prot_S-dermatodea_contig807.16259.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig807.16259.1
Unique Nameprot_S-dermatodea_contig807.16259.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length356
Homology
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 4.770e-126
Identity = 210/402 (52.24%), Postives = 267/402 (66.42%), Query Frame = 0
Query:    3 SAVCDKVWKELRKLRE--VPPLESPQDTYK--------YTDYQAYTACNEVRNLLGPCSELPRDEFLAVFAGLVAGPRMEELLGLFRSSQS--HPALRYACLLALHGAAELSEERELMVSHAELPSALLSAMASPQKQLITPETAGASGAQEVNTAAGAITTIAGLFSSNSTLEPKYAELWVGLGAVSALVSSLEGHAAFDRTVPVTGDLPLCFLLVSTSLLAGAADAVSEEDKIRLGTAWLQLFVDARSWIAQEAGDHLADFYVRPNWLNGVVDQIPTEARQRAVEAARKSEAEGT------WKSGRADHLATAL-----------GLALGRRCAGPGCVK---------------------DGV-----KRCSRCQGVRYCSMECQAGHWRKGHRKACTS 349
            S    K+W+ELRKLR+   PP+++   + K        Y D+ A+ ACNEVR  +G  S LPRD+FLA+F  LVAGPR++ELL LF+ S+S  HPAL+YACL+ALHG AELS+ R+ +++  ++   L + MASP+++L+TP +AGA G + VN AAGA+TTI GLF+SN  LEP YA+LWV LGAVSAL S LE HA FDR+ PV+GDLPLCF L++TSLLAGAAD+VSEEDK+RLG AWL +F++A  WIA EA D LADFY RPNWL  +V+++P + R  AV AAR+ E EGT      WK G+AD LA AL           G  +GRRCAGP C +                     DG      KRCS+C  V YCS ECQ   W+K HRKAC++
Sbjct:    5 STSSSKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKACSA 405          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: A0A2Z6MNH5_TRISU (Uncharacterized protein n=4 Tax=Trifolium TaxID=3898 RepID=A0A2Z6MNH5_TRISU)

HSP 1 Score: 58.9 bits (141), Expect = 7.970e-6
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query:  313 CVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRKAC 347
            C   GVKRCSRC+ VRYCS ECQ  HW+ GH+  C
Sbjct:   77 CASRGVKRCSRCKSVRYCSTECQQSHWKSGHKDKC 111          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: UPI001920A997 (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001920A997)

HSP 1 Score: 57.0 bits (136), Expect = 3.690e-5
Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0
Query:  250 LADFYVRPNWLNGVVDQIPTEARQ-RAVEAARKSEAEGTWKSGRADHLATALGLALGRRCAGPGCVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRKACTSAAAV 353
            L  F++R  W   +  Q+  +     A E A  +E E ++  G      T   L    +C    C      RCSRC+ VRYCS +CQ  HWR+GH++ C  AA V
Sbjct:   22 LIGFFIRRQWRLSIARQVEIKRLMILASEEAAMAELEASFGYG------TVSVLQNYHQCV--VCYSRTTTRCSRCKAVRYCSTQCQXIHWRQGHKEECYPAAIV 118          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: A0A164TVR6_9AGAM (MYND-type domain-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164TVR6_9AGAM)

HSP 1 Score: 52.4 bits (124), Expect = 5.850e-5
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 0
Query:  306 RRCAGPGCVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRKACTS 349
            R CAG      G+K CSRC+ VRYCS +CQ  HW  GH++ C S
Sbjct:   72 RFCAGCFRPSVGLKVCSRCESVRYCSDQCQKRHWTHGHKEECIS 115          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: E1Z3N4_CHLVA (MYND-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3N4_CHLVA)

HSP 1 Score: 56.2 bits (134), Expect = 6.100e-5
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:  307 RCAGPGCVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRK 345
            RCAG G V   VK+C  C+ V YCS +CQA HWR+GHR+
Sbjct:  392 RCAGCGNVVSEVKKCGGCRAVAYCSCQCQARHWREGHRE 430          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: A0A835WL21_9CHLO (MYND-type domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WL21_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 9.100e-5
Identity = 26/60 (43.33%), Postives = 31/60 (51.67%), Query Frame = 0
Query:  306 RRCAGPGCVKDG----------VKRCSRCQGVRYCSMECQAGHWRKGHRKACTSAAAVLA 355
            R C  PGC   G          ++ C RC+ VRYCS+ CQA HWR GH   C   AA +A
Sbjct: 1438 RVCGNPGCEAFGSSSSSEAELDLRLCGRCKSVRYCSVACQAAHWRSGHGAVCARVAAAVA 1497          
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Match: A0A835SMH0_CHLIN (MYND-type domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SMH0_CHLIN)

HSP 1 Score: 55.5 bits (132), Expect = 9.530e-5
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query:  301 GLALGRRC-AGPGCVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRKACTSAAAVLA 355
            G+ +  RC A  G     +++CSRCQ VRYCS  CQ  HW  GH + C   AA LA
Sbjct:  533 GIKVCARCGAAAGAGGTRLRKCSRCQAVRYCSEACQTAHWAAGHERECKQLAAALA 588          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig807.16259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JNJ8_9PHAE4.770e-12652.24MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A2Z6MNH5_TRISU7.970e-662.86Uncharacterized protein n=4 Tax=Trifolium TaxID=38... [more]
UPI001920A9973.690e-534.29LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal h... [more]
A0A164TVR6_9AGAM5.850e-552.27MYND-type domain-containing protein n=2 Tax=Sistot... [more]
E1Z3N4_CHLVA6.100e-558.97MYND-type domain-containing protein n=1 Tax=Chlore... [more]
A0A835WL21_9CHLO9.100e-543.33MYND-type domain-containing protein n=1 Tax=Chlamy... [more]
A0A835SMH0_CHLIN9.530e-546.43MYND-type domain-containing protein n=1 Tax=Chlamy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 304..350
e-value: 6.0E-10
score: 40.8
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 307..350
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 313..347
e-value: 4.7E-8
score: 33.0
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 308..347
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 308..347
score: 11.006

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig807contigS-dermatodea_contig807:15639..16973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig807.16259.1mRNA_S-dermatodea_contig807.16259.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig807 15639..16973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig807.16259.1 ID=prot_S-dermatodea_contig807.16259.1|Name=mRNA_S-dermatodea_contig807.16259.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=356bp
MASAVCDKVWKELRKLREVPPLESPQDTYKYTDYQAYTACNEVRNLLGPC
SELPRDEFLAVFAGLVAGPRMEELLGLFRSSQSHPALRYACLLALHGAAE
LSEERELMVSHAELPSALLSAMASPQKQLITPETAGASGAQEVNTAAGAI
TTIAGLFSSNSTLEPKYAELWVGLGAVSALVSSLEGHAAFDRTVPVTGDL
PLCFLLVSTSLLAGAADAVSEEDKIRLGTAWLQLFVDARSWIAQEAGDHL
ADFYVRPNWLNGVVDQIPTEARQRAVEAARKSEAEGTWKSGRADHLATAL
GLALGRRCAGPGCVKDGVKRCSRCQGVRYCSMECQAGHWRKGHRKACTSA
AAVLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND