prot_S-dermatodea_contig818.16379.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig818.16379.1
Unique Nameprot_S-dermatodea_contig818.16379.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length196
Homology
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BLAST of mRNA_S-dermatodea_contig818.16379.1 vs. uniprot
Match: A0A4S8KUB8_DENBC (Uncharacterized protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KUB8_DENBC)

HSP 1 Score: 53.5 bits (127), Expect = 6.070e-5
Identity = 41/141 (29.08%), Postives = 59/141 (41.84%), Query Frame = 0 
Query:   31 SCGVIVGRQVLWMSEGQEEFGRGLNRM---FPAERRRPGLVFWDKACERFRFVRVHPQ--PGWEGTTYMVDGWHFQGHK--QLFCRVHTNPNLTTNPLPW-------EAGPSGAMRFMWNTSIAESTKSWAHALGSFLSSM 157
            +CG  +G    + SE   +    LN++   FP  R  P  + +D AC+  R +       P    T ++VD WH+ GHK   + CR+  NP  T    P        + G +   R  +NT  AE   SW     S L  M
Sbjct:  524 ACGTPIGWGKCYNSESSPQVLAILNKIWSDFPTLR--PSFLAYDDACDLLRHIATQDSNSPWLRSTKFVVDAWHYIGHKATDVLCRIWCNPTPTNGSQPDLIRVVTDDNGHTHLTR-AFNTETAEQLNSWISPYESQLRQM 661
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig818.16379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4S8KUB8_DENBC6.070e-529.08Uncharacterized protein n=1 Tax=Dendrothele bispor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig818contigS-dermatodea_contig818:3780..6152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig818.16379.1mRNA_S-dermatodea_contig818.16379.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig818 3771..7326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig818.16379.1 ID=prot_S-dermatodea_contig818.16379.1|Name=mRNA_S-dermatodea_contig818.16379.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=196bp
MDSTREGARVRHLRYLMQRTYSYGALLGTLSCGVIVGRQVLWMSEGQEEF
GRGLNRMFPAERRRPGLVFWDKACERFRFVRVHPQPGWEGTTYMVDGWHF
QGHKQLFCRVHTNPNLTTNPLPWEAGPSGAMRFMWNTSIAESTKSWAHAL
GSFLSSMRPCWIQFVFDQLRTVHNDLLVSKWRVQTHRTKPNIVIF*
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