mRNA_S-dermatodea_contig8110.16307.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A6H5L9L5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9L5_9PHAE) HSP 1 Score: 183 bits (465), Expect = 4.960e-54 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAAR 300
RASSSGAT+PFAV+DFLFREDLYSLGYVFLELVFGAFC KS+RPDQN+LKRLLEDIFKGDFKAFKDYCLT P WE A+EVLDADRGSGWGLAT+LL AR
Sbjct: 316 RASSSGATSPFAVSDFLFREDLYSLGYVFLELVFGAFCDDKSKRPDQNSLKRLLEDIFKGDFKAFKDYCLTEPAWEPAVEVLDADRGSGWGLATALLQAR 415
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A2V3IFG9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFG9_9FLOR) HSP 1 Score: 90.9 bits (224), Expect = 3.320e-21 Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAAR 300
RA +GA TP + F F ED+Y+LGY FLEL+F +F Q+ K+L ED FK D AF++YC PEW A+E LD+ GW L +L AR
Sbjct: 37 RARKAGAVTPATIAAFHFAEDIYALGYSFLELIFSSF---SGVPVPQDRFKKLFEDTFKLDVNAFREYCKQDPEWSSAVEFLDSQSQGGWELMKCMLRAR 133
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: R7Q3P8_CHOCR (Protein kinase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3P8_CHOCR) HSP 1 Score: 82.8 bits (203), Expect = 1.830e-16 Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAAR 300
+A +GA TP + F +D+Y+LGY FLE++F ++ + Q+ K L ED F+ D F+ YC PEW +A+ +LD D G+GW L ++L +R
Sbjct: 302 KARKAGAVTPGEIASFYNADDIYALGYAFLEVIFSSY---GGKPVTQDRFKVLFEDTFELDVSNFRQYCAEDPEWTEAVSLLDKDDGAGWDLLKTMLGSR 398
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A7S3ECV9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECV9_9RHOD) HSP 1 Score: 75.5 bits (184), Expect = 7.290e-14 Identity = 33/100 (33.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVS-KSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAA 297
+A SGA++P V+ + F +D+Y+LGY F+E++FG+ S + Q A KRL ED+++ + ++Y + +A++ LD D +GW L +++L++
Sbjct: 282 KARESGASSPTEVSRYFFADDIYALGYAFMEIIFGSLSESGPGPQTTQEAFKRLFEDVYERNVANLREYISADENYSEAVQFLDQDSFAGWNLISAMLSS 381
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: UPI0009010F03 (uncharacterized protein LOC104705975 isoform X1 n=6 Tax=Camelina sativa TaxID=90675 RepID=UPI0009010F03) HSP 1 Score: 66.6 bits (161), Expect = 1.040e-10 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAA 297
RA++SGA T F F +D+Y G +F L F FC ++ D +L+RLLE+ F+ D +A ++YCL E+A++ LD +GW L ++L A
Sbjct: 307 RATASGAFTVFEKRAFGIADDIYEAGLLFAYLAFVPFC--EAGVMDSLSLQRLLENTFRLDMEAVREYCLADERLEEAVKFLDLGDRAGWELLQAMLNA 403
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A178UAA2_ARATH (Protein kinase domain-containing protein n=15 Tax=Brassicaceae TaxID=3700 RepID=A0A178UAA2_ARATH) HSP 1 Score: 65.9 bits (159), Expect = 1.990e-10 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAA 297
RA+++GA T F F +D+Y G +F L F FC ++ D +L+RLLE+ F+ D +A ++YCL E+A++ LD +GW L ++L A
Sbjct: 351 RANAAGAYTVFEKRAFGIADDIYEAGLLFAYLAFVPFC--EAGVTDSLSLQRLLENTFRLDIEAVREYCLADERLEEAVKFLDLGDRAGWELLQAMLNA 447
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A0K9PE06_ZOSMR (Protein kinase domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PE06_ZOSMR) HSP 1 Score: 65.5 bits (158), Expect = 2.690e-10 Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLL 291
RA ++GA T F F +D+Y G + L F FC + S D +++RLLE+ FK D +A ++YCL +A+ LD+ G+GW L ++L
Sbjct: 320 RAKAAGAFTVLEKRSFAFADDIYEAGLLIAYLSFVPFCEAGSM--DGLSIQRLLENTFKLDLEAAREYCLADDRLVEAVNFLDSGDGAGWQLLQAML 414
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: UPI00053C0DA2 (uncharacterized protein LOC104820893 isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0DA2) HSP 1 Score: 65.5 bits (158), Expect = 2.690e-10 Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAA 297
RASSSGA + F +D+Y G +F L F FC + D +L+RLLE+ F+ D A ++YCL E+A+ LD G+GW L ++L A
Sbjct: 325 RASSSGAFSILEKRAFGIADDIYEAGLLFAYLAFIPFC--EVGVMDSLSLQRLLENTFRLDLDAVREYCLADERLEEAVRFLDIGDGAGWDLLQAMLNA 421
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A1E7FEK6_9STRA (Protein kinase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEK6_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.770e-10 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 25 TPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRP----------DQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLLAAR 300
T +T+F EDL++LG+VFL G VS + P D++ +++LL +IFK DF+AF++Y WE+ + +LD G+GW + +L AR
Sbjct: 428 TSLTMTNFAMAEDLHALGFVFL----GLLLVSLADLPENANAPMPNTDEDTIQKLLNEIFKLDFQAFREYVEAEEVWEKLVLLLDEKDGAGWTVLETLFKAR 525
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Match: A0A453PBB5_AEGTS (Protein kinase domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PBB5_AEGTS) HSP 1 Score: 64.7 bits (156), Expect = 2.810e-10 Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALKRLLEDIFKGDFKAFKDYCLTIPEWEQAIEVLDADRGSGWGLATSLL 291
RAS++GA+TP F +D+Y G + + F FC K+ D +L+RLLE+ F+ D A ++YCL + +A+ LD G+GW L ++L
Sbjct: 145 RASAAGASTPLEKRAFGVADDIYGAGLLIAYMAFIPFC--KAGIMDGISLQRLLENTFRLDIYAAREYCLEDDKLSEAVNFLDLGDGAGWELLQAML 239 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8110.16307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8110.16307.1 >prot_S-dermatodea_contig8110.16307.1 ID=prot_S-dermatodea_contig8110.16307.1|Name=mRNA_S-dermatodea_contig8110.16307.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=100bp RASSSGATTPFAVTDFLFREDLYSLGYVFLELVFGAFCVSKSQRPDQNALback to top mRNA from alignment at S-dermatodea_contig8110:1557..1856+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8110.16307.1 ID=mRNA_S-dermatodea_contig8110.16307.1|Name=mRNA_S-dermatodea_contig8110.16307.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=300bp|location=Sequence derived from alignment at S-dermatodea_contig8110:1557..1856+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8110:1557..1856+ >mRNA_S-dermatodea_contig8110.16307.1 ID=mRNA_S-dermatodea_contig8110.16307.1|Name=mRNA_S-dermatodea_contig8110.16307.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at S-dermatodea_contig8110:1557..1856+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |