prot_S-dermatodea_contig8147.16343.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8147.16343.1
Unique Nameprot_S-dermatodea_contig8147.16343.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length244
Homology
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 6.690e-72
Identity = 126/195 (64.62%), Postives = 146/195 (74.87%), Query Frame = 0
Query:   23 LDQANKRSSASRSPSISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQ 217
            L  +++R     S +  G     YLSCPFEKVL +VRSR+VLL DGKALL+P Q+P AVVQHFE  LR+ +A+AER LPGVEAD RVA VLRQVR  VD+ + G   R    D RS   ITR NIDQ+AEKHFPLCMRRTLRILRREHHLKYQAR+Q +SFL NAGMEV  +LGLWREEFPKGM  ++Y+RK  Q
Sbjct:  283 LPPSSERKKLPESVAFKGGSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQ 477          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.900e-29
Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 0
Query:   47 LSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFE----EGLRKEMAVA----ERALPGV-EAD-------ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            L  PF++ LR+V  R V++  G AL+   Q+P+  V+ F     + L+ ++ +     ERA  G  EAD       E V AV   VRR          +    G   SS  ++  N+D +A +HFPLC R T + LR++H LKY+AR+Q V FL   G+ V  +L LWR EF + M P++Y +K   YEYS+RH+YGLEGKRK +   SC +I
Sbjct:   66 LVVPFKQALRLVGQRCVVVRGGYALVPFDQIPALAVERFSNVLGQSLQSKLIIRLLAKERADTGQREADTCFSPLNELVDAVGSLVRRMTGT------DDDETGAASSSEEVSLRNLDLLAPRHFPLCARVTFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKK--YEYSIRHLYGLEGKRKDYSPYSCQQI 270          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 120 bits (302), Expect = 2.710e-28
Identity = 74/202 (36.63%), Postives = 110/202 (54.46%), Query Frame = 0
Query:   43 ASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEAD-ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            +SRY   PF +  R+V  R VLLV+G A +    +    V HF++ LR ++    R+LP  +AD ER++  L ++  E  +    R+    +   ++ + +T  NIDQ+AEKHFPLCM+   R  R  HHLKY  R+Q+  FL   G  V   +  +R+EF K +    + R   +Y Y +RH YGLEG RK +    C +I
Sbjct:  143 SSRYFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPARS----ILQPKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDR---EYAYHIRHSYGLEGSRKDYAPLDCQQI 337          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A165H454_9APHY (DNA primase large subunit n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165H454_9APHY)

HSP 1 Score: 120 bits (301), Expect = 7.150e-28
Identity = 75/213 (35.21%), Postives = 117/213 (54.93%), Query Frame = 0
Query:   32 ASRSPSISGAPAS-RYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            A+ SP++  A  S RY    + +V  +V  R+VLL  G A +   +  S V Q F+  L K + +  +ALP ++ D R+  +L  + +   AG+   ++  +     S+  IT   ID +A KHFPLCMR     LRREHHLK+  R+Q+  FL   G+ +   +  WR  F   M+ + ++   K+Y Y++RH YGLEGKR  + ++SC +I
Sbjct:  174 AAASPALKDAALSERYYKVKWTRVPDLVEKRRVLLKGGMAYVPSREQSSIVFQEFQTRLTKALEMTAKALPRLDEDTRIVPILDNLSQGFLAGV---SSEWSTATSSSAGEITADMIDDLARKHFPLCMRNLHETLRREHHLKHFGRLQYGLFLKVLGLSIDEAITFWRRSF-SNMQDDKFN---KEYRYNIRHSYGLEGKRANYPAKSCQQI 379          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 116 bits (291), Expect = 2.110e-26
Identity = 72/207 (34.78%), Postives = 107/207 (51.69%), Query Frame = 0
Query:   37 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            S++   AS++   PF +VL ++++R+V L  G A +    +   VV  +   L   +AV  RALP +E D R+ ++L  + +            S  G+      IT   ID +++  FPLCMR     LR+ HHLKY  R+Q+  FL   G+ +   L  WREEF K M  + +    KQY Y++R+ YG EGKR  F   SC +I
Sbjct:  182 SLTKVLASKFYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLSTLHQRYIGTDYSNKKASFTGE------ITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFD---KQYTYNIRYNYGKEGKRANFSPYSCVKI 379          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A067MHZ5_9AGAM (DNA primase large subunit n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MHZ5_9AGAM)

HSP 1 Score: 115 bits (289), Expect = 2.970e-26
Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 0
Query:   46 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAI----TRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            Y   P+ +V  +V +R+V L  G A +     P+ + Q F++ L + +    +ALP ++ D+R+  +L  + +   AG+ G        +YR+   I    T   +D+IA KHFP+CMR     LR + HLK+  R+QF  FL   G+ V   +  WR+ + + M  + ++   K+Y+Y++RH YGLEGKR  + + +C RI
Sbjct:  176 YYKVPWTQVPDLVATRRVYLKGGFAYVPLSLQPNIIYQKFQQNLERALEQTAKALPRLDEDDRLVPILEHLSKGFVAGVSG--------EYRAGEGIDGEVTADMVDEIARKHFPMCMRSLHETLRADRHLKHAGRLQFTLFLKAMGVSVEEAIVFWRKGYGQSMTDDKFN---KEYKYNIRHSYGLEGKRADYPAMNCQRI 366          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A166NA43_9AGAM (DNA primase large subunit n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166NA43_9AGAM)

HSP 1 Score: 115 bits (287), Expect = 6.070e-26
Identity = 67/198 (33.84%), Postives = 109/198 (55.05%), Query Frame = 0
Query:   46 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            ++   F +VL +V  R+V L+ G A +   +  S V   +E+ L K + +  +ALP ++ D R+  +L  + +   AG    +  +   D      IT   ID++A+KHFPLCMR   R LR   HLK+  R+Q+  FL   G+ +   +  WR+ F K M  + ++   K+Y+Y++RH YGLEGKR  + ++SC +I
Sbjct:  182 FVKVKFTRVLNLVERRKVFLLGGWAYVPEVERSSIVFNEYEKYLTKALELTAKALPRLDEDSRLVPILSNLSQGFLAG--APSEWAGASDATDVDGITADMIDELAQKHFPLCMRNLHRELRDSDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFLKRMNEDKFN---KEYKYNIRHSYGLEGKRANYAAKSCQQI 374          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: UPI0019042926 (eukaryotic and archaeal DNA primase, large subunit-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019042926)

HSP 1 Score: 114 bits (286), Expect = 8.500e-26
Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 0
Query:   46 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSC 240
            +   P+ KV  +V  R+V L  G A +      S + Q F+  L   + +  RALP ++ D+R+  ++    +   AG+ G + RS VG Y    A+T   ID +A KHFPLCMR     LR+  HLK+Q R+Q+  FL   G+ +   +  WR  +   M  + ++   K+Y Y++RH YGLEG RK + ++ C
Sbjct:  187 FYRVPWTKVTDLVAQRRVFLKRGHAYVPSTLQSSIIFQEFQARLANALELTARALPRLDEDDRLLPIITHFSQGFLAGVAGEHGRS-VGQYGD--AVTADMIDDLAWKHFPLCMRHVHGGLRQNRHLKHQGRLQYTLFLKVLGLPIDEAIHFWRASYGNTMSDDRFN---KEYRYNIRHSYGLEGGRKNYPARDC 375          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 114 bits (286), Expect = 1.000e-25
Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 0
Query:   37 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            SI    A+++   PF +VL +V++R+V L  G A +    +   V+  +   L   +A+  RALP +E D R+ ++L  + +            + +GD      +T   ID +++  FPLCMR     LR+ HHLKY  R+Q+  FL   G+ +   L  WREEF K M   D  +  KQY Y++R+ YG EGKR  F   SC +I
Sbjct:  181 SIQKVNAAKFYKVPFIEVLDLVKNRKVFLEKGYAYIPEDDLVITVLSAYRAHLSHALAITSRALPQLEEDTRLISMLSTLHQRYIGTDYTNKKPNFIGD------VTPDQIDSLSKTSFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVM---DVDKFDKQYTYNIRYNYGKEGKRANFSPYSCMKI 378          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A0S7IPF4_9TELE (DNA primase large subunit (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IPF4_9TELE)

HSP 1 Score: 111 bits (277), Expect = 2.690e-25
Identity = 69/198 (34.85%), Postives = 108/198 (54.55%), Query Frame = 0
Query:   50 PFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVG-DY---RSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 243
            PF+  L +VR+R+V L +G A +  +++ + V+  F   L K +A+  R LP V +DER+  +L  +            + S +G DY   ++   I+   ID +A K FPLCMR+  + LR +HHL++  R+Q+  FL   G+ +   L  WR EF +G    D  +  K Y YS+RHM+G EGKR  +   SC ++
Sbjct:   19 PFQDALDLVRTRKVYLKEGYAYIPQYEIVTIVLNDFRTRLSKALALTARTLPAVHSDERLQPLLNHL------------SHSYLGQDYSVQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRDQHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFTRGKVEAD--KFDKAYAYSIRHMFGKEGKRTDYTPYSCMKV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI6.690e-7264.62Similar to DNA primase large subunit, partial n=2 ... [more]
A0A7S2DU63_9STRA2.900e-2939.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1FD44_PYTOL2.710e-2836.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A165H454_9APHY7.150e-2835.21DNA primase large subunit n=1 Tax=Laetiporus sulph... [more]
A0A2L2YIM2_PARTP2.110e-2634.78DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]
A0A067MHZ5_9AGAM2.970e-2632.67DNA primase large subunit n=1 Tax=Botryobasidium b... [more]
A0A166NA43_9AGAM6.070e-2633.84DNA primase large subunit n=1 Tax=Fibularhizoctoni... [more]
UPI00190429268.500e-2634.36eukaryotic and archaeal DNA primase, large subunit... [more]
A0A4Y2B4J4_ARAVE1.000e-2534.30DNA primase large subunit n=1 Tax=Araneus ventrico... [more]
A0A0S7IPF4_9TELE2.690e-2534.85DNA primase large subunit (Fragment) n=1 Tax=Poeci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 48..243
e-value: 1.4E-38
score: 132.8
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 43..243
NoneNo IPR availableGENE3D1.20.930.80coord: 17..116
e-value: 1.6E-14
score: 55.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8147contigS-dermatodea_contig8147:770..3394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8147.16343.1mRNA_S-dermatodea_contig8147.16343.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8147 770..3396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8147.16343.1 ID=prot_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=244bp
GACKRRREYPSQGHPTSRARGGLDQANKRSSASRSPSISGAPASRYLSCP
FEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERAL
PGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQI
AEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWRE
EFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc