mRNA_S-dermatodea_contig8147.16343.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8147.16343.1
Unique NamemRNA_S-dermatodea_contig8147.16343.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 6.690e-72
Identity = 126/195 (64.62%), Postives = 146/195 (74.87%), Query Frame = 1
Query:   67 LDQANKRSSASRSPSISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQ 651
            L  +++R     S +  G     YLSCPFEKVL +VRSR+VLL DGKALL+P Q+P AVVQHFE  LR+ +A+AER LPGVEAD RVA VLRQVR  VD+ + G   R    D RS   ITR NIDQ+AEKHFPLCMRRTLRILRREHHLKYQAR+Q +SFL NAGMEV  +LGLWREEFPKGM  ++Y+RK  Q
Sbjct:  283 LPPSSERKKLPESVAFKGGSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQ 477          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.900e-29
Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1
Query:  139 LSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFE----EGLRKEMAVA----ERALPGV-EAD-------ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            L  PF++ LR+V  R V++  G AL+   Q+P+  V+ F     + L+ ++ +     ERA  G  EAD       E V AV   VRR          +    G   SS  ++  N+D +A +HFPLC R T + LR++H LKY+AR+Q V FL   G+ V  +L LWR EF + M P++Y +K   YEYS+RH+YGLEGKRK +   SC +I
Sbjct:   66 LVVPFKQALRLVGQRCVVVRGGYALVPFDQIPALAVERFSNVLGQSLQSKLIIRLLAKERADTGQREADTCFSPLNELVDAVGSLVRRMTGT------DDDETGAASSSEEVSLRNLDLLAPRHFPLCARVTFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKK--YEYSIRHLYGLEGKRKDYSPYSCQQI 270          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 120 bits (302), Expect = 2.710e-28
Identity = 74/202 (36.63%), Postives = 110/202 (54.46%), Query Frame = 1
Query:  127 ASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEAD-ERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            +SRY   PF +  R+V  R VLLV+G A +    +    V HF++ LR ++    R+LP  +AD ER++  L ++  E  +    R+    +   ++ + +T  NIDQ+AEKHFPLCM+   R  R  HHLKY  R+Q+  FL   G  V   +  +R+EF K +    + R   +Y Y +RH YGLEG RK +    C +I
Sbjct:  143 SSRYFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSLHPARS----ILQPKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDR---EYAYHIRHSYGLEGSRKDYAPLDCQQI 337          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A165H454_9APHY (DNA primase large subunit n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165H454_9APHY)

HSP 1 Score: 120 bits (301), Expect = 7.150e-28
Identity = 75/213 (35.21%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   94 ASRSPSISGAPAS-RYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            A+ SP++  A  S RY    + +V  +V  R+VLL  G A +   +  S V Q F+  L K + +  +ALP ++ D R+  +L  + +   AG+   ++  +     S+  IT   ID +A KHFPLCMR     LRREHHLK+  R+Q+  FL   G+ +   +  WR  F   M+ + ++   K+Y Y++RH YGLEGKR  + ++SC +I
Sbjct:  174 AAASPALKDAALSERYYKVKWTRVPDLVEKRRVLLKGGMAYVPSREQSSIVFQEFQTRLTKALEMTAKALPRLDEDTRIVPILDNLSQGFLAGV---SSEWSTATSSSAGEITADMIDDLARKHFPLCMRNLHETLRREHHLKHFGRLQYGLFLKVLGLSIDEAITFWRRSF-SNMQDDKFN---KEYRYNIRHSYGLEGKRANYPAKSCQQI 379          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 116 bits (291), Expect = 2.110e-26
Identity = 72/207 (34.78%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  109 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            S++   AS++   PF +VL ++++R+V L  G A +    +   VV  +   L   +AV  RALP +E D R+ ++L  + +            S  G+      IT   ID +++  FPLCMR     LR+ HHLKY  R+Q+  FL   G+ +   L  WREEF K M  + +    KQY Y++R+ YG EGKR  F   SC +I
Sbjct:  182 SLTKVLASKFYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLSTLHQRYIGTDYSNKKASFTGE------ITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFD---KQYTYNIRYNYGKEGKRANFSPYSCVKI 379          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A067MHZ5_9AGAM (DNA primase large subunit n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MHZ5_9AGAM)

HSP 1 Score: 115 bits (289), Expect = 2.970e-26
Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 1
Query:  136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAI----TRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            Y   P+ +V  +V +R+V L  G A +     P+ + Q F++ L + +    +ALP ++ D+R+  +L  + +   AG+ G        +YR+   I    T   +D+IA KHFP+CMR     LR + HLK+  R+QF  FL   G+ V   +  WR+ + + M  + ++   K+Y+Y++RH YGLEGKR  + + +C RI
Sbjct:  176 YYKVPWTQVPDLVATRRVYLKGGFAYVPLSLQPNIIYQKFQQNLERALEQTAKALPRLDEDDRLVPILEHLSKGFVAGVSG--------EYRAGEGIDGEVTADMVDEIARKHFPMCMRSLHETLRADRHLKHAGRLQFTLFLKAMGVSVEEAIVFWRKGYGQSMTDDKFN---KEYKYNIRHSYGLEGKRADYPAMNCQRI 366          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A166NA43_9AGAM (DNA primase large subunit n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166NA43_9AGAM)

HSP 1 Score: 115 bits (287), Expect = 6.070e-26
Identity = 67/198 (33.84%), Postives = 109/198 (55.05%), Query Frame = 1
Query:  136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            ++   F +VL +V  R+V L+ G A +   +  S V   +E+ L K + +  +ALP ++ D R+  +L  + +   AG    +  +   D      IT   ID++A+KHFPLCMR   R LR   HLK+  R+Q+  FL   G+ +   +  WR+ F K M  + ++   K+Y+Y++RH YGLEGKR  + ++SC +I
Sbjct:  182 FVKVKFTRVLNLVERRKVFLLGGWAYVPEVERSSIVFNEYEKYLTKALELTAKALPRLDEDSRLVPILSNLSQGFLAG--APSEWAGASDATDVDGITADMIDELAQKHFPLCMRNLHRELRDSDHLKHFGRLQYGLFLKVLGLPIEEAIAFWRKSFLKRMNEDKFN---KEYKYNIRHSYGLEGKRANYAAKSCQQI 374          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: UPI0019042926 (eukaryotic and archaeal DNA primase, large subunit-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019042926)

HSP 1 Score: 114 bits (286), Expect = 8.500e-26
Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 1
Query:  136 YLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSC 720
            +   P+ KV  +V  R+V L  G A +      S + Q F+  L   + +  RALP ++ D+R+  ++    +   AG+ G + RS VG Y    A+T   ID +A KHFPLCMR     LR+  HLK+Q R+Q+  FL   G+ +   +  WR  +   M  + ++   K+Y Y++RH YGLEG RK + ++ C
Sbjct:  187 FYRVPWTKVTDLVAQRRVFLKRGHAYVPSTLQSSIIFQEFQARLANALELTARALPRLDEDDRLLPIITHFSQGFLAGVAGEHGRS-VGQYGD--AVTADMIDDLAWKHFPLCMRHVHGGLRQNRHLKHQGRLQYTLFLKVLGLPIDEAIHFWRASYGNTMSDDRFN---KEYRYNIRHSYGLEGGRKNYPARDC 375          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 114 bits (286), Expect = 1.000e-25
Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  109 SISGAPASRYLSCPFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            SI    A+++   PF +VL +V++R+V L  G A +    +   V+  +   L   +A+  RALP +E D R+ ++L  + +            + +GD      +T   ID +++  FPLCMR     LR+ HHLKY  R+Q+  FL   G+ +   L  WREEF K M   D  +  KQY Y++R+ YG EGKR  F   SC +I
Sbjct:  181 SIQKVNAAKFYKVPFIEVLDLVKNRKVFLEKGYAYIPEDDLVITVLSAYRAHLSHALAITSRALPQLEEDTRLISMLSTLHQRYIGTDYTNKKPNFIGD------VTPDQIDSLSKTSFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVM---DVDKFDKQYTYNIRYNYGKEGKRANFSPYSCMKI 378          
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Match: A0A0S7IPF4_9TELE (DNA primase large subunit (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IPF4_9TELE)

HSP 1 Score: 111 bits (277), Expect = 2.690e-25
Identity = 69/198 (34.85%), Postives = 108/198 (54.55%), Query Frame = 1
Query:  148 PFEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERALPGVEADERVAAVLRQVRREVDAGICGRNNRSAVG-DY---RSSVAITRGNIDQIAEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWREEFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARI 729
            PF+  L +VR+R+V L +G A +  +++ + V+  F   L K +A+  R LP V +DER+  +L  +            + S +G DY   ++   I+   ID +A K FPLCMR+  + LR +HHL++  R+Q+  FL   G+ +   L  WR EF +G    D  +  K Y YS+RHM+G EGKR  +   SC ++
Sbjct:   19 PFQDALDLVRTRKVYLKEGYAYIPQYEIVTIVLNDFRTRLSKALALTARTLPAVHSDERLQPLLNHL------------SHSYLGQDYSVQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRDQHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFTRGKVEAD--KFDKAYAYSIRHMFGKEGKRTDYTPYSCMKV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8147.16343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI6.690e-7264.62Similar to DNA primase large subunit, partial n=2 ... [more]
A0A7S2DU63_9STRA2.900e-2939.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1FD44_PYTOL2.710e-2836.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A165H454_9APHY7.150e-2835.21DNA primase large subunit n=1 Tax=Laetiporus sulph... [more]
A0A2L2YIM2_PARTP2.110e-2634.78DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]
A0A067MHZ5_9AGAM2.970e-2632.67DNA primase large subunit n=1 Tax=Botryobasidium b... [more]
A0A166NA43_9AGAM6.070e-2633.84DNA primase large subunit n=1 Tax=Fibularhizoctoni... [more]
UPI00190429268.500e-2634.36eukaryotic and archaeal DNA primase, large subunit... [more]
A0A4Y2B4J4_ARAVE1.000e-2534.30DNA primase large subunit n=1 Tax=Araneus ventrico... [more]
A0A0S7IPF4_9TELE2.690e-2534.85DNA primase large subunit (Fragment) n=1 Tax=Poeci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8147contigS-dermatodea_contig8147:770..3396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score241.1
Seed ortholog evalue5.3e-61
Seed eggNOG ortholog2880.D7FU99
KEGG rclassRC02795
KEGG koko:K02685
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
EggNOG free text desc.DNA primase activity
EggNOG OGsCOG2219@1,KOG2267@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA primase large subunit, eukaryotic/archaeal
Ec32 orthologEc-18_001420.2
Exons4
Model size734
Cds size732
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8147.16343.1prot_S-dermatodea_contig8147.16343.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8147 770..3394 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925324.2036972-CDS-S-dermatodea_contig8147:769..11141622925324.2036972-CDS-S-dermatodea_contig8147:769..1114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 770..1114 +
1694079855.7452981-CDS-S-dermatodea_contig8147:769..11141694079855.7452981-CDS-S-dermatodea_contig8147:769..1114Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 770..1114 +
1622925324.2149749-CDS-S-dermatodea_contig8147:1453..16781622925324.2149749-CDS-S-dermatodea_contig8147:1453..1678Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 1454..1678 +
1694079855.7591565-CDS-S-dermatodea_contig8147:1453..16781694079855.7591565-CDS-S-dermatodea_contig8147:1453..1678Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 1454..1678 +
1622925324.2233543-CDS-S-dermatodea_contig8147:2637..27171622925324.2233543-CDS-S-dermatodea_contig8147:2637..2717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 2638..2717 +
1694079855.769219-CDS-S-dermatodea_contig8147:2637..27171694079855.769219-CDS-S-dermatodea_contig8147:2637..2717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 2638..2717 +
1622925324.231998-CDS-S-dermatodea_contig8147:3312..33941622925324.231998-CDS-S-dermatodea_contig8147:3312..3394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 3313..3394 +
1694079855.7777715-CDS-S-dermatodea_contig8147:3312..33941694079855.7777715-CDS-S-dermatodea_contig8147:3312..3394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8147 3313..3394 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8147.16343.1

>prot_S-dermatodea_contig8147.16343.1 ID=prot_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=244bp
GACKRRREYPSQGHPTSRARGGLDQANKRSSASRSPSISGAPASRYLSCP
FEKVLRMVRSRQVLLVDGKALLAPWQVPSAVVQHFEEGLRKEMAVAERAL
PGVEADERVAAVLRQVRREVDAGICGRNNRSAVGDYRSSVAITRGNIDQI
AEKHFPLCMRRTLRILRREHHLKYQARIQFVSFLGNAGMEVGGLLGLWRE
EFPKGMRPEDYSRKSKQYEYSVRHMYGLEGKRKAFKSQSCARIA
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mRNA from alignment at S-dermatodea_contig8147:770..3396+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8147.16343.1 ID=mRNA_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2627bp|location=Sequence derived from alignment at S-dermatodea_contig8147:770..3396+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCGCGTGTAAGCGCCGGCGAGAATATCCCTCTCAGGGGCACCCCACTTC GCGCGCCAGGGGGGGGCTGGATCAGGCCAACAAGAGATCCTCTGCAAGTC GTTCCCCGTCTATTTCAGGCGCTCCAGCTTCCAGGTACCTCTCATGCCCG TTCGAGAAAGTTCTTCGGATGGTGAGGTCTCGGCAAGTTCTGCTGGTGGA TGGGAAGGCGTTGCTGGCGCCATGGCAGGTCCCCTCCGCCGTGGTCCAGC ACTTCGAAGAGGGTCTGCGGAAGGAGATGGCAGTGGCGGAGCGGGCCTTG CCAGGGGTTGAGGCTGACGAGAGGGTAGCGGCCGTTCTGAGGCAGGTAAG ATAGGGATACAAGTGTTGCTCGCCTCGCTTTTCGACCTTGGGAGCGGGGT ACGTCGCGTTGCCCGTTCCGCCTCTCGCGCTGTGCAGATTGCTTTCCCGA GGCTTGTGTTTCGGACTTTCCCGTGTACCTGTAGAGCTATTCGCTTCCAG GCGCGCCAAAGAAATATATGTTAGACTGCGACCCGGTCCTGTTCAGTGTG ATGTAAGAACGGTCGGAGTCTTCCCCGTCTGCTGTATTTGTGTAGCCCTT TCCCCCCGTGTGCCGTCGCTCGCCCCTTCGTGCACCGCGTAAATTATTAC AATGGCGATTTTGCCCGTTTTTCTGCCGTGGCAGGTGAGGAGGGAAGTCG ACGCCGGTATTTGCGGGAGGAACAACCGCAGCGCCGTCGGCGACTATCGC TCCTCTGTAGCCATCACGAGAGGAAACATCGATCAGATCGCAGAGAAGCA CTTCCCGCTCTGCATGCGGCGGACCCTCCGCATCCTGCGACGGGAGCATC ACCTCAAGTACCAAGCGAGGATTCAGTTCGTCAGCTTCCTCGGAAACGCT GGGATGGAGGTGAGACCCGCGGAAGTTCGGCCTATTAATAGTGCGTGCAG GGTGAGACACCGCGTTGCTAGTCCGTGTTTTTCTCGTTTCTGCGGGTCGG AGGGGTGTGTGCGGTAACAGGATCACGCGGGTCAATTGTTGTTGCTGGTG CCACGACTCGGTTGCTGCGGTCCTGTTGGGCACTTCAGGGTGTTGGCTTT CTCGTGCTAGAAGGAGATTATCTTGAAATACATGGACCGGCACGGCCAGT GCCATTGCTTATCCTGCTGGTGCTGCCTGTCGGAGGATTAACCGCAACTC CAACGTTTGGCATTTAATTTTTGTGCACTACATGTCATACTTTTTGTGTA TGTTCGTTTGGTTATTCCCTGTTTCTTCTTAGCTAACCGCGGCTGGGATT GTATGAACAATGAATGGCACAGACGGCGGCGTGTCCATGTGTAATTTTGT TGTTGCTGCAGTTTGAACACAGGGTGCAGACTCGGCGATATCTAGATTAT TATTTTTTTGTGTATTTTGTGTATATGGGCGTTCTCTTTTCGTTTCTTTT GGTCACGGCCTTGGTGAGTACATCGGATGTTCGACATCGCTACCACTCGG CAGAGGTTTAAGCTCCTATGATATGCTACACTGCTGTGCGGTGCAGCAGG CTGACGTGCTGCACCTATTAATAGGAACAGAGGCCGCCCTTGTCGGGTGG GCTCCCTGCGCCGATTGCGTCGCTGTTGAATTGGAAGCGATAGGTGCATA GGCCTCCCGTTCGTTCCAAGTGTGCACATTAGGGTGGGAGGGGCGTCGCT CTGCTTGTGCACCGTGGCTGGTTGCCTCGCCGTGCGTTGAACCTTGGCAA TTCCCTCAGGCCAAGGAATCGGCAGTATTCAGCACACGTCCCGCTGTGTT TCCTCGTGGGTATCTCGCTTAACCAACGATAACGCAATGTTCGTCGATTT TGTCGCCCCTGTTGGCAGGTGGGGGGGCTGCTCGGCCTGTGGCGAGAAGA GTTCCCCAAGGGCATGCGGCCGGAGGACTACTCTCGAAAGAGCAAGCAGC TAAGAACCCCATCACAGCCCTTAGTAGCTGAAAGGCCAACAATCCTTCCG TGCTCTCTACCCTCTGTACTTGGTGAACGTGCATCGAACACAATTAGCTA TCATAGCGCCGGGAGGTGTACGACGACCTTGCGTTGAATGCTGCCGTAGA TCGATTGCAGGGGCCATGATATACTTTGGCGATCACCCCGGCGGAGAGAA AATGCCGTGTCGAGGCTAGATGAACCGAGGTGTTGCTCCCGTTGGTCGAC AATGCTACATCATGCGCTCGACCCTGTTGTAGGCGTGGTCGTCAAAGCAT GGCGCTTACCAAGTTCGACCAGCATAGCCGTTTCCTTTCGACCACCTTCC GCCCAAGTGAAAGTCTACAAGCGCGTCAGAAGAAAGACATCGCGGTCAGC CTTTAGTCCTCACAATTATCGCCGCCCCCCGCAAAAGTATCGTAAGTTTG TCTTCCACCCCCGCAAGGACGTACGACTCGCCCCATTCTCAGGTGCGCCG CTGAAAACCTAGCGCAAGCTGAATAGGCCTCTGACAGTTACCACGACGAT TTCCCTCGGCTTTTTCTCTATTTCCTGCTTCCCACCACATCAGGTACGAA TACAGCGTGAGACACATGTACGGCCTCGAAGGCAAACGGAAGGCTTTCAA ATCGCAATCTTGCGCGCGGATCGCCTC
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Coding sequence (CDS) from alignment at S-dermatodea_contig8147:770..3396+

>mRNA_S-dermatodea_contig8147.16343.1 ID=mRNA_S-dermatodea_contig8147.16343.1|Name=mRNA_S-dermatodea_contig8147.16343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at S-dermatodea_contig8147:770..3396+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGCGCGTGTAAGCGCCGGCGAGAATATCCCTCTCAGGGGCACCCCACTTC
GCGCGCCAGGGGGGGGCTGGATCAGGCCAACAAGAGATCCTCTGCAAGTC
GTTCCCCGTCTATTTCAGGCGCTCCAGCTTCCAGGTACCTCTCATGCCCG
TTCGAGAAAGTTCTTCGGATGGTGAGGTCTCGGCAAGTTCTGCTGGTGGA
TGGGAAGGCGTTGCTGGCGCCATGGCAGGTCCCCTCCGCCGTGGTCCAGC
ACTTCGAAGAGGGTCTGCGGAAGGAGATGGCAGTGGCGGAGCGGGCCTTG
CCAGGGGTTGAGGCTGACGAGAGGGTAGCGGCCGTTCTGAGGCAGGGCGC
GTGTAAGCGCCGGCGAGAATATCCCTCTCAGGGGCACCCCACTTCGCGCG
CCAGGGGGGGGCTGGATCAGGCCAACAAGAGATCCTCTGCAAGTCGTTCC
CCGTCTATTTCAGGCGCTCCAGCTTCCAGGTACCTCTCATGCCCGTTCGA
GAAAGTTCTTCGGATGGTGAGGTCTCGGCAAGTTCTGCTGGTGGATGGGA
AGGCGTTGCTGGCGCCATGGCAGGTCCCCTCCGCCGTGGTCCAGCACTTC
GAAGAGGGTCTGCGGAAGGAGATGGCAGTGGCGGAGCGGGCCTTGCCAGG
GGTTGAGGCTGACGAGAGGGTAGCGGCCGTTCTGAGGCAGGTGAGGAGGG
AAGTCGACGCCGGTATTTGCGGGAGGAACAACCGCAGCGCCGTCGGCGAC
TATCGCTCCTCTGTAGCCATCACGAGAGGAAACATCGATCAGATCGCAGA
GAAGCACTTCCCGCTCTGCATGCGGCGGACCCTCCGCATCCTGCGACGGG
AGCATCACCTCAAGTACCAAGCGAGGATTCAGTTCGTCAGCTTCCTCGGA
AACGCTGGGATGGAGGTGAGGAGGGAAGTCGACGCCGGTATTTGCGGGAG
GAACAACCGCAGCGCCGTCGGCGACTATCGCTCCTCTGTAGCCATCACGA
GAGGAAACATCGATCAGATCGCAGAGAAGCACTTCCCGCTCTGCATGCGG
CGGACCCTCCGCATCCTGCGACGGGAGCATCACCTCAAGTACCAAGCGAG
GATTCAGTTCGTCAGCTTCCTCGGAAACGCTGGGATGGAGGTGGGGGGGC
TGCTCGGCCTGTGGCGAGAAGAGTTCCCCAAGGGCATGCGGCCGGAGGAC
TACTCTCGAAAGAGCAAGCAGTGGGGGGGCTGCTCGGCCTGTGGCGAGAA
GAGTTCCCCAAGGGCATGCGGCCGGAGGACTACTCTCGAAAGAGCAAGCA
GTACGAATACAGCGTGAGACACATGTACGGCCTCGAAGGCAAACGGAAGG
CTTTCAAATCGCAATCTTGCGCGCGGATCGCCGTACGAATACAGCGTGAG
ACACATGTACGGCCTCGAAGGCAAACGGAAGGCTTTCAAATCGCAATCTT
GCGCGCGGATCGCC
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