDHVFIGNDCIVMAAEIGAFVHXXXXXXXXXSVIIKSCVQVLPNTVVPHDAVIPPFSIVGGNPGTVIGHLPESTQELMTQATRNFYDNFVP 174          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE)

HSP 1 Score: 133 bits (334), Expect = 7.800e-36
Identity = 66/171 (38.60%), Postives = 107/171 (62.57%), Query Frame = 0
Query:   26 VKTKAKDLVSLKA-QVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEPS 195
            V+T   + VS +   + GS N+ L GKSIIM G I+ G+L ++RIG+YCVIGE ++IRP+++   +G      + P+ +G++ +I   CV+ +A IG  V I    ++GR++ ++D   +L   V+P+ AV+PPF+++GG PA +V  L  ST  +  +   +FYE F PS
Sbjct:   14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFKAFSKG----LTYFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVPS 180          
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Match: L8GIW5_ACACA (Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIW5_ACACA)

HSP 1 Score: 133 bits (334), Expect = 1.370e-35
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 0
Query:   24 EYVKTKAKDLVSLKAQVHGSHNLFLMGKSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTPLSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVLPEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEP 194
            E+++T   + V  K+ + GS N+ L GK+++MPGA+I G+L A+ +G+Y VIG   VIRPA++   +GS     F P+++G+  +I + C++ +  IG  V +  G VLGR+S ++D C + EG+VL  G VVPPFT+ GG PA     L E    M  E ++  Y TF P
Sbjct:   16 EFIETHTGNKVGRKSILCGSQNIRLHGKTVVMPGAMIRGDLGAVNVGKYSVIGRNVVIRPAHK-RYQGS---VAFFPVTIGDFVHIEEDCIVSATSIGSYVHVGRGAVLGRHSVLKDCCWVEEGSVLAPGTVVPPFTIFGGSPAVQKGQLPECFQEMQKEASLINYNTFLP 182          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82.16394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ0_ECTSI8.210e-10482.39Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S1ZJQ9_TRICV7.520e-4543.20Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0L0DIQ2_THETB3.440e-4240.46Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC... [more]
A0A7S2V2Q0_9STRA3.960e-4041.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3QBQ9_9STRA2.320e-3838.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A3S1H5M8_ELYCH2.960e-3838.01Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A0N4UAM7_DRAME4.700e-3837.65Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
A0A0K0JQM9_BRUMA1.340e-3638.01BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 Rep... [more]
A0A0N4UWP5_ENTVE7.800e-3638.60Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
L8GIW5_ACACA1.370e-3540.35Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 31..198
e-value: 1.6E-41
score: 143.4
NoneNo IPR availablePANTHERPTHR46126:SF1DYNACTIN SUBUNIT 5coord: 21..197
NoneNo IPR availablePANTHERPTHR46126FAMILY NOT NAMEDcoord: 21..197
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 106..139
e-value: 4.0E-5
score: 23.2
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 45..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82contigS-dermatodea_contig82:23192..26509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82.16394.1mRNA_S-dermatodea_contig82.16394.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82 23150..28062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82.16394.1 ID=prot_S-dermatodea_contig82.16394.1|Name=mRNA_S-dermatodea_contig82.16394.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=201bp
MSSPSSLVPAPASAALATKAVDREYVKTKAKDLVSLKAQVHGSHNLFLMG
KSIIMPGAIICGELQAIRIGRYCVIGEETVIRPAYRVEPEGSHLKCRFTP
LSVGNHTYIGKSCVIESAGIGCNVRIDDGCVLGRNSFVRDNCHLLEGTVL
PEGAVVPPFTVLGGCPAKVVSVLHESTASMWTEDAINFYETFEPSETSTA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf