mRNA_S-dermatodea_contig8147.16343.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI) HSP 1 Score: 236 bits (602), Expect = 6.690e-72 Identity = 126/195 (64.62%), Postives = 146/195 (74.87%), Query Frame = 1
Query: 67 LDQANKRSSASRSPSISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQ 651
L +++R S + G YLSCPFEKVL +VRSR+VLL DGKALL+P Q+P AVVQHFE LR+ +A+AER LPGVEAD RVA VLRQVR VD+ + G R D RS ITR NIDQ+AEKHFPLCMRRTLRILRREHHLKYQAR+Q +SFL NAGMEV +LGLWREEFPKGM ++Y+RK Q
Sbjct: 283 LPPSSERKKLPESVAFKGGSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQ 477
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.900e-29 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1
Query: 139 LSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFE----EGLRKEMAVA----ERALPGV-EAD-------ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
L PF++ LR+V R V++ G AL+ Q+P+ V+ F + L+ ++ + ERA G EAD E V AV VRR + G SS ++ N+D +A +HFPLC R T + LR++H LKY+AR+Q V FL G+ V +L LWR EF + M P++Y +K YEYS+RH+YGLEGKRK + SC +I
Sbjct: 66 LVVPFKQALRLVGQRCVVVRGGYALVPFDQIPALAVERFSNVLGQSLQSKLIIRLLAKERADTGQREADTCFSPLNELVDAVGSLVRRMTGT------DDDETGAASSSEEVSLRNLDLLAPRHFPLCARVTFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKK--YEYSIRHLYGLEGKRKDYSPYSCQQI 270
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL) HSP 1 Score: 120 bits (302), Expect = 2.710e-28 Identity = 74/202 (36.63%), Postives = 110/202 (54.46%), Query Frame = 1
Query: 127 ASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEAD-ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
+SRY PF + R+V R VLLV+G A + + V HF++ LR ++ R+LP +AD ER++ L ++ E + R+ + ++ + +T NIDQ+AEKHFPLCM+ R R HHLKY R+Q+ FL G V + +R+EF K + + R +Y Y +RH YGLEG RK + C +I
Sbjct: 143 SSRYFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPARS----ILQPKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDR---EYAYHIRHSYGLEGSRKDYAPLDCQQI 337
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A165H454_9APHY (DNA primase large subunit n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165H454_9APHY) HSP 1 Score: 120 bits (301), Expect = 7.150e-28 Identity = 75/213 (35.21%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 94 ASRSPSISGAPAS-RYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
A+ SP++ A S RY + +V +V R+VLL G A + + S V Q F+ L K + + +ALP ++ D R+ +L + + AG+ ++ + S+ IT ID +A KHFPLCMR LRREHHLK+ R+Q+ FL G+ + + WR F M+ + ++ K+Y Y++RH YGLEGKR + ++SC +I
Sbjct: 174 AAASPALKDAALSERYYKVKWTRVPDLVEKRRVLLKGGMAYVPSREQSSIVFQEFQTRLTKALEMTAKALPRLDEDTRIVPILDNLSQGFLAGV---SSEWSTATSSSAGEITADMIDDLARKHFPLCMRNLHETLRREHHLKHFGRLQYGLFLKVLGLSIDEAITFWRRSF-SNMQDDKFN---KEYRYNIRHSYGLEGKRANYPAKSCQQI 379
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP) HSP 1 Score: 116 bits (291), Expect = 2.110e-26 Identity = 72/207 (34.78%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 109 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
S++ AS++ PF +VL ++++R+V L G A + + VV + L +AV RALP +E D R+ ++L + + S G+ IT ID +++ FPLCMR LR+ HHLKY R+Q+ FL G+ + L WREEF K M + + KQY Y++R+ YG EGKR F SC +I
Sbjct: 182 SLTKVLASKFYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLSTLHQRYIGTDYSNKKASFTGE------ITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFD---KQYTYNIRYNYGKEGKRANFSPYSCVKI 379
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A067MHZ5_9AGAM (DNA primase large subunit n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MHZ5_9AGAM) HSP 1 Score: 115 bits (289), Expect = 2.970e-26 Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 1
Query: 136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAI----TRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
Y P+ +V +V +R+V L G A + P+ + Q F++ L + + +ALP ++ D+R+ +L + + AG+ G +YR+ I T +D+IA KHFP+CMR LR + HLK+ R+QF FL G+ V + WR+ + + M + ++ K+Y+Y++RH YGLEGKR + + +C RI
Sbjct: 176 YYKVPWTQVPDLVATRRVYLKGGFAYVPLSLQPNIIYQKFQQNLERALEQTAKALPRLDEDDRLVPILEHLSKGFVAGVSG--------EYRAGEGIDGEVTADMVDEIARKHFPMCMRSLHETLRADRHLKHAGRLQFTLFLKAMGVSVEEAIVFWRKGYGQSMTDDKFN---KEYKYNIRHSYGLEGKRADYPAMNCQRI 366
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A166NA43_9AGAM (DNA primase large subunit n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166NA43_9AGAM) HSP 1 Score: 115 bits (287), Expect = 6.070e-26 Identity = 67/198 (33.84%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
++ F +VL +V R+V L+ G A + + S V +E+ L K + + +ALP ++ D R+ +L + + AG + + D IT ID++A+KHFPLCMR R LR HLK+ R+Q+ FL G+ + + WR+ F K M + ++ K+Y+Y++RH YGLEGKR + ++SC +I
Sbjct: 182 FVKVKFTRVLNLVERRKVFLLGGWAYVPEVERSSIVFNEYEKYLTKALELTAKALPRLDEDSRLVPILSNLSQGFLAG--APSEWAGASDATDVDGITADMIDELAQKHFPLCMRNLHRELRDSDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFLKRMNEDKFN---KEYKYNIRHSYGLEGKRANYAAKSCQQI 374
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: UPI0019042926 (eukaryotic and archaeal DNA primase, large subunit-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019042926) HSP 1 Score: 114 bits (286), Expect = 8.500e-26 Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 1
Query: 136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSC 720
+ P+ KV +V R+V L G A + S + Q F+ L + + RALP ++ D+R+ ++ + AG+ G + RS VG Y A+T ID +A KHFPLCMR LR+ HLK+Q R+Q+ FL G+ + + WR + M + ++ K+Y Y++RH YGLEG RK + ++ C
Sbjct: 187 FYRVPWTKVTDLVAQRRVFLKRGHAYVPSTLQSSIIFQEFQARLANALELTARALPRLDEDDRLLPIITHFSQGFLAGVAGEHGRS-VGQYGD--AVTADMIDDLAWKHFPLCMRHVHGGLRQNRHLKHQGRLQYTLFLKVLGLPIDEAIHFWRASYGNTMSDDRFN---KEYRYNIRHSYGLEGGRKNYPARDC 375
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE) HSP 1 Score: 114 bits (286), Expect = 1.000e-25 Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 109 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
SI A+++ PF +VL +V++R+V L G A + + V+ + L +A+ RALP +E D R+ ++L + + + +GD +T ID +++ FPLCMR LR+ HHLKY R+Q+ FL G+ + L WREEF K M D + KQY Y++R+ YG EGKR F SC +I
Sbjct: 181 SIQKVNAAKFYKVPFIEVLDLVKNRKVFLEKGYAYIPEDDLVITVLSAYRAHLSHALAITSRALPQLEEDTRLISMLSTLHQRYIGTDYTNKKPNFIGD------VTPDQIDSLSKTSFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVM---DVDKFDKQYTYNIRYNYGKEGKRANFSPYSCMKI 378
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A0S7IPF4_9TELE (DNA primase large subunit (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IPF4_9TELE) HSP 1 Score: 111 bits (277), Expect = 2.690e-25 Identity = 69/198 (34.85%), Postives = 108/198 (54.55%), Query Frame = 1
Query: 148 PFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVG-DY---RSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
PF+ L +VR+R+V L +G A + +++ + V+ F L K +A+ R LP V +DER+ +L + + S +G DY ++ I+ ID +A K FPLCMR+ + LR +HHL++ R+Q+ FL G+ + L WR EF +G D + K Y YS+RHM+G EGKR + SC ++
Sbjct: 19 PFQDALDLVRTRKVYLKEGYAYIPQYEIVTIVLNDFRTRLSKALALTARTLPAVHSDERLQPLLNHL------------SHSYLGQDYSVQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRDQHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFTRGKVEAD--KFDKAYAYSIRHMFGKEGKRTDYTPYSCMKV 202 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8147.16343.1 >prot_S-dermatodea_contig8147.16343.1 ID=prot_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=244bp GACKRRREYPSQGHPTSRARGGLDQANKRSSASRSPSISGAPASRYLSCPback to top mRNA from alignment at S-dermatodea_contig8147:770..3396+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8147.16343.1 ID=mRNA_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2627bp|location=Sequence derived from alignment at S-dermatodea_contig8147:770..3396+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8147:770..3396+ >mRNA_S-dermatodea_contig8147.16343.1 ID=mRNA_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at S-dermatodea_contig8147:770..3396+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |